data_QVZ
#

_chem_comp.id                                   QVZ
_chem_comp.name                                 "3-((9,9-dimethyl-9H-fluoren-2-yl)methyl)-2-oxoglutarate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H20 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(3~{S})-3-[(9,9-dimethylfluoren-2-yl)methyl]-2-oxidanylidene-pentanedioic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-08-14
_chem_comp.pdbx_modified_date                   2021-08-20
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       352.381
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    QVZ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7A1K
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
QVZ  C10  C1   C  0  1  Y  N  N  19.155  24.542  32.011  -0.367   1.258   0.675  C10  QVZ   1  
QVZ  C13  C2   C  0  1  N  N  N  18.316  25.041  34.419  -2.813   1.574  -0.266  C13  QVZ   2  
QVZ  C15  C3   C  0  1  Y  N  N  21.134  25.695  37.550  -5.623  -1.619  -0.167  C15  QVZ   3  
QVZ  C17  C4   C  0  1  Y  N  N  18.802  25.579  36.905  -5.234   0.661  -0.795  C17  QVZ   4  
QVZ  C20  C5   C  0  1  N  N  N  22.295  25.356  28.272   2.047  -1.623  -0.797  C20  QVZ   5  
QVZ  C21  C6   C  0  1  N  N  N  17.386  25.351  28.788   5.095   0.941  -0.515  C21  QVZ   6  
QVZ  C01  C7   C  0  1  N  N  N  21.182  25.882  28.818   2.929  -0.958   0.205  C01  QVZ   7  
QVZ  C02  C8   C  0  1  N  N  S  19.887  25.107  28.762   2.836   0.530   0.421  C02  QVZ   8  
QVZ  C03  C9   C  0  1  N  N  N  19.978  24.025  29.702   1.914   0.816   1.608  C03  QVZ   9  
QVZ  C04  C10  C  0  1  N  N  N  18.719  25.995  29.130   4.229   1.092   0.710  C04  QVZ  10  
QVZ  C05  C11  C  0  1  Y  N  N  20.231  24.353  31.150   0.513   0.373   1.274  C05  QVZ  11  
QVZ  C06  C12  C  0  1  Y  N  N  21.521  24.445  31.660   0.108  -0.916   1.568  C06  QVZ  12  
QVZ  C07  C13  C  0  1  Y  N  N  21.729  24.731  33.022  -1.173  -1.328   1.266  C07  QVZ  13  
QVZ  C08  C14  C  0  1  Y  N  N  20.630  24.924  33.886  -2.066  -0.442   0.661  C08  QVZ  14  
QVZ  C09  C15  C  0  1  Y  N  N  19.369  24.822  33.360  -1.649   0.854   0.370  C09  QVZ  15  
QVZ  C11  C16  C  0  1  Y  N  N  20.541  25.212  35.251  -3.477  -0.615   0.235  C11  QVZ  16  
QVZ  C12  C17  C  0  1  Y  N  N  19.202  25.300  35.606  -3.941   0.573  -0.323  C12  QVZ  17  
QVZ  C14  C18  C  0  1  Y  N  N  21.528  25.413  36.239  -4.332  -1.716   0.310  C14  QVZ  18  
QVZ  C16  C19  C  0  1  Y  N  N  19.777  25.777  37.880  -6.075  -0.435  -0.719  C16  QVZ  19  
QVZ  C18  C20  C  0  1  N  N  N  17.400  26.131  34.098  -3.223   2.781   0.581  C18  QVZ  20  
QVZ  C19  C21  C  0  1  N  N  N  17.359  23.792  34.636  -2.437   2.026  -1.678  C19  QVZ  21  
QVZ  O01  O1   O  0  1  N  N  N  21.224  26.974  29.350   3.719  -1.613   0.842  O01  QVZ  22  
QVZ  O02  O2   O  0  1  N  N  N  23.364  25.893  28.380   2.179  -2.940  -1.041  O02  QVZ  23  
QVZ  O03  O3   O  0  1  N  N  N  22.210  24.219  27.575   1.210  -0.977  -1.391  O03  QVZ  24  
QVZ  O04  O4   O  0  1  N  N  N  17.252  24.685  27.789   4.615   0.541  -1.549  O04  QVZ  25  
QVZ  O05  O5   O  0  1  N  N  N  16.326  25.555  29.565   6.400   1.252  -0.456  O05  QVZ  26  
QVZ  H08  H1   H  0  1  N  N  N  18.146  24.471  31.632  -0.050   2.266   0.451  H08  QVZ  27  
QVZ  H10  H2   H  0  1  N  N  N  21.882  25.851  38.313  -6.282  -2.473  -0.110  H10  QVZ  28  
QVZ  H12  H3   H  0  1  N  N  N  17.753  25.642  37.156  -5.589   1.585  -1.227  H12  QVZ  29  
QVZ  H01  H4   H  0  1  N  N  N  19.740  24.718  27.744   2.432   1.003  -0.475  H01  QVZ  30  
QVZ  H02  H5   H  0  1  N  N  N  19.028  23.473  29.655   2.269   0.271   2.483  H02  QVZ  31  
QVZ  H03  H6   H  0  1  N  N  N  20.798  23.373  29.368   1.917   1.885   1.820  H03  QVZ  32  
QVZ  H04  H7   H  0  1  N  N  N  18.751  26.194  30.211   4.676   0.545   1.540  H04  QVZ  33  
QVZ  H05  H8   H  0  1  N  N  N  18.807  26.944  28.580   4.149   2.147   0.970  H05  QVZ  34  
QVZ  H06  H9   H  0  1  N  N  N  22.368  24.296  31.007   0.798  -1.603   2.035  H06  QVZ  35  
QVZ  H07  H10  H  0  1  N  N  N  22.735  24.803  33.408  -1.485  -2.336   1.496  H07  QVZ  36  
QVZ  H09  H11  H  0  1  N  N  N  22.576  25.350  35.985  -3.983  -2.642   0.741  H09  QVZ  37  
QVZ  H11  H12  H  0  1  N  N  N  19.484  25.995  38.896  -7.086  -0.365  -1.092  H11  QVZ  38  
QVZ  H14  H13  H  0  1  N  N  N  16.660  26.239  34.905  -4.073   3.280   0.116  H14  QVZ  39  
QVZ  H13  H14  H  0  1  N  N  N  17.967  27.068  33.993  -3.500   2.446   1.581  H13  QVZ  40  
QVZ  H15  H15  H  0  1  N  N  N  16.882  25.908  33.154  -2.387   3.477   0.650  H15  QVZ  41  
QVZ  H18  H16  H  0  1  N  N  N  16.622  24.026  35.419  -3.294   2.512  -2.145  H18  QVZ  42  
QVZ  H16  H17  H  0  1  N  N  N  16.835  23.564  33.696  -1.605   2.728  -1.626  H16  QVZ  43  
QVZ  H17  H18  H  0  1  N  N  N  17.957  22.921  34.944  -2.144   1.159  -2.271  H17  QVZ  44  
QVZ  H1   H19  H  0  1  N  N  N  24.022  25.385  27.919   1.585  -3.326  -1.699  H1   QVZ  45  
QVZ  H2   H20  H  0  1  N  N  N  15.570  25.116  29.192   6.915   1.139  -1.267  H2   QVZ  46  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
QVZ  O03  C20  DOUB  N  N   1  
QVZ  O04  C21  DOUB  N  N   2  
QVZ  C20  O02  SING  N  N   3  
QVZ  C20  C01  SING  N  N   4  
QVZ  C02  C01  SING  N  N   5  
QVZ  C02  C04  SING  N  N   6  
QVZ  C02  C03  SING  N  N   7  
QVZ  C21  C04  SING  N  N   8  
QVZ  C21  O05  SING  N  N   9  
QVZ  C01  O01  DOUB  N  N  10  
QVZ  C03  C05  SING  N  N  11  
QVZ  C05  C06  DOUB  Y  N  12  
QVZ  C05  C10  SING  Y  N  13  
QVZ  C06  C07  SING  Y  N  14  
QVZ  C10  C09  DOUB  Y  N  15  
QVZ  C07  C08  DOUB  Y  N  16  
QVZ  C09  C08  SING  Y  N  17  
QVZ  C09  C13  SING  N  N  18  
QVZ  C08  C11  SING  N  N  19  
QVZ  C18  C13  SING  N  N  20  
QVZ  C13  C19  SING  N  N  21  
QVZ  C13  C12  SING  N  N  22  
QVZ  C11  C12  DOUB  Y  N  23  
QVZ  C11  C14  SING  Y  N  24  
QVZ  C12  C17  SING  Y  N  25  
QVZ  C14  C15  DOUB  Y  N  26  
QVZ  C17  C16  DOUB  Y  N  27  
QVZ  C15  C16  SING  Y  N  28  
QVZ  C10  H08  SING  N  N  29  
QVZ  C15  H10  SING  N  N  30  
QVZ  C17  H12  SING  N  N  31  
QVZ  C02  H01  SING  N  N  32  
QVZ  C03  H02  SING  N  N  33  
QVZ  C03  H03  SING  N  N  34  
QVZ  C04  H04  SING  N  N  35  
QVZ  C04  H05  SING  N  N  36  
QVZ  C06  H06  SING  N  N  37  
QVZ  C07  H07  SING  N  N  38  
QVZ  C14  H09  SING  N  N  39  
QVZ  C16  H11  SING  N  N  40  
QVZ  C18  H14  SING  N  N  41  
QVZ  C18  H13  SING  N  N  42  
QVZ  C18  H15  SING  N  N  43  
QVZ  C19  H18  SING  N  N  44  
QVZ  C19  H16  SING  N  N  45  
QVZ  C19  H17  SING  N  N  46  
QVZ  O02  H1   SING  N  N  47  
QVZ  O05  H2   SING  N  N  48  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
QVZ  InChI             InChI                 1.03   "InChI=1S/C21H20O5/c1-21(2)16-6-4-3-5-14(16)15-8-7-12(10-17(15)21)9-13(11-18(22)23)19(24)20(25)26/h3-8,10,13H,9,11H2,1-2H3,(H,22,23)(H,25,26)/t13-/m0/s1"  
QVZ  InChIKey          InChI                 1.03   VBQHCGIHMLAMOB-ZDUSSCGKSA-N  
QVZ  SMILES_CANONICAL  CACTVS                3.385  "CC1(C)c2ccccc2c3ccc(C[C@@H](CC(O)=O)C(=O)C(O)=O)cc13"  
QVZ  SMILES            CACTVS                3.385  "CC1(C)c2ccccc2c3ccc(C[CH](CC(O)=O)C(=O)C(O)=O)cc13"  
QVZ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC1(c2ccccc2-c3c1cc(cc3)C[C@@H](CC(=O)O)C(=O)C(=O)O)C"  
QVZ  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1(c2ccccc2-c3c1cc(cc3)CC(CC(=O)O)C(=O)C(=O)O)C"  
#
_pdbx_chem_comp_identifier.comp_id          QVZ
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(3~{S})-3-[(9,9-dimethylfluoren-2-yl)methyl]-2-oxidanylidene-pentanedioic acid"
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     QVZ
_pdbx_chem_comp_synonyms.name        "(3~{S})-3-[(9,9-dimethylfluoren-2-yl)methyl]-2-oxidanylidene-pentanedioic acid"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
QVZ  "Create component"  2020-08-14  PDBE  
QVZ  "Modify synonyms"   2021-03-13  RCSB  
QVZ  "Initial release"   2021-08-25  RCSB  
##
