data_CKZ
# 
_chem_comp.id                                    CKZ 
_chem_comp.name                                  "(2~{S},3~{R},4~{R},5~{S},6~{R})-2-[5-(9~{H}-fluoren-2-yl)-4~{H}-1,2,4-triazol-3-yl]-6-(hydroxymethyl)oxane-3,4,5-triol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H21 N3 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-11-28 
_chem_comp.pdbx_modified_date                    2018-02-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        395.409 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     CKZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6F3R 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
CKZ "O5'" O1  O 0 1 N N N 33.622 21.565 28.171 -3.882 -1.006 -0.226 "O5'" CKZ 1  
CKZ "C5'" C1  C 0 1 N N R 32.459 21.017 27.503 -5.222 -1.182 0.237  "C5'" CKZ 2  
CKZ "C4'" C2  C 0 1 N N S 32.591 21.210 25.951 -6.047 0.061  -0.106 "C4'" CKZ 3  
CKZ "C3'" C3  C 0 1 N N R 32.846 22.659 25.600 -5.389 1.292  0.525  "C3'" CKZ 4  
CKZ "C2'" C4  C 0 1 N N R 33.990 23.231 26.455 -3.944 1.397  0.027  "C2'" CKZ 5  
CKZ "C1'" C5  C 0 1 N N S 33.741 22.969 27.944 -3.201 0.102  0.366  "C1'" CKZ 6  
CKZ C1    C6  C 0 1 Y N N 34.876 23.467 28.785 -1.795 0.174  -0.173 C1    CKZ 7  
CKZ "O2'" O2  O 0 1 N N N 34.161 24.643 26.232 -3.298 2.500  0.666  "O2'" CKZ 8  
CKZ "O3'" O3  O 0 1 N N N 33.150 22.756 24.202 -6.111 2.466  0.149  "O3'" CKZ 9  
CKZ "O4'" O4  O 0 1 N N N 31.391 20.744 25.301 -7.373 -0.089 0.406  "O4'" CKZ 10 
CKZ "C6'" C7  C 0 1 N N N 32.363 19.574 27.922 -5.839 -2.407 -0.440 "C6'" CKZ 11 
CKZ "O6'" O5  O 0 1 N N N 33.331 18.731 27.271 -5.139 -3.582 -0.027 "O6'" CKZ 12 
CKZ N5    N1  N 0 1 Y N N 34.748 24.082 29.984 -0.649 -0.000 0.540  N5    CKZ 13 
CKZ C4    C8  C 0 1 Y N N 35.999 24.364 30.445 0.374  0.153  -0.356 C4    CKZ 14 
CKZ N3    N2  N 0 1 Y N N 36.880 23.958 29.555 -0.173 0.403  -1.525 N3    CKZ 15 
CKZ N2    N3  N 0 1 Y N N 36.173 23.391 28.497 -1.453 0.410  -1.411 N2    CKZ 16 
CKZ C6    C9  C 0 1 Y N N 36.263 25.026 31.730 1.821  0.056  -0.064 C6    CKZ 17 
CKZ C11   C10 C 0 1 Y N N 35.224 25.084 32.658 2.256  -0.223 1.233  C11   CKZ 18 
CKZ C10   C11 C 0 1 Y N N 35.372 25.698 33.898 3.602  -0.313 1.505  C10   CKZ 19 
CKZ C9    C12 C 0 1 Y N N 36.593 26.222 34.223 4.539  -0.126 0.484  C9    CKZ 20 
CKZ C8    C13 C 0 1 Y N N 37.671 26.146 33.322 4.100  0.152  -0.810 C8    CKZ 21 
CKZ C7    C14 C 0 1 Y N N 37.520 25.544 32.075 2.755  0.237  -1.086 C7    CKZ 22 
CKZ C14   C15 C 0 1 Y N N 37.026 26.887 35.450 6.021  -0.167 0.503  C14   CKZ 23 
CKZ C13   C16 C 0 1 Y N N 38.364 27.244 35.295 6.510  0.084  -0.777 C13   CKZ 24 
CKZ C12   C17 C 0 1 N N N 38.870 26.820 33.928 5.322  0.301  -1.682 C12   CKZ 25 
CKZ C18   C18 C 0 1 Y N N 36.348 27.134 36.643 6.920  -0.404 1.545  C18   CKZ 26 
CKZ C17   C19 C 0 1 Y N N 37.033 27.760 37.672 8.278  -0.387 1.300  C17   CKZ 27 
CKZ C16   C20 C 0 1 Y N N 38.354 28.143 37.518 8.753  -0.136 0.026  C16   CKZ 28 
CKZ C15   C21 C 0 1 Y N N 39.040 27.890 36.339 7.868  0.098  -1.012 C15   CKZ 29 
CKZ H1    H1  H 0 1 N N N 31.555 21.547 27.838 -5.217 -1.327 1.318  H1    CKZ 30 
CKZ H2    H2  H 0 1 N N N 33.449 20.612 25.609 -6.086 0.184  -1.189 H2    CKZ 31 
CKZ H3    H3  H 0 1 N N N 31.935 23.235 25.818 -5.394 1.191  1.611  H3    CKZ 32 
CKZ H4    H4  H 0 1 N N N 34.915 22.708 26.171 -3.941 1.547  -1.052 H4    CKZ 33 
CKZ H5    H5  H 0 1 N N N 32.816 23.482 28.244 -3.169 -0.026 1.448  H5    CKZ 34 
CKZ H6    H6  H 0 1 N N N 34.873 24.966 26.773 -3.720 3.354  0.498  H6    CKZ 35 
CKZ H7    H7  H 0 1 N N N 33.311 23.664 23.975 -5.748 3.285  0.514  H7    CKZ 36 
CKZ H8    H8  H 0 1 N N N 31.240 19.834 25.528 -7.952 0.664  0.224  H8    CKZ 37 
CKZ H9    H9  H 0 1 N N N 31.356 19.205 27.677 -6.888 -2.490 -0.155 H9    CKZ 38 
CKZ H10   H10 H 0 1 N N N 32.521 19.514 29.009 -5.764 -2.300 -1.522 H10   CKZ 39 
CKZ H11   H11 H 0 1 N N N 33.225 17.836 27.571 -5.478 -4.399 -0.418 H11   CKZ 40 
CKZ H12   H12 H 0 1 N N N 33.888 24.292 30.449 -0.574 -0.193 1.488  H12   CKZ 41 
CKZ H13   H13 H 0 1 N N N 34.273 24.638 32.406 1.536  -0.368 2.024  H13   CKZ 42 
CKZ H14   H14 H 0 1 N N N 34.543 25.759 34.587 3.936  -0.529 2.509  H14   CKZ 43 
CKZ H15   H15 H 0 1 N N N 38.352 25.478 31.389 2.422  0.448  -2.092 H15   CKZ 44 
CKZ H16   H16 H 0 1 N N N 39.714 26.121 34.018 5.313  -0.448 -2.474 H16   CKZ 45 
CKZ H17   H17 H 0 1 N N N 39.178 27.692 33.332 5.356  1.302  -2.113 H17   CKZ 46 
CKZ H18   H18 H 0 1 N N N 35.314 26.845 36.762 6.553  -0.600 2.542  H18   CKZ 47 
CKZ H19   H19 H 0 1 N N N 36.529 27.952 38.608 8.972  -0.571 2.107  H19   CKZ 48 
CKZ H20   H20 H 0 1 N N N 38.859 28.647 38.329 9.817  -0.124 -0.160 H20   CKZ 49 
CKZ H21   H21 H 0 1 N N N 40.073 28.185 36.228 8.241  0.294  -2.006 H21   CKZ 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CKZ "O3'" "C3'" SING N N 1  
CKZ "O4'" "C4'" SING N N 2  
CKZ "C3'" "C4'" SING N N 3  
CKZ "C3'" "C2'" SING N N 4  
CKZ "C4'" "C5'" SING N N 5  
CKZ "O2'" "C2'" SING N N 6  
CKZ "C2'" "C1'" SING N N 7  
CKZ "O6'" "C6'" SING N N 8  
CKZ "C5'" "C6'" SING N N 9  
CKZ "C5'" "O5'" SING N N 10 
CKZ "C1'" "O5'" SING N N 11 
CKZ "C1'" C1    SING N N 12 
CKZ N2    C1    DOUB Y N 13 
CKZ N2    N3    SING Y N 14 
CKZ C1    N5    SING Y N 15 
CKZ N3    C4    DOUB Y N 16 
CKZ N5    C4    SING Y N 17 
CKZ C4    C6    SING N N 18 
CKZ C6    C7    SING Y N 19 
CKZ C6    C11   DOUB Y N 20 
CKZ C7    C8    DOUB Y N 21 
CKZ C11   C10   SING Y N 22 
CKZ C8    C12   SING N N 23 
CKZ C8    C9    SING Y N 24 
CKZ C10   C9    DOUB Y N 25 
CKZ C12   C13   SING N N 26 
CKZ C9    C14   SING N N 27 
CKZ C13   C14   SING Y N 28 
CKZ C13   C15   DOUB Y N 29 
CKZ C14   C18   DOUB Y N 30 
CKZ C15   C16   SING Y N 31 
CKZ C18   C17   SING Y N 32 
CKZ C16   C17   DOUB Y N 33 
CKZ "C5'" H1    SING N N 34 
CKZ "C4'" H2    SING N N 35 
CKZ "C3'" H3    SING N N 36 
CKZ "C2'" H4    SING N N 37 
CKZ "C1'" H5    SING N N 38 
CKZ "O2'" H6    SING N N 39 
CKZ "O3'" H7    SING N N 40 
CKZ "O4'" H8    SING N N 41 
CKZ "C6'" H9    SING N N 42 
CKZ "C6'" H10   SING N N 43 
CKZ "O6'" H11   SING N N 44 
CKZ N5    H12   SING N N 45 
CKZ C11   H13   SING N N 46 
CKZ C10   H14   SING N N 47 
CKZ C7    H15   SING N N 48 
CKZ C12   H16   SING N N 49 
CKZ C12   H17   SING N N 50 
CKZ C18   H18   SING N N 51 
CKZ C17   H19   SING N N 52 
CKZ C16   H20   SING N N 53 
CKZ C15   H21   SING N N 54 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
CKZ InChI            InChI                1.03  "InChI=1S/C21H21N3O5/c25-9-15-16(26)17(27)18(28)19(29-15)21-22-20(23-24-21)11-5-6-14-12(8-11)7-10-3-1-2-4-13(10)14/h1-6,8,15-19,25-28H,7,9H2,(H,22,23,24)/t15-,16-,17+,18-,19-/m1/s1" 
CKZ InChIKey         InChI                1.03  TZDHXEVIRUMISB-UJWQCDCRSA-N                                                                                                                                                           
CKZ SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@H]([C@H](O)[C@@H](O)[C@@H]1O)c2[nH]c(nn2)c3ccc4c(Cc5ccccc45)c3"                                                                                                          
CKZ SMILES           CACTVS               3.385 "OC[CH]1O[CH]([CH](O)[CH](O)[CH]1O)c2[nH]c(nn2)c3ccc4c(Cc5ccccc45)c3"                                                                                                                 
CKZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc-2c(c1)Cc3c2ccc(c3)c4[nH]c(nn4)[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O"                                                                                                     
CKZ SMILES           "OpenEye OEToolkits" 2.0.6 "c1ccc-2c(c1)Cc3c2ccc(c3)c4[nH]c(nn4)C5C(C(C(C(O5)CO)O)O)O"                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
CKZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S},3~{R},4~{R},5~{S},6~{R})-2-[5-(9~{H}-fluoren-2-yl)-4~{H}-1,2,4-triazol-3-yl]-6-(hydroxymethyl)oxane-3,4,5-triol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
CKZ "Create component" 2017-11-28 EBI  
CKZ "Initial release"  2018-02-28 RCSB 
# 
