data_XLZ
# 
_chem_comp.id                                    XLZ 
_chem_comp.name                                  "7-[(1~{S})-1-[4-(3-azanylpropyl)-1,2,3-triazol-1-yl]ethyl]-3-[3-chloranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H26 Cl N5 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-08 
_chem_comp.pdbx_modified_date                    2024-06-21 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        516.012 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XLZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8PA8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XLZ C10  C1  C  0 1 Y N N N N N -20.385 -11.031 8.103  -3.221 1.178  -1.135 C10  XLZ 1  
XLZ C11  C2  C  0 1 Y N N N N N -19.868 -11.156 6.821  -4.522 0.729  -1.234 C11  XLZ 2  
XLZ C12  C3  C  0 1 Y N N N N N -20.212 -12.242 6.037  -4.864 -0.521 -0.750 C12  XLZ 3  
XLZ C15  C4  C  0 1 N N N N N N -20.742 -9.796  3.772  -8.860 -1.185 0.272  C15  XLZ 4  
XLZ C18  C5  C  0 1 Y N N N N N -21.088 -13.177 6.568  -3.905 -1.329 -0.163 C18  XLZ 5  
XLZ C13  C6  C  0 1 N N N N N N -19.633 -12.383 4.617  -6.287 -1.005 -0.862 C13  XLZ 6  
XLZ C01  C7  C  0 1 N N N N N N -22.674 -12.522 15.834 4.537  2.163  -2.020 C01  XLZ 7  
XLZ C02  C8  C  0 1 N N S N N N -23.237 -12.071 14.490 3.888  1.548  -0.778 C02  XLZ 8  
XLZ C03  C9  C  0 1 Y N N N N N -22.629 -12.836 13.285 2.693  0.728  -1.190 C03  XLZ 9  
XLZ C04  C10 C  0 1 Y N N N N N -22.282 -14.177 13.349 2.851  -0.340 -2.045 C04  XLZ 10 
XLZ C05  C11 C  0 1 Y N N N N N -21.724 -14.802 12.238 1.759  -1.105 -2.433 C05  XLZ 11 
XLZ C06  C12 C  0 1 Y N N N N N -21.506 -14.106 11.054 0.507  -0.810 -1.972 C06  XLZ 12 
XLZ C07  C13 C  0 1 Y N N N N N -21.858 -12.757 10.971 0.324  0.268  -1.103 C07  XLZ 13 
XLZ C08  C14 C  0 1 Y N N N N N -21.782 -11.792 9.940  -0.852 0.843  -0.438 C08  XLZ 14 
XLZ C09  C15 C  0 1 Y N N N N N -21.283 -11.958 8.632  -2.249 0.369  -0.544 C09  XLZ 15 
XLZ C20  C16 C  0 1 Y N N N N N -21.621 -13.045 7.850  -2.600 -0.891 -0.057 C20  XLZ 16 
XLZ C21  C17 C  0 1 Y N N N N N -22.328 -10.636 10.504 -0.395 1.916  0.306  C21  XLZ 17 
XLZ C22  C18 C  0 1 N N N N N N -22.497 -9.274  9.856  -1.227 2.790  1.138  C22  XLZ 18 
XLZ C26  C19 C  0 1 Y N N N N N -22.409 -12.147 12.076 1.427  1.044  -0.702 C26  XLZ 19 
XLZ C28  C20 C  0 1 Y N N N N N -25.546 -12.924 15.067 5.805  -0.070 -0.694 C28  XLZ 20 
XLZ C29  C21 C  0 1 Y N N N N N -26.824 -12.601 14.609 6.478  -0.690 0.304  C29  XLZ 21 
XLZ C30  C22 C  0 1 N N N N N N -28.179 -13.173 15.031 7.635  -1.644 0.154  C30  XLZ 22 
XLZ C31  C23 C  0 1 N N N N N N -28.142 -14.108 16.232 8.820  -1.141 0.982  C31  XLZ 23 
XLZ C32  C24 C  0 1 N N N N N N -29.502 -14.771 16.471 9.995  -2.109 0.830  C32  XLZ 24 
XLZ N25  N1  N  0 1 Y N N N N N -22.664 -10.867 11.757 0.970  2.030  0.139  N25  XLZ 25 
XLZ N27  N2  N  0 1 Y N N N N N -24.691 -12.154 14.404 4.858  0.689  -0.095 N27  XLZ 26 
XLZ N33  N3  N  0 1 N N N N N N -29.405 -15.843 17.443 11.133 -1.627 1.624  N33  XLZ 27 
XLZ N34  N4  N  0 1 Y N N N N N -26.711 -11.657 13.689 5.913  -0.290 1.449  N34  XLZ 28 
XLZ N35  N5  N  0 1 Y N N N N N -25.395 -11.364 13.543 4.957  0.526  1.178  N35  XLZ 29 
XLZ O16  O1  O  0 1 N N N N N N -22.025 -12.103 3.363  -7.299 0.906  0.646  O16  XLZ 30 
XLZ O17  O2  O  0 1 N N N N N N -20.193 -11.752 1.998  -6.670 -1.195 1.740  O17  XLZ 31 
XLZ O23  O3  O  0 1 N N N N N N -22.889 -9.268  8.653  -2.425 2.598  1.213  O23  XLZ 32 
XLZ O24  O4  O  0 1 N N N N N N -22.342 -8.218  10.550 -0.663 3.809  1.820  O24  XLZ 33 
XLZ S14  S1  S  0 1 N N N N N N -20.673 -11.551 3.363  -7.212 -0.512 0.618  S14  XLZ 34 
XLZ CL19 CL1 CL 0 0 N N N N N N -21.536 -14.570 5.580  -4.345 -2.896 0.441  CL19 XLZ 35 
XLZ H101 H1  H  0 0 N N N N N N -20.083 -10.190 8.710  -2.955 2.152  -1.517 H101 XLZ 36 
XLZ H111 H2  H  0 0 N N N N N N -19.196 -10.404 6.435  -5.274 1.355  -1.691 H111 XLZ 37 
XLZ H151 H3  H  0 0 N N N N N N -21.106 -9.673  4.803  -9.529 -0.954 1.101  H151 XLZ 38 
XLZ H153 H4  H  0 0 N N N N N N -19.736 -9.359  3.684  -9.250 -0.740 -0.644 H153 XLZ 39 
XLZ H152 H5  H  0 0 N N N N N N -21.426 -9.285  3.079  -8.793 -2.266 0.151  H152 XLZ 40 
XLZ H132 H6  H  0 0 N N N N N N -19.563 -13.452 4.367  -6.752 -0.566 -1.745 H132 XLZ 41 
XLZ H131 H7  H  0 0 N N N N N N -18.628 -11.936 4.598  -6.295 -2.092 -0.950 H131 XLZ 42 
XLZ H011 H8  H  0 0 N N N N N N -23.145 -11.943 16.642 3.816  2.802  -2.528 H011 XLZ 43 
XLZ H012 H9  H  0 0 N N N N N N -22.884 -13.592 15.979 5.402  2.757  -1.722 H012 XLZ 44 
XLZ H013 H10 H  0 0 N N N N N N -21.587 -12.357 15.850 4.857  1.369  -2.694 H013 XLZ 45 
XLZ H021 H11 H  0 0 N N N N N N -22.956 -11.015 14.365 3.569  2.343  -0.104 H021 XLZ 46 
XLZ H041 H12 H  0 0 N N N N N N -22.444 -14.735 14.259 3.834  -0.585 -2.419 H041 XLZ 47 
XLZ H051 H13 H  0 0 N N N N N N -21.455 -15.846 12.296 1.900  -1.938 -3.105 H051 XLZ 48 
XLZ H061 H14 H  0 0 N N N N N N -21.067 -14.606 10.203 -0.338 -1.409 -2.278 H061 XLZ 49 
XLZ H201 H15 H  0 0 N N N N N N -22.299 -13.794 8.232  -1.853 -1.521 0.402  H201 XLZ 50 
XLZ H281 H16 H  0 0 N N N N N N -25.299 -13.660 15.818 5.991  -0.159 -1.754 H281 XLZ 51 
XLZ H302 H17 H  0 0 N N N N N N -28.843 -12.331 15.276 7.339  -2.632 0.506  H302 XLZ 52 
XLZ H301 H18 H  0 0 N N N N N N -28.594 -13.731 14.178 7.924  -1.703 -0.895 H301 XLZ 53 
XLZ H311 H19 H  0 0 N N N N N N -27.390 -14.890 16.053 9.116  -0.153 0.630  H311 XLZ 54 
XLZ H312 H20 H  0 0 N N N N N N -27.864 -13.530 17.126 8.531  -1.082 2.031  H312 XLZ 55 
XLZ H322 H21 H  0 0 N N N N N N -30.209 -14.014 16.842 9.699  -3.098 1.181  H322 XLZ 56 
XLZ H321 H22 H  0 0 N N N N N N -29.872 -15.183 15.520 10.284 -2.168 -0.220 H321 XLZ 57 
XLZ H251 H23 H  0 0 N N N N N N -23.052 -10.188 12.380 1.526  2.706  0.558  H251 XLZ 58 
XLZ H331 H24 H  0 0 N N N N N N -30.306 -16.255 17.577 11.922 -2.250 1.540  H331 XLZ 59 
XLZ H332 H26 H  0 0 N N N N N N -28.767 -16.538 17.110 11.385 -0.686 1.361  H332 XLZ 60 
XLZ H2   H27 H  0 1 N N N N N N -22.564 -7.458  10.025 -1.291 4.329  2.340  H2   XLZ 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XLZ O17  S14  DOUB N N 1  
XLZ S14  O16  DOUB N N 2  
XLZ S14  C15  SING N N 3  
XLZ S14  C13  SING N N 4  
XLZ C13  C12  SING N N 5  
XLZ CL19 C18  SING N N 6  
XLZ C12  C18  DOUB Y N 7  
XLZ C12  C11  SING Y N 8  
XLZ C18  C20  SING Y N 9  
XLZ C11  C10  DOUB Y N 10 
XLZ C20  C09  DOUB Y N 11 
XLZ C10  C09  SING Y N 12 
XLZ C09  C08  SING N N 13 
XLZ O23  C22  DOUB N N 14 
XLZ C22  C21  SING N N 15 
XLZ C22  O24  SING N N 16 
XLZ C08  C21  DOUB Y N 17 
XLZ C08  C07  SING Y N 18 
XLZ C21  N25  SING Y N 19 
XLZ C07  C06  DOUB Y N 20 
XLZ C07  C26  SING Y N 21 
XLZ C06  C05  SING Y N 22 
XLZ N25  C26  SING Y N 23 
XLZ C26  C03  DOUB Y N 24 
XLZ C05  C04  DOUB Y N 25 
XLZ C03  C04  SING Y N 26 
XLZ C03  C02  SING N N 27 
XLZ N35  N34  DOUB Y N 28 
XLZ N35  N27  SING Y N 29 
XLZ N34  C29  SING Y N 30 
XLZ N27  C02  SING N N 31 
XLZ N27  C28  SING Y N 32 
XLZ C02  C01  SING N N 33 
XLZ C29  C30  SING N N 34 
XLZ C29  C28  DOUB Y N 35 
XLZ C30  C31  SING N N 36 
XLZ C31  C32  SING N N 37 
XLZ C32  N33  SING N N 38 
XLZ C10  H101 SING N N 39 
XLZ C11  H111 SING N N 40 
XLZ C15  H151 SING N N 41 
XLZ C15  H153 SING N N 42 
XLZ C15  H152 SING N N 43 
XLZ C13  H132 SING N N 44 
XLZ C13  H131 SING N N 45 
XLZ C01  H011 SING N N 46 
XLZ C01  H012 SING N N 47 
XLZ C01  H013 SING N N 48 
XLZ C02  H021 SING N N 49 
XLZ C04  H041 SING N N 50 
XLZ C05  H051 SING N N 51 
XLZ C06  H061 SING N N 52 
XLZ C20  H201 SING N N 53 
XLZ C28  H281 SING N N 54 
XLZ C30  H302 SING N N 55 
XLZ C30  H301 SING N N 56 
XLZ C31  H311 SING N N 57 
XLZ C31  H312 SING N N 58 
XLZ C32  H322 SING N N 59 
XLZ C32  H321 SING N N 60 
XLZ N25  H251 SING N N 61 
XLZ N33  H331 SING N N 62 
XLZ N33  H332 SING N N 63 
XLZ O24  H2   SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XLZ InChI            InChI                1.06  "InChI=1S/C24H26ClN5O4S/c1-14(30-12-17(28-29-30)5-4-10-26)18-6-3-7-19-21(23(24(31)32)27-22(18)19)15-8-9-16(20(25)11-15)13-35(2,33)34/h3,6-9,11-12,14,27H,4-5,10,13,26H2,1-2H3,(H,31,32)/t14-/m0/s1" 
XLZ InChIKey         InChI                1.06  KDTZTJQZIZYAAU-AWEZNQCLSA-N                                                                                                                                                                         
XLZ SMILES_CANONICAL CACTVS               3.385 "C[C@H](n1cc(CCCN)nn1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(Cl)c4"                                                                                                                          
XLZ SMILES           CACTVS               3.385 "C[CH](n1cc(CCCN)nn1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(Cl)c4"                                                                                                                           
XLZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](c1cccc2c1[nH]c(c2c3ccc(c(c3)Cl)CS(=O)(=O)C)C(=O)O)n4cc(nn4)CCCN"                                                                                                                           
XLZ SMILES           "OpenEye OEToolkits" 2.0.7 "CC(c1cccc2c1[nH]c(c2c3ccc(c(c3)Cl)CS(=O)(=O)C)C(=O)O)n4cc(nn4)CCCN"                                                                                                                                
# 
_pdbx_chem_comp_identifier.comp_id           XLZ 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "7-[(1~{S})-1-[4-(3-azanylpropyl)-1,2,3-triazol-1-yl]ethyl]-3-[3-chloranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XLZ "Create component" 2023-06-08 PDBE 
XLZ "Initial release"  2024-06-26 RCSB 
# 
