data_SVZ
# 
_chem_comp.id                                    SVZ 
_chem_comp.name                                  "O-[(S)-HYDROXY(ISOPROPYLAMINO)PHOSPHORYL]-L-SERINE" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C6 H15 N2 O5 P" 
_chem_comp.mon_nstd_parent_comp_id               SER 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2007-02-13 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        226.167 
_chem_comp.one_letter_code                       S 
_chem_comp.three_letter_code                     SVZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        "OpenEye/OEToolkits V1.4.2" 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2JGK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              N 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SVZ N    N    N 0 1 N N N N N N 26.158 12.354 14.294 -0.787 4.645  -2.191 N    SVZ 1  
SVZ CA   CA   C 0 1 N N S N N N 27.268 12.589 13.351 -0.800 4.032  -0.885 CA   SVZ 2  
SVZ C    C    C 0 1 N N N N N N 28.520 11.774 13.725 -1.041 5.133  0.127  C    SVZ 3  
SVZ O    O    O 0 1 N N N N N N 28.450 10.554 13.763 -0.606 6.275  0.043  O    SVZ 4  
SVZ CB   CB   C 0 1 N N N N N N 27.553 14.086 13.181 0.507  3.311  -0.590 CB   SVZ 5  
SVZ OG   OG   O 0 1 N N N N N N 28.416 14.332 12.069 0.453  2.767  0.718  OG   SVZ 6  
SVZ O4   O4   O 0 1 N N N N N N 30.129 15.278 13.522 1.548  1.641  2.782  O4   SVZ 7  
SVZ P1   P1   P 0 1 N N R N N N 29.254 15.676 12.350 1.717  1.935  1.314  P1   SVZ 8  
SVZ O2   O2   O 0 1 N N N N N N 29.100 17.151 12.005 2.949  2.963  1.056  O2   SVZ 9  
SVZ N3   N3   N 0 1 N N N N N N 29.804 14.789 10.951 1.985  0.631  0.326  N3   SVZ 10 
SVZ C5   C5   C 0 1 N N N N N N 29.731 15.461 9.664  0.980  -0.420 0.267  C5   SVZ 11 
SVZ C7   C7   C 0 1 N N N N N N 31.135 15.731 9.152  1.275  -1.453 1.344  C7   SVZ 12 
SVZ C6   C6   C 0 1 N N N N N N 28.904 14.664 8.656  0.992  -1.037 -1.124 C6   SVZ 13 
SVZ OXT  OXT  O 0 1 N Y N N N N 29.650 12.414 14.015 -1.768 4.696  1.188  OXT  SVZ 14 
SVZ HN1  1HN  H 0 1 N N N N N N 26.444 12.534 15.256 -0.817 5.647  -2.259 HN1  SVZ 15 
SVZ HN2  2HN  H 0 1 N N N N N N 25.329 12.894 14.046 -0.952 4.070  -3.000 HN2  SVZ 16 
SVZ HA   HA   H 0 1 N N N N N N 26.948 12.215 12.350 -1.650 3.342  -0.898 HA   SVZ 17 
SVZ HBC1 1HBC H 0 0 N N N N N N 27.958 14.533 14.119 1.355  4.003  -0.630 HBC1 SVZ 18 
SVZ HBC2 2HBC H 0 0 N N N N N N 26.609 14.675 13.103 0.689  2.498  -1.301 HBC2 SVZ 19 
SVZ HOT  HOT  H 0 1 N N N N N N 30.422 11.911 14.246 -1.924 5.363  1.891  HOT  SVZ 20 
SVZ H2   H2   H 0 1 N N N N N N 29.595 17.945 12.171 3.017  3.765  1.616  H2   SVZ 21 
SVZ H3   H3   H 0 1 N N N N N N 29.307 13.900 10.897 2.901  0.192  0.417  H3   SVZ 22 
SVZ H5   H5   H 0 1 N N N N N N 29.207 16.436 9.799  0.002  0.037  0.455  H5   SVZ 23 
SVZ H7C1 1H7C H 0 0 N N N N N N 31.753 14.804 9.109  0.525  -2.250 1.336  H7C1 SVZ 24 
SVZ H7C2 2H7C H 0 0 N N N N N N 31.750 16.298 9.889  2.261  -1.911 1.200  H7C2 SVZ 25 
SVZ H7C3 3H7C H 0 0 N N N N N N 31.079 16.246 8.165  1.269  -0.991 2.338  H7C3 SVZ 26 
SVZ H6C1 1H6C H 0 0 N N N N N N 27.888 14.436 9.054  0.786  -0.278 -1.887 H6C1 SVZ 27 
SVZ H6C2 2H6C H 0 0 N N N N N N 29.287 13.622 8.549  0.232  -1.820 -1.210 H6C2 SVZ 28 
SVZ H6C3 3H6C H 0 0 N N N N N N 28.848 15.179 7.669  1.967  -1.480 -1.356 H6C3 SVZ 29 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SVZ N   CA   SING N N 1  
SVZ CA  C    SING N N 2  
SVZ C   O    DOUB N N 3  
SVZ CA  CB   SING N N 4  
SVZ CB  OG   SING N N 5  
SVZ OG  P1   SING N N 6  
SVZ O4  P1   DOUB N N 7  
SVZ P1  O2   SING N N 8  
SVZ P1  N3   SING N N 9  
SVZ N3  C5   SING N N 10 
SVZ C5  C7   SING N N 11 
SVZ C5  C6   SING N N 12 
SVZ C   OXT  SING N N 13 
SVZ N   HN1  SING N N 14 
SVZ N   HN2  SING N N 15 
SVZ CA  HA   SING N N 16 
SVZ CB  HBC1 SING N N 17 
SVZ CB  HBC2 SING N N 18 
SVZ OXT HOT  SING N N 19 
SVZ O2  H2   SING N N 20 
SVZ N3  H3   SING N N 21 
SVZ C5  H5   SING N N 22 
SVZ C7  H7C1 SING N N 23 
SVZ C7  H7C2 SING N N 24 
SVZ C7  H7C3 SING N N 25 
SVZ C6  H6C1 SING N N 26 
SVZ C6  H6C2 SING N N 27 
SVZ C6  H6C3 SING N N 28 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SVZ SMILES           ACDLabs              10.04 "O=P(O)(OCC(N)C(=O)O)NC(C)C"                                                                             
SVZ SMILES_CANONICAL CACTVS               3.341 "CC(C)N[P@](O)(=O)OC[C@H](N)C(O)=O"                                                                      
SVZ SMILES           CACTVS               3.341 "CC(C)N[P](O)(=O)OC[CH](N)C(O)=O"                                                                        
SVZ SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)N[P@@](=O)(O)OC[C@@H](C(=O)O)N"                                                                    
SVZ SMILES           "OpenEye OEToolkits" 1.5.0 "CC(C)NP(=O)(O)OCC(C(=O)O)N"                                                                             
SVZ InChI            InChI                1.03  "InChI=1S/C6H15N2O5P/c1-4(2)8-14(11,12)13-3-5(7)6(9)10/h4-5H,3,7H2,1-2H3,(H,9,10)(H2,8,11,12)/t5-/m0/s1" 
SVZ InChIKey         InChI                1.03  UFRVALQULWCEQX-YFKPBYRVSA-N                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SVZ "SYSTEMATIC NAME" ACDLabs              10.04 "O-{(R)-hydroxy[(1-methylethyl)amino]phosphoryl}-L-serine"                
SVZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-3-[hydroxy-(propan-2-ylamino)phosphoryl]oxy-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SVZ "Create component"              2007-02-13 RCSB 
SVZ "Modify descriptor"             2011-06-04 RCSB 
SVZ "Modify parent residue"         2015-01-20 EBI  
SVZ "Modify one letter code"        2015-01-20 EBI  
SVZ "Modify model coordinates code" 2015-01-20 EBI  
SVZ "Modify name"                   2015-01-20 EBI  
SVZ "Modify leaving atom flag"      2015-01-20 EBI  
SVZ "Modify PCM"                    2024-09-27 PDBE 
# 
