data_NXZ
# 
_chem_comp.id                                    NXZ 
_chem_comp.name                                  "1-[(3S,4S)-4-amino-1-(6-phenylpyrimidin-4-yl)pyrrolidin-3-yl]piperidin-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H23 N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-01-17 
_chem_comp.pdbx_modified_date                    2012-01-20 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        337.419 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     NXZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3QBJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
NXZ N1   N1   N 0 1 N N N -1.840 -4.517 71.988 0.600  0.361  0.078  N1   NXZ 1  
NXZ C2   C2   C 0 1 N N S -0.767 -4.955 69.997 2.228  0.486  1.832  C2   NXZ 2  
NXZ C3   C3   C 0 1 N N S -1.364 -3.564 70.012 2.850  1.048  0.536  C3   NXZ 3  
NXZ C4   C4   C 0 1 N N N -2.486 -3.606 71.019 1.655  1.285  -0.412 C4   NXZ 4  
NXZ C5   C5   C 0 1 N N N -0.712 -5.319 71.488 0.710  0.432  1.558  C5   NXZ 5  
NXZ C6   C6   C 0 1 Y N N -1.910 -6.209 76.672 -4.271 -0.238 -0.109 C6   NXZ 6  
NXZ C7   C7   C 0 1 Y N N -2.536 -6.115 77.971 -5.503 0.221  -0.571 C7   NXZ 7  
NXZ C8   C8   C 0 1 Y N N -2.064 -6.927 79.042 -6.656 -0.471 -0.255 C8   NXZ 8  
NXZ C9   C9   C 0 1 Y N N -0.998 -7.829 78.803 -6.589 -1.616 0.517  C9   NXZ 9  
NXZ C10  C10  C 0 1 Y N N -0.371 -7.948 77.514 -5.368 -2.076 0.978  C10  NXZ 10 
NXZ C11  C11  C 0 1 Y N N -0.831 -7.124 76.447 -4.209 -1.393 0.668  C11  NXZ 11 
NXZ C12  C12  C 0 1 Y N N -2.403 -5.344 75.558 -3.028 0.497  -0.450 C12  NXZ 12 
NXZ C13  C13  C 0 1 Y N N -1.812 -5.398 74.268 -1.792 0.043  0.002  C13  NXZ 13 
NXZ C14  C14  C 0 1 Y N N -2.337 -4.562 73.274 -0.655 0.770  -0.347 C14  NXZ 14 
NXZ N15  N15  N 0 1 Y N N -3.411 -3.738 73.617 -0.791 1.863  -1.093 N15  NXZ 15 
NXZ C16  C16  C 0 1 Y N N -3.955 -3.675 74.855 -1.980 2.261  -1.501 C16  NXZ 16 
NXZ N17  N17  N 0 1 Y N N -3.460 -4.480 75.816 -3.077 1.600  -1.198 N17  NXZ 17 
NXZ N18  N18  N 0 1 N N N 0.525  -4.908 69.404 2.511  1.381  2.962  N18  NXZ 18 
NXZ N19  N19  N 0 1 N N N -1.773 -3.056 68.691 3.777  0.074  -0.046 N19  NXZ 19 
NXZ C20  C20  C 0 1 N N N -3.006 -3.662 68.102 5.170  0.469  -0.208 C20  NXZ 20 
NXZ C21  C21  C 0 1 N N N -3.127 -3.457 66.587 6.061  -0.763 -0.370 C21  NXZ 21 
NXZ C22  C22  C 0 1 N N N -2.580 -2.075 66.105 5.467  -1.658 -1.464 C22  NXZ 22 
NXZ C23  C23  C 0 1 N N N -1.172 -1.753 66.650 4.138  -2.225 -0.958 C23  NXZ 23 
NXZ C24  C24  C 0 1 N N N -0.948 -2.125 68.117 3.293  -1.120 -0.391 C24  NXZ 24 
NXZ O25  O25  O 0 1 N N N 0.014  -1.638 68.703 2.106  -1.322 -0.246 O25  NXZ 25 
NXZ H2   H2   H 0 1 N N N -1.336 -5.694 69.414 2.613  -0.513 2.034  H2   NXZ 26 
NXZ H3   H3   H 0 1 N N N -0.599 -2.830 70.304 3.365  1.987  0.739  H3   NXZ 27 
NXZ H4   H4   H 0 1 N N N -3.432 -3.993 70.611 1.929  1.039  -1.438 H4   NXZ 28 
NXZ H4A  H4A  H 0 1 N N N -2.740 -2.622 71.439 1.316  2.319  -0.345 H4A  NXZ 29 
NXZ H5   H5   H 0 1 N N N 0.245  -5.047 71.958 0.223  1.332  1.932  H5   NXZ 30 
NXZ H5A  H5A  H 0 1 N N N -0.843 -6.396 71.668 0.273  -0.456 2.014  H5A  NXZ 31 
NXZ H7   H7   H 0 1 N N N -3.358 -5.432 78.129 -5.557 1.115  -1.173 H7   NXZ 32 
NXZ H8   H8   H 0 1 N N N -2.512 -6.856 80.022 -7.611 -0.116 -0.612 H8   NXZ 33 
NXZ H9   H9   H 0 1 N N N -0.645 -8.447 79.615 -7.493 -2.154 0.761  H9   NXZ 34 
NXZ H10  H10  H 0 1 N N N 0.435  -8.650 77.358 -5.322 -2.971 1.581  H10  NXZ 35 
NXZ H11  H11  H 0 1 N N N -0.369 -7.189 75.473 -3.257 -1.753 1.028  H11  NXZ 36 
NXZ H13  H13  H 0 1 N N N -0.985 -6.061 74.060 -1.716 -0.849 0.607  H13  NXZ 37 
NXZ H16  H16  H 0 1 N N N -4.767 -2.995 75.068 -2.055 3.153  -2.105 H16  NXZ 38 
NXZ HN18 HN18 H 0 0 N N N 0.921  -5.826 69.393 2.108  1.024  3.816  HN18 NXZ 39 
NXZ HN1A HN1A H 0 0 N N N 0.449  -4.567 68.467 3.503  1.531  3.066  HN1A NXZ 40 
NXZ H20  H20  H 0 1 N N N -2.984 -4.744 68.300 5.266  1.101  -1.091 H20  NXZ 41 
NXZ H20A H20A H 0 0 N N N -3.879 -3.195 68.581 5.490  1.028  0.671  H20A NXZ 42 
NXZ H21  H21  H 0 1 N N N -2.551 -4.249 66.086 7.066  -0.454 -0.656 H21  NXZ 43 
NXZ H21A H21A H 0 0 N N N -4.191 -3.519 66.315 6.101  -1.311 0.572  H21A NXZ 44 
NXZ H22  H22  H 0 1 N N N -2.529 -2.089 65.006 5.295  -1.070 -2.366 H22  NXZ 45 
NXZ H22A H22A H 0 0 N N N -3.270 -1.292 66.451 6.154  -2.475 -1.684 H22A NXZ 46 
NXZ H23  H23  H 0 1 N N N -0.444 -2.315 66.047 3.609  -2.701 -1.784 H23  NXZ 47 
NXZ H23A H23A H 0 0 N N N -1.016 -0.669 66.552 4.332  -2.963 -0.181 H23A NXZ 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
NXZ C4  N1   SING N N 1  
NXZ C5  N1   SING N N 2  
NXZ N1  C14  SING N N 3  
NXZ N18 C2   SING N N 4  
NXZ C2  C3   SING N N 5  
NXZ C2  C5   SING N N 6  
NXZ C2  H2   SING N N 7  
NXZ N19 C3   SING N N 8  
NXZ C3  C4   SING N N 9  
NXZ C3  H3   SING N N 10 
NXZ C4  H4   SING N N 11 
NXZ C4  H4A  SING N N 12 
NXZ C5  H5   SING N N 13 
NXZ C5  H5A  SING N N 14 
NXZ C12 C6   SING Y N 15 
NXZ C11 C6   DOUB Y N 16 
NXZ C6  C7   SING Y N 17 
NXZ C7  C8   DOUB Y N 18 
NXZ C7  H7   SING N N 19 
NXZ C9  C8   SING Y N 20 
NXZ C8  H8   SING N N 21 
NXZ C10 C9   DOUB Y N 22 
NXZ C9  H9   SING N N 23 
NXZ C11 C10  SING Y N 24 
NXZ C10 H10  SING N N 25 
NXZ C11 H11  SING N N 26 
NXZ C13 C12  DOUB Y N 27 
NXZ C12 N17  SING Y N 28 
NXZ C14 C13  SING Y N 29 
NXZ C13 H13  SING N N 30 
NXZ C14 N15  DOUB Y N 31 
NXZ N15 C16  SING Y N 32 
NXZ C16 N17  DOUB Y N 33 
NXZ C16 H16  SING N N 34 
NXZ N18 HN18 SING N N 35 
NXZ N18 HN1A SING N N 36 
NXZ C20 N19  SING N N 37 
NXZ C24 N19  SING N N 38 
NXZ C21 C20  SING N N 39 
NXZ C20 H20  SING N N 40 
NXZ C20 H20A SING N N 41 
NXZ C22 C21  SING N N 42 
NXZ C21 H21  SING N N 43 
NXZ C21 H21A SING N N 44 
NXZ C22 C23  SING N N 45 
NXZ C22 H22  SING N N 46 
NXZ C22 H22A SING N N 47 
NXZ C23 C24  SING N N 48 
NXZ C23 H23  SING N N 49 
NXZ C23 H23A SING N N 50 
NXZ C24 O25  DOUB N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
NXZ SMILES           ACDLabs              12.01 "O=C4N(C3CN(c2ncnc(c1ccccc1)c2)CC3N)CCCC4"                                                                                                                  
NXZ SMILES_CANONICAL CACTVS               3.370 "N[C@H]1CN(C[C@@H]1N2CCCCC2=O)c3cc(ncn3)c4ccccc4"                                                                                                           
NXZ SMILES           CACTVS               3.370 "N[CH]1CN(C[CH]1N2CCCCC2=O)c3cc(ncn3)c4ccccc4"                                                                                                              
NXZ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)c2cc(ncn2)N3C[C@@H]([C@H](C3)N4CCCCC4=O)N"                                                                                                       
NXZ SMILES           "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)c2cc(ncn2)N3CC(C(C3)N4CCCCC4=O)N"                                                                                                                
NXZ InChI            InChI                1.03  "InChI=1S/C19H23N5O/c20-15-11-23(12-17(15)24-9-5-4-8-19(24)25)18-10-16(21-13-22-18)14-6-2-1-3-7-14/h1-3,6-7,10,13,15,17H,4-5,8-9,11-12,20H2/t15-,17-/m0/s1" 
NXZ InChIKey         InChI                1.03  FHAABBQZMYZFKY-RDJZCZTQSA-N                                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
NXZ "SYSTEMATIC NAME" ACDLabs              12.01 "1-[(3S,4S)-4-amino-1-(6-phenylpyrimidin-4-yl)pyrrolidin-3-yl]piperidin-2-one"  
NXZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "1-[(3S,4S)-4-azanyl-1-(6-phenylpyrimidin-4-yl)pyrrolidin-3-yl]piperidin-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
NXZ "Create component"     2011-01-17 RCSB 
NXZ "Modify aromatic_flag" 2011-06-04 RCSB 
NXZ "Modify descriptor"    2011-06-04 RCSB 
# 
