data_KDZ
#

_chem_comp.id                                   KDZ
_chem_comp.name                                 "(3~{R})-2,2-bis(oxidanyl)-3-(phenylmethylsulfanyl)-3,4-dihydro-1,2-benzoxaborinin-2-ium-8-carboxylic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H16 B O5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   -1
_chem_comp.pdbx_initial_date                    2019-05-14
_chem_comp.pdbx_modified_date                   2020-04-09
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       331.171
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    KDZ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6RPN
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KDZ  B02  B1   B  -1  1  N  N  N  -35.252  -11.013  68.077  -0.628   0.822   0.476  B02  KDZ   1  
KDZ  C04  C1   C   0  1  N  N  R  -33.934  -11.553  67.360   0.152  -0.439  -0.130  C04  KDZ   2  
KDZ  C06  C2   C   0  1  N  N  N  -35.035  -12.905  64.929   2.829   0.041  -0.945  C06  KDZ   3  
KDZ  C07  C3   C   0  1  Y  N  N  -34.877  -13.153  63.427   4.291   0.065  -0.580  C07  KDZ   4  
KDZ  C08  C4   C   0  1  Y  N  N  -36.009  -13.212  62.626   5.064  -1.068  -0.747  C08  KDZ   5  
KDZ  C09  C5   C   0  1  Y  N  N  -35.877  -13.437  61.264   6.405  -1.046  -0.412  C09  KDZ   6  
KDZ  C10  C6   C   0  1  Y  N  N  -34.620  -13.611  60.709   6.972   0.110   0.091  C10  KDZ   7  
KDZ  C11  C7   C   0  1  Y  N  N  -33.488  -13.559  61.507   6.199   1.243   0.259  C11  KDZ   8  
KDZ  C12  C8   C   0  1  Y  N  N  -33.615  -13.333  62.871   4.860   1.223  -0.083  C12  KDZ   9  
KDZ  C13  C9   C   0  1  N  N  N  -32.739  -10.712  67.769  -0.590  -1.703   0.318  C13  KDZ  10  
KDZ  C14  C10  C   0  1  Y  N  N  -33.179   -9.225  67.686  -2.074  -1.496   0.132  C14  KDZ  11  
KDZ  C15  C11  C   0  1  Y  N  N  -34.408   -8.891  68.231  -2.612  -0.237  -0.058  C15  KDZ  12  
KDZ  C16  C12  C   0  1  Y  N  N  -34.904   -7.599  68.178  -4.004  -0.102  -0.220  C16  KDZ  13  
KDZ  C17  C13  C   0  1  N  N  N  -36.265   -7.300  68.771  -4.596   1.234  -0.418  C17  KDZ  14  
KDZ  C20  C14  C   0  1  Y  N  N  -34.147   -6.615  67.551  -4.824  -1.230  -0.193  C20  KDZ  15  
KDZ  C21  C15  C   0  1  Y  N  N  -32.896   -6.948  67.001  -4.267  -2.477  -0.007  C21  KDZ  16  
KDZ  C22  C16  C   0  1  Y  N  N  -32.418   -8.251  67.058  -2.899  -2.608   0.154  C22  KDZ  17  
KDZ  O01  O1   O   0  1  N  N  N  -35.967  -12.150  69.003   0.068   1.967   0.204  O01  KDZ  18  
KDZ  O03  O2   O   0  1  N  N  N  -36.469  -10.738  67.017  -0.761   0.677   1.829  O03  KDZ  19  
KDZ  O18  O3   O   0  1  N  N  N  -36.716   -8.020  69.710  -5.929   1.364  -0.573  O18  KDZ  20  
KDZ  O19  O4   O   0  1  N  N  N  -36.948   -6.369  68.250  -3.883   2.217  -0.441  O19  KDZ  21  
KDZ  O23  O5   O   0  1  N  N  N  -35.156   -9.929  68.862  -1.860   0.887  -0.100  O23  KDZ  22  
KDZ  S05  S1   S   0  1  N  N  N  -33.973  -11.531  65.483   1.854  -0.469   0.497  S05  KDZ  23  
KDZ  H1   H1   H   0  1  N  N  N  -33.773  -12.602  67.649   0.159  -0.381  -1.219  H1   KDZ  24  
KDZ  H2   H2   H   0  1  N  N  N  -36.085  -12.657  65.144   2.517   1.036  -1.262  H2   KDZ  25  
KDZ  H3   H3   H   0  1  N  N  N  -34.755  -13.818  65.475   2.670  -0.666  -1.760  H3   KDZ  26  
KDZ  H4   H4   H   0  1  N  N  N  -36.989  -13.083  63.062   4.621  -1.971  -1.140  H4   KDZ  27  
KDZ  H5   H5   H   0  1  N  N  N  -36.755  -13.477  60.636   7.009  -1.932  -0.542  H5   KDZ  28  
KDZ  H6   H6   H   0  1  N  N  N  -34.521  -13.788  59.648   8.020   0.127   0.354  H6   KDZ  29  
KDZ  H7   H7   H   0  1  N  N  N  -32.510  -13.694  61.069   6.642   2.146   0.652  H7   KDZ  30  
KDZ  H8   H8   H   0  1  N  N  N  -32.737  -13.297  63.498   4.255   2.108   0.048  H8   KDZ  31  
KDZ  H9   H9   H   0  1  N  N  N  -32.437  -10.960  68.797  -0.262  -2.551  -0.283  H9   KDZ  32  
KDZ  H10  H10  H   0  1  N  N  N  -31.897  -10.895  67.086  -0.377  -1.897   1.369  H10  KDZ  33  
KDZ  H11  H11  H   0  1  N  N  N  -34.517   -5.602  67.487  -5.892  -1.127  -0.318  H11  KDZ  34  
KDZ  H12  H12  H   0  1  N  N  N  -32.300   -6.181  66.529  -4.899  -3.352   0.012  H12  KDZ  35  
KDZ  H13  H13  H   0  1  N  N  N  -31.464   -8.503  66.618  -2.471  -3.588   0.299  H13  KDZ  36  
KDZ  H14  H14  H   0  1  N  N  N  -35.369  -12.423  69.689  -0.357   2.772   0.531  H14  KDZ  37  
KDZ  H15  H15  H   0  1  N  N  N  -37.231  -10.419  67.485  -1.237   1.401   2.258  H15  KDZ  38  
KDZ  H16  H16  H   0  1  N  N  N  -37.598   -7.743  69.926  -6.270   2.260  -0.700  H16  KDZ  39  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KDZ  C10  C09  DOUB  Y  N   1  
KDZ  C10  C11  SING  Y  N   2  
KDZ  C09  C08  SING  Y  N   3  
KDZ  C11  C12  DOUB  Y  N   4  
KDZ  C08  C07  DOUB  Y  N   5  
KDZ  C12  C07  SING  Y  N   6  
KDZ  C07  C06  SING  N  N   7  
KDZ  C06  S05  SING  N  N   8  
KDZ  S05  C04  SING  N  N   9  
KDZ  C21  C22  DOUB  Y  N  10  
KDZ  C21  C20  SING  Y  N  11  
KDZ  O03  B02  SING  N  N  12  
KDZ  C22  C14  SING  Y  N  13  
KDZ  C04  C13  SING  N  N  14  
KDZ  C04  B02  SING  N  N  15  
KDZ  C20  C16  DOUB  Y  N  16  
KDZ  C14  C13  SING  N  N  17  
KDZ  C14  C15  DOUB  Y  N  18  
KDZ  B02  O23  SING  N  N  19  
KDZ  B02  O01  SING  N  N  20  
KDZ  C16  C15  SING  Y  N  21  
KDZ  C16  C17  SING  N  N  22  
KDZ  C15  O23  SING  N  N  23  
KDZ  O19  C17  DOUB  N  N  24  
KDZ  C17  O18  SING  N  N  25  
KDZ  C04  H1   SING  N  N  26  
KDZ  C06  H2   SING  N  N  27  
KDZ  C06  H3   SING  N  N  28  
KDZ  C08  H4   SING  N  N  29  
KDZ  C09  H5   SING  N  N  30  
KDZ  C10  H6   SING  N  N  31  
KDZ  C11  H7   SING  N  N  32  
KDZ  C12  H8   SING  N  N  33  
KDZ  C13  H9   SING  N  N  34  
KDZ  C13  H10  SING  N  N  35  
KDZ  C20  H11  SING  N  N  36  
KDZ  C21  H12  SING  N  N  37  
KDZ  C22  H13  SING  N  N  38  
KDZ  O01  H14  SING  N  N  39  
KDZ  O03  H15  SING  N  N  40  
KDZ  O18  H16  SING  N  N  41  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KDZ  InChI             InChI                 1.03   "InChI=1S/C16H16BO5S/c18-16(19)13-8-4-7-12-9-14(17(20,21)22-15(12)13)23-10-11-5-2-1-3-6-11/h1-8,14,20-21H,9-10H2,(H,18,19)/q-1/t14-/m0/s1"  
KDZ  InChIKey          InChI                 1.03   NCOFNSDHLWCKKT-AWEZNQCLSA-N  
KDZ  SMILES_CANONICAL  CACTVS                3.385  "OC(=O)c1cccc2C[C@H](SCc3ccccc3)[B-](O)(O)Oc12"  
KDZ  SMILES            CACTVS                3.385  "OC(=O)c1cccc2C[CH](SCc3ccccc3)[B-](O)(O)Oc12"  
KDZ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "[B-]1([C@H](Cc2cccc(c2O1)C(=O)O)SCc3ccccc3)(O)O"  
KDZ  SMILES            "OpenEye OEToolkits"  2.0.7  "[B-]1(C(Cc2cccc(c2O1)C(=O)O)SCc3ccccc3)(O)O"  
#
_pdbx_chem_comp_identifier.comp_id          KDZ
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(4~{R})-3,3-bis(oxidanyl)-4-(phenylmethylsulfanyl)-2-oxa-3-boranuidabicyclo[4.4.0]deca-1(6),7,9-triene-10-carboxylic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KDZ  "Create component"      2019-05-14  EBI   
KDZ  "Initial release"       2020-03-25  RCSB  
KDZ  "Modify formal charge"  2020-04-09  PDBE  
##
