data_PKZ
# 
_chem_comp.id                                    PKZ 
_chem_comp.name                                  Palmitoyl-CoA 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C37 H66 N7 O17 P3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-09-29 
_chem_comp.pdbx_modified_date                    2025-06-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        1005.943 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     PKZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5DV5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
PKZ C3  C1  C 0 1 N N N N N N 18.804 21.290 7.571  -10.666 -1.560 0.332  C3  PKZ 1   
PKZ C1  C2  C 0 1 N N N N N N 19.802 23.533 7.910  -8.551  -2.845 0.497  C1  PKZ 2   
PKZ C10 C3  C 0 1 N N N N N N 22.517 16.676 3.485  -18.431 2.553  0.522  C10 PKZ 3   
PKZ C8  C4  C 0 1 N N N N N N 22.844 16.943 5.971  -16.296 1.264  0.678  C8  PKZ 4   
PKZ C7  C5  C 0 1 N N N N N N 22.692 18.443 6.280  -14.936 1.016  0.022  C7  PKZ 5   
PKZ C5  C6  C 0 1 N N N N N N 20.704 19.670 7.207  -12.801 -0.272 0.177  C5  PKZ 6   
PKZ C11 C7  C 0 1 N N N N N N 22.696 17.871 2.532  -19.206 3.593  -0.289 C11 PKZ 7   
PKZ C13 C8  C 0 1 N N N N N N 23.752 18.403 0.288  -21.341 4.881  -0.444 C13 PKZ 8   
PKZ C16 C9  C 0 1 N N N N N N 26.095 16.847 -2.328 -24.836 6.417  0.057  C16 PKZ 9   
PKZ C15 C10 C 0 1 N N N N N N 25.415 16.957 -0.970 -23.476 6.169  -0.599 C15 PKZ 10  
PKZ C14 C11 C 0 1 N N N N N N 24.130 17.831 -1.097 -22.701 5.129  0.212  C14 PKZ 11  
PKZ N1A N1  N 0 1 Y N N N N N 35.668 27.147 -0.864 7.145   8.761  -2.382 N1A PKZ 12  
PKZ C2A C12 C 0 1 Y N N N N N 34.701 28.080 -0.800 8.038   7.909  -2.852 C2A PKZ 13  
PKZ N3A N2  N 0 1 Y N N N N N 34.774 29.234 -1.471 8.250   6.732  -2.302 N3A PKZ 14  
PKZ C4A C13 C 0 1 Y N N N N N 35.842 29.506 -2.249 7.561   6.351  -1.231 C4A PKZ 15  
PKZ C5A C14 C 0 1 Y N N N N N 36.900 28.515 -2.335 6.599   7.222  -0.692 C5A PKZ 16  
PKZ C6A C15 C 0 1 Y N N N N N 36.758 27.346 -1.616 6.408   8.467  -1.316 C6A PKZ 17  
PKZ N6A N3  N 0 1 N N N N N N 37.766 26.357 -1.674 5.475   9.366  -0.831 N6A PKZ 18  
PKZ N7A N4  N 0 1 Y N N N N N 37.888 29.083 -3.230 6.049   6.598  0.377  N7A PKZ 19  
PKZ C8A C16 C 0 1 Y N N N N N 37.434 30.296 -3.622 6.600   5.428  0.526  C8A PKZ 20  
PKZ N9A N5  N 0 1 Y N N N N N 36.270 30.498 -3.047 7.539   5.229  -0.442 N9A PKZ 21  
PKZ C1B C17 C 0 1 N N R N N N 35.558 31.685 -3.268 8.371   4.035  -0.610 C1B PKZ 22  
PKZ C2B C18 C 0 1 N N R N N N 34.964 31.711 -4.624 9.706   4.199  0.150  C2B PKZ 23  
PKZ O2B O1  O 0 1 N N N N N N 35.826 32.460 -5.523 10.744  4.606  -0.744 O2B PKZ 24  
PKZ C3B C19 C 0 1 N N S N N N 33.676 32.372 -4.514 9.995   2.788  0.710  C3B PKZ 25  
PKZ O3B O2  O 0 1 N N N N N N 33.717 33.648 -5.235 11.221  2.280  0.179  O3B PKZ 26  
PKZ P3B P1  P 0 1 N N N N N N 32.384 34.535 -5.348 12.463  1.844  1.105  P3B PKZ 27  
PKZ O7A O3  O 0 1 N N N N N N 31.131 33.807 -5.034 12.042  0.577  2.005  O7A PKZ 28  
PKZ O8A O4  O 0 1 N N N N N N 32.362 35.720 -4.443 13.714  1.447  0.172  O8A PKZ 29  
PKZ O9A O5  O 0 1 N N N N N N 32.144 35.100 -6.694 12.843  2.971  1.986  O9A PKZ 30  
PKZ C4B C20 C 0 1 N N R N N N 33.421 32.611 -3.078 8.801   1.939  0.222  C4B PKZ 31  
PKZ O4B O6  O 0 1 N N N N N N 34.439 31.842 -2.310 7.737   2.890  0.002  O4B PKZ 32  
PKZ C5B C21 C 0 1 N N N N N N 32.051 32.161 -2.701 8.395   0.925  1.294  C5B PKZ 33  
PKZ O5B O7  O 0 1 N N N N N N 31.627 32.840 -1.493 7.369   0.074  0.781  O5B PKZ 34  
PKZ P1A P2  P 0 1 N N N N N N 32.292 32.411 -0.100 6.702   -1.112 1.641  P1A PKZ 35  
PKZ O1A O8  O 0 1 N N N N N N 31.558 32.985 1.060  5.900   -0.486 2.889  O1A PKZ 36  
PKZ O2A O9  O 0 1 N N N N N N 33.628 33.042 0.078  7.762   -2.016 2.140  O2A PKZ 37  
PKZ O3A O10 O 0 1 N N N N N N 32.383 30.820 -0.007 5.683   -1.942 0.711  O3A PKZ 38  
PKZ P2A P3  P 0 1 N N N N N N 31.155 29.817 -0.308 4.957   -3.373 0.847  P2A PKZ 39  
PKZ O4A O11 O 0 1 N N N N N N 31.595 28.656 -1.112 3.675   -3.235 1.811  O4A PKZ 40  
PKZ O5A O12 O 0 1 N N N N N N 30.152 30.422 -1.205 5.904   -4.354 1.423  O5A PKZ 41  
PKZ O6A O13 O 0 1 N N N N N N 30.481 29.337 1.071  4.483   -3.874 -0.608 O6A PKZ 42  
PKZ CBP C22 C 0 1 N N N N N N 28.433 29.927 2.212  3.567   -5.311 -2.322 CBP PKZ 43  
PKZ CCP C23 C 0 1 N N N N N N 29.891 30.319 1.914  3.899   -5.158 -0.836 CCP PKZ 44  
PKZ CDP C24 C 0 1 N N N N N N 28.123 30.245 3.683  2.578   -4.219 -2.738 CDP PKZ 45  
PKZ CEP C25 C 0 1 N N N N N N 27.483 30.735 1.293  4.848   -5.179 -3.147 CEP PKZ 46  
PKZ CAP C26 C 0 1 N N R N N N 28.232 28.409 1.955  2.941   -6.685 -2.567 CAP PKZ 47  
PKZ OAP O14 O 0 1 N N N N N N 29.355 27.709 2.373  3.910   -7.703 -2.305 OAP PKZ 48  
PKZ C9P C27 C 0 1 N N N N N N 27.037 27.920 2.735  1.759   -6.870 -1.650 C9P PKZ 49  
PKZ O9P O15 O 0 1 N N N N N N 25.908 28.233 2.394  1.808   -7.686 -0.755 O9P PKZ 50  
PKZ N8P N6  N 0 1 N N N N N N 27.244 27.073 3.894  0.648   -6.127 -1.826 N8P PKZ 51  
PKZ C7P C28 C 0 1 N N N N N N 26.113 26.597 4.654  -0.463  -6.237 -0.878 C7P PKZ 52  
PKZ C6P C29 C 0 1 N N N N N N 25.917 27.480 5.869  -1.592  -5.295 -1.304 C6P PKZ 53  
PKZ C5P C30 C 0 1 N N N N N N 25.102 26.698 6.906  -2.735  -5.407 -0.329 C5P PKZ 54  
PKZ O5P O16 O 0 1 N N N N N N 25.632 25.822 7.556  -2.656  -6.166 0.614  O5P PKZ 55  
PKZ N4P N7  N 0 1 N N N N N N 23.698 27.000 7.102  -3.846  -4.665 -0.505 N4P PKZ 56  
PKZ C3P C31 C 0 1 N N N N N N 22.931 26.252 8.076  -4.958  -4.774 0.443  C3P PKZ 57  
PKZ C2P C32 C 0 1 N N N N N N 21.916 25.409 7.329  -6.086  -3.833 0.017  C2P PKZ 58  
PKZ S1P S1  S 0 1 N N N N N N 21.495 23.961 8.268  -7.459  -3.968 1.188  S1P PKZ 59  
PKZ O1  O17 O 0 1 N N N N N N 19.174 24.178 7.105  -8.247  -2.246 -0.514 O1  PKZ 60  
PKZ C2  C33 C 0 1 N N N N N N 19.141 22.357 8.615  -9.891  -2.601 1.143  C2  PKZ 61  
PKZ C4  C34 C 0 1 N N N N N N 20.059 20.985 6.716  -12.026 -1.312 0.988  C4  PKZ 62  
PKZ C6  C35 C 0 1 N N N N N N 21.260 18.879 6.005  -14.161 -0.024 0.833  C6  PKZ 63  
PKZ C9  C36 C 0 1 N N N N N N 23.563 16.761 4.620  -17.071 2.304  -0.133 C9  PKZ 64  
PKZ C12 C37 C 0 1 N N N N N N 22.943 17.349 1.091  -20.566 3.841  0.367  C12 PKZ 65  
PKZ H1  H1  H 0 1 N N N N N N 17.997 21.657 6.919  -10.101 -0.628 0.302  H1  PKZ 66  
PKZ H2  H2  H 0 1 N N N N N N 18.475 20.372 8.079  -10.814 -1.928 -0.684 H2  PKZ 67  
PKZ H3  H3  H 0 1 N N N N N N 21.505 16.699 3.916  -18.283 2.920  1.538  H3  PKZ 68  
PKZ H4  H4  H 0 1 N N N N N N 22.656 15.738 2.927  -18.995 1.621  0.552  H4  PKZ 69  
PKZ H5  H5  H 0 1 N N N N N N 21.849 16.477 5.921  -16.860 0.332  0.707  H5  PKZ 70  
PKZ H6  H6  H 0 1 N N N N N N 23.434 16.464 6.766  -16.148 1.632  1.693  H6  PKZ 71  
PKZ H7  H7  H 0 1 N N N N N N 22.933 18.625 7.338  -15.084 0.649  -0.994 H7  PKZ 72  
PKZ H8  H8  H 0 1 N N N N N N 23.379 19.019 5.643  -14.372 1.948  -0.008 H8  PKZ 73  
PKZ H9  H9  H 0 1 N N N N N N 19.947 19.063 7.725  -12.236 0.660  0.147  H9  PKZ 74  
PKZ H10 H10 H 0 1 N N N N N N 21.524 19.903 7.902  -12.949 -0.640 -0.839 H10 PKZ 75  
PKZ H11 H11 H 0 1 N N N N N N 23.557 18.474 2.857  -18.642 4.525  -0.318 H11 PKZ 76  
PKZ H12 H12 H 0 1 N N N N N N 21.788 18.492 2.547  -19.354 3.225  -1.304 H12 PKZ 77  
PKZ H13 H13 H 0 1 N N N N N N 24.669 18.658 0.840  -21.490 4.513  -1.459 H13 PKZ 78  
PKZ H14 H14 H 0 1 N N N N N N 23.141 19.308 0.155  -20.777 5.813  -0.473 H14 PKZ 79  
PKZ H15 H15 H 0 1 N N N N N N 27.001 16.230 -2.236 -25.389 7.158  -0.521 H15 PKZ 80  
PKZ H16 H16 H 0 1 N N N N N N 25.405 16.380 -3.047 -25.401 5.485  0.087  H16 PKZ 81  
PKZ H17 H17 H 0 1 N N N N N N 26.370 17.851 -2.683 -24.688 6.785  1.073  H17 PKZ 82  
PKZ H18 H18 H 0 1 N N N N N N 25.141 15.952 -0.616 -23.625 5.802  -1.614 H18 PKZ 83  
PKZ H19 H19 H 0 1 N N N N N N 26.105 17.423 -0.252 -22.912 7.101  -0.628 H19 PKZ 84  
PKZ H20 H20 H 0 1 N N N N N N 24.318 18.659 -1.796 -23.266 4.197  0.242  H20 PKZ 85  
PKZ H21 H21 H 0 1 N N N N N N 23.303 17.213 -1.476 -22.553 5.497  1.228  H21 PKZ 86  
PKZ H22 H22 H 0 1 N N N N N N 33.834 27.890 -0.184 8.615   8.188  -3.721 H22 PKZ 87  
PKZ H23 H23 H 0 1 N N N N N N 37.506 25.581 -1.099 4.943   9.140  -0.052 H23 PKZ 88  
PKZ H24 H24 H 0 1 N N N N N N 37.877 26.049 -2.619 5.353   10.222 -1.270 H24 PKZ 89  
PKZ H25 H25 H 0 1 N N N N N N 37.939 30.978 -4.290 6.350   4.720  1.302  H25 PKZ 90  
PKZ H26 H26 H 0 1 N N N N N N 36.233 32.547 -3.164 8.555   3.847  -1.668 H26 PKZ 91  
PKZ H27 H27 H 0 1 N N N N N N 34.833 30.683 -4.993 9.597   4.918  0.962  H27 PKZ 92  
PKZ H28 H28 H 0 1 N N N N N N 36.667 32.024 -5.592 10.613  5.484  -1.125 H28 PKZ 93  
PKZ H29 H29 H 0 1 N N N N N N 32.885 31.731 -4.931 10.030  2.809  1.799  H29 PKZ 94  
PKZ H30 H30 H 0 1 N N N N N N 30.524 33.894 -5.759 11.781  -0.200 1.493  H30 PKZ 95  
PKZ H31 H31 H 0 1 N N N N N N 32.204 36.506 -4.953 14.500  1.173  0.664  H31 PKZ 96  
PKZ H32 H32 H 0 1 N N N N N N 33.528 33.683 -2.857 9.053   1.427  -0.706 H32 PKZ 97  
PKZ H33 H33 H 0 1 N N N N N N 31.352 32.396 -3.517 9.261   0.324  1.572  H33 PKZ 98  
PKZ H34 H34 H 0 1 N N N N N N 32.058 31.075 -2.526 8.024   1.454  2.172  H34 PKZ 99  
PKZ H35 H35 H 0 1 N N N N N N 32.136 33.559 1.548  5.189   0.118  2.636  H35 PKZ 100 
PKZ H36 H36 H 0 1 N N N N N N 31.121 28.643 -1.935 3.011   -2.607 1.495  H36 PKZ 101 
PKZ H37 H37 H 0 1 N N N N N N 30.455 30.380 2.857  4.603   -5.936 -0.540 H37 PKZ 102 
PKZ H38 H38 H 0 1 N N N N N N 29.913 31.296 1.410  2.986   -5.252 -0.249 H38 PKZ 103 
PKZ H39 H39 H 0 1 N N N N N N 28.799 29.670 4.333  3.063   -3.245 -2.672 H39 PKZ 104 
PKZ H40 H40 H 0 1 N N N N N N 28.267 31.320 3.864  2.254   -4.395 -3.764 H40 PKZ 105 
PKZ H41 H41 H 0 1 N N N N N N 27.081 29.972 3.905  1.713   -4.240 -2.075 H41 PKZ 106 
PKZ H42 H42 H 0 1 N N N N N N 26.441 30.455 1.506  5.326   -4.225 -2.927 H42 PKZ 107 
PKZ H43 H43 H 0 1 N N N N N N 27.619 31.810 1.480  5.529   -5.992 -2.894 H43 PKZ 108 
PKZ H44 H44 H 0 1 N N N N N N 27.715 30.513 0.241  4.604   -5.227 -4.208 H44 PKZ 109 
PKZ H45 H45 H 0 1 N N N N N N 28.050 28.256 0.881  2.612   -6.755 -3.603 H45 PKZ 110 
PKZ H46 H46 H 0 1 N N N N N N 29.228 26.781 2.214  4.248   -7.700 -1.399 H46 PKZ 111 
PKZ H47 H47 H 0 1 N N N N N N 28.172 26.818 4.167  0.585   -5.521 -2.580 H47 PKZ 112 
PKZ H48 H48 H 0 1 N N N N N N 25.210 26.629 4.027  -0.831  -7.262 -0.867 H48 PKZ 113 
PKZ H49 H49 H 0 1 N N N N N N 26.298 25.562 4.978  -0.119  -5.963 0.119  H49 PKZ 114 
PKZ H50 H50 H 0 1 N N N N N N 26.895 27.752 6.293  -1.224  -4.269 -1.316 H50 PKZ 115 
PKZ H51 H51 H 0 1 N N N N N N 25.375 28.393 5.582  -1.936  -5.569 -2.302 H51 PKZ 116 
PKZ H52 H52 H 0 1 N N N N N N 23.261 27.722 6.566  -3.910  -4.058 -1.259 H52 PKZ 117 
PKZ H53 H53 H 0 1 N N N N N N 23.600 25.601 8.658  -5.326  -5.800 0.454  H53 PKZ 118 
PKZ H54 H54 H 0 1 N N N N N N 22.413 26.945 8.755  -4.613  -4.501 1.440  H54 PKZ 119 
PKZ H55 H55 H 0 1 N N N N N N 21.008 26.005 7.157  -5.718  -2.807 0.005  H55 PKZ 120 
PKZ H56 H56 H 0 1 N N N N N N 22.342 25.102 6.362  -6.431  -4.106 -0.980 H56 PKZ 121 
PKZ H57 H57 H 0 1 N N N N N N 18.219 22.693 9.112  -9.742  -2.233 2.158  H57 PKZ 122 
PKZ H58 H58 H 0 1 N N N N N N 19.830 21.939 9.364  -10.455 -3.533 1.173  H58 PKZ 123 
PKZ H59 H59 H 0 1 N N N N N N 20.781 21.809 6.817  -12.590 -2.244 1.017  H59 PKZ 124 
PKZ H60 H60 H 0 1 N N N N N N 19.768 20.880 5.660  -11.877 -0.945 2.003  H60 PKZ 125 
PKZ H61 H61 H 0 1 N N N N N N 21.240 19.517 5.109  -14.013 0.344  1.848  H61 PKZ 126 
PKZ H62 H62 H 0 1 N N N N N N 20.636 17.989 5.835  -14.725 -0.956 0.862  H62 PKZ 127 
PKZ H63 H63 H 0 1 N N N N N N 24.156 15.835 4.642  -17.219 1.937  -1.149 H63 PKZ 128 
PKZ H64 H64 H 0 1 N N N N N N 24.229 17.618 4.441  -16.507 3.236  -0.163 H64 PKZ 129 
PKZ H65 H65 H 0 1 N N N N N N 21.977 17.173 0.595  -21.131 2.909  0.397  H65 PKZ 130 
PKZ H66 H66 H 0 1 N N N N N N 23.510 16.407 1.135  -20.418 4.208  1.383  H66 PKZ 131 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PKZ O9A P3B DOUB N N 1   
PKZ O2B C2B SING N N 2   
PKZ P3B O3B SING N N 3   
PKZ P3B O7A SING N N 4   
PKZ P3B O8A SING N N 5   
PKZ O3B C3B SING N N 6   
PKZ C2B C3B SING N N 7   
PKZ C2B C1B SING N N 8   
PKZ C3B C4B SING N N 9   
PKZ C8A N7A DOUB Y N 10  
PKZ C8A N9A SING Y N 11  
PKZ C1B N9A SING N N 12  
PKZ C1B O4B SING N N 13  
PKZ N7A C5A SING Y N 14  
PKZ C4B C5B SING N N 15  
PKZ C4B O4B SING N N 16  
PKZ N9A C4A SING Y N 17  
PKZ C5B O5B SING N N 18  
PKZ C5A C4A DOUB Y N 19  
PKZ C5A C6A SING Y N 20  
PKZ C16 C15 SING N N 21  
PKZ C4A N3A SING Y N 22  
PKZ N6A C6A SING N N 23  
PKZ C6A N1A DOUB Y N 24  
PKZ O5B P1A SING N N 25  
PKZ N3A C2A DOUB Y N 26  
PKZ O5A P2A DOUB N N 27  
PKZ O4A P2A SING N N 28  
PKZ C14 C15 SING N N 29  
PKZ C14 C13 SING N N 30  
PKZ N1A C2A SING Y N 31  
PKZ P2A O3A SING N N 32  
PKZ P2A O6A SING N N 33  
PKZ P1A O3A SING N N 34  
PKZ P1A O2A DOUB N N 35  
PKZ P1A O1A SING N N 36  
PKZ C13 C12 SING N N 37  
PKZ O6A CCP SING N N 38  
PKZ C12 C11 SING N N 39  
PKZ CEP CBP SING N N 40  
PKZ CCP CBP SING N N 41  
PKZ CAP CBP SING N N 42  
PKZ CAP OAP SING N N 43  
PKZ CAP C9P SING N N 44  
PKZ CBP CDP SING N N 45  
PKZ O9P C9P DOUB N N 46  
PKZ C11 C10 SING N N 47  
PKZ C9P N8P SING N N 48  
PKZ C10 C9  SING N N 49  
PKZ N8P C7P SING N N 50  
PKZ C9  C8  SING N N 51  
PKZ C7P C6P SING N N 52  
PKZ C6P C5P SING N N 53  
PKZ C8  C7  SING N N 54  
PKZ C6  C7  SING N N 55  
PKZ C6  C5  SING N N 56  
PKZ C4  C5  SING N N 57  
PKZ C4  C3  SING N N 58  
PKZ C5P N4P SING N N 59  
PKZ C5P O5P DOUB N N 60  
PKZ N4P C3P SING N N 61  
PKZ O1  C1  DOUB N N 62  
PKZ C2P C3P SING N N 63  
PKZ C2P S1P SING N N 64  
PKZ C3  C2  SING N N 65  
PKZ C1  S1P SING N N 66  
PKZ C1  C2  SING N N 67  
PKZ C3  H1  SING N N 68  
PKZ C3  H2  SING N N 69  
PKZ C10 H3  SING N N 70  
PKZ C10 H4  SING N N 71  
PKZ C8  H5  SING N N 72  
PKZ C8  H6  SING N N 73  
PKZ C7  H7  SING N N 74  
PKZ C7  H8  SING N N 75  
PKZ C5  H9  SING N N 76  
PKZ C5  H10 SING N N 77  
PKZ C11 H11 SING N N 78  
PKZ C11 H12 SING N N 79  
PKZ C13 H13 SING N N 80  
PKZ C13 H14 SING N N 81  
PKZ C16 H15 SING N N 82  
PKZ C16 H16 SING N N 83  
PKZ C16 H17 SING N N 84  
PKZ C15 H18 SING N N 85  
PKZ C15 H19 SING N N 86  
PKZ C14 H20 SING N N 87  
PKZ C14 H21 SING N N 88  
PKZ C2A H22 SING N N 89  
PKZ N6A H23 SING N N 90  
PKZ N6A H24 SING N N 91  
PKZ C8A H25 SING N N 92  
PKZ C1B H26 SING N N 93  
PKZ C2B H27 SING N N 94  
PKZ O2B H28 SING N N 95  
PKZ C3B H29 SING N N 96  
PKZ O7A H30 SING N N 97  
PKZ O8A H31 SING N N 98  
PKZ C4B H32 SING N N 99  
PKZ C5B H33 SING N N 100 
PKZ C5B H34 SING N N 101 
PKZ O1A H35 SING N N 102 
PKZ O4A H36 SING N N 103 
PKZ CCP H37 SING N N 104 
PKZ CCP H38 SING N N 105 
PKZ CDP H39 SING N N 106 
PKZ CDP H40 SING N N 107 
PKZ CDP H41 SING N N 108 
PKZ CEP H42 SING N N 109 
PKZ CEP H43 SING N N 110 
PKZ CEP H44 SING N N 111 
PKZ CAP H45 SING N N 112 
PKZ OAP H46 SING N N 113 
PKZ N8P H47 SING N N 114 
PKZ C7P H48 SING N N 115 
PKZ C7P H49 SING N N 116 
PKZ C6P H50 SING N N 117 
PKZ C6P H51 SING N N 118 
PKZ N4P H52 SING N N 119 
PKZ C3P H53 SING N N 120 
PKZ C3P H54 SING N N 121 
PKZ C2P H55 SING N N 122 
PKZ C2P H56 SING N N 123 
PKZ C2  H57 SING N N 124 
PKZ C2  H58 SING N N 125 
PKZ C4  H59 SING N N 126 
PKZ C4  H60 SING N N 127 
PKZ C6  H61 SING N N 128 
PKZ C6  H62 SING N N 129 
PKZ C9  H63 SING N N 130 
PKZ C9  H64 SING N N 131 
PKZ C12 H65 SING N N 132 
PKZ C12 H66 SING N N 133 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PKZ SMILES           ACDLabs              12.01 "C(CC(SCCNC(CCNC(C(C(C)(COP(OP(OCC3C(C(C(n2c1ncnc(c1nc2)N)O3)O)OP(O)(O)=O)(=O)O)(O)=O)C)O)=O)=O)=O)CCCCCCCCCCCCC"                                                                                                                                                                                                                                           
PKZ InChI            InChI                1.03  "InChI=1S/C37H66N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-28(46)65-21-20-39-27(45)18-19-40-35(49)32(48)37(2,3)23-58-64(55,56)61-63(53,54)57-22-26-31(60-62(50,51)52)30(47)36(59-26)44-25-43-29-33(38)41-24-42-34(29)44/h24-26,30-32,36,47-48H,4-23H2,1-3H3,(H,39,45)(H,40,49)(H,53,54)(H,55,56)(H2,38,41,42)(H2,50,51,52)/t26-,30-,31-,32+,36-/m1/s1" 
PKZ InChIKey         InChI                1.03  MNBKLUUYKPBKDU-BBECNAHFSA-N                                                                                                                                                                                                                                                                                                                                 
PKZ SMILES_CANONICAL CACTVS               3.385 "CCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23"                                                                                                                                                                                                                    
PKZ SMILES           CACTVS               3.385 "CCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23"                                                                                                                                                                                                                          
PKZ SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O"                                                                                                                                                                                                                        
PKZ SMILES           "OpenEye OEToolkits" 1.9.2 "CCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O"                                                                                                                                                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PKZ "SYSTEMATIC NAME" ACDLabs              12.01 "S-{(3R,5S,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} hexadecanethioate (non-preferred name)" 
PKZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] hexadecanethioate"                                            
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
PKZ "Create component"   2015-09-29 PDBJ 
PKZ "Initial release"    2016-08-31 RCSB 
PKZ "Other modification" 2016-10-12 PDBJ 
PKZ "Modify PCM"         2025-06-24 RCSB 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            PKZ 
_pdbx_chem_comp_pcm.modified_residue_id                ARG 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               O3A 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NH2 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
