data_A1ACZ
# 
_chem_comp.id                                    A1ACZ 
_chem_comp.name                                  8-chloroadenosine 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H12 Cl N5 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-01-17 
_chem_comp.pdbx_modified_date                    2024-12-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        301.686 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1ACZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GYR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1ACZ CL  CL1 CL 0 0 N N N N N N 20.422 9.039  5.656  -0.556 2.325  0.942  CL  A1ACZ 1  
A1ACZ C4  C1  C  0 1 Y N N N N N 21.265 9.141  7.141  0.712  1.250  0.440  C4  A1ACZ 2  
A1ACZ N2  N1  N  0 1 Y N N N N N 22.470 9.618  7.252  1.987  1.508  0.521  N2  A1ACZ 3  
A1ACZ C3  C2  C  0 1 Y N N N N N 22.749 9.472  8.601  2.692  0.454  0.043  C3  A1ACZ 4  
A1ACZ C   C3  C  0 1 Y N N N N N 23.863 9.846  9.382  4.059  0.169  -0.115 C   A1ACZ 5  
A1ACZ N4  N2  N  0 1 N N N N N N 24.908 10.542 8.915  5.022  1.089  0.263  N4  A1ACZ 6  
A1ACZ N3  N3  N  0 1 Y N N N N N 20.710 8.684  8.304  0.522  0.009  -0.091 N3  A1ACZ 7  
A1ACZ C2  C4  C  0 1 Y N N N N N 21.689 8.881  9.264  1.761  -0.519 -0.358 C2  A1ACZ 8  
A1ACZ N1  N4  N  0 1 Y N N N N N 21.623 8.600  10.573 2.203  -1.664 -0.869 N1  A1ACZ 9  
A1ACZ C1  C5  C  0 1 Y N N N N N 22.746 8.955  11.202 3.494  -1.887 -0.998 C1  A1ACZ 10 
A1ACZ N   N5  N  0 1 Y N N N N N 23.832 9.552  10.700 4.406  -1.003 -0.636 N   A1ACZ 11 
A1ACZ C5  C6  C  0 1 N N R N N N 19.380 8.160  8.569  -0.768 -0.642 -0.335 C5  A1ACZ 12 
A1ACZ O   O1  O  0 1 N N N N N N 19.198 6.995  7.790  -1.710 0.303  -0.888 O   A1ACZ 13 
A1ACZ C8  C7  C  0 1 N N R N N N 17.809 6.861  7.413  -3.013 -0.262 -0.626 C8  A1ACZ 14 
A1ACZ C9  C8  C  0 1 N N N N N N 17.708 6.670  5.916  -4.087 0.826  -0.685 C9  A1ACZ 15 
A1ACZ O1  O2  O  0 1 N N N N N N 18.373 5.472  5.501  -4.194 1.317  -2.023 O1  A1ACZ 16 
A1ACZ C7  C9  C  0 1 N N S N N N 17.089 8.075  8.011  -2.912 -0.841 0.803  C7  A1ACZ 17 
A1ACZ O2  O3  O  0 1 N N N N N N 16.539 7.699  9.273  -3.644 -2.065 0.900  O2  A1ACZ 18 
A1ACZ C6  C10 C  0 1 N N R N N N 18.225 9.087  8.200  -1.400 -1.099 0.998  C6  A1ACZ 19 
A1ACZ O3  O4  O  0 1 N N N N N N 17.997 10.019 9.250  -1.154 -2.489 1.222  O3  A1ACZ 20 
A1ACZ H1  H1  H  0 1 N N N N N N 25.537 10.744 9.666  4.756  1.941  0.643  H1  A1ACZ 21 
A1ACZ H2  H2  H  0 1 N N N N N N 25.383 10.003 8.219  5.962  0.881  0.149  H2  A1ACZ 22 
A1ACZ H3  H3  H  0 1 N N N N N N 22.782 8.730  12.258 3.819  -2.828 -1.417 H3  A1ACZ 23 
A1ACZ H4  H4  H  0 1 N N N N N N 19.295 7.911  9.637  -0.643 -1.491 -1.007 H4  A1ACZ 24 
A1ACZ H5  H5  H  0 1 N N N N N N 17.399 5.961  7.895  -3.234 -1.054 -1.342 H5  A1ACZ 25 
A1ACZ H6  H6  H  0 1 N N N N N N 18.172 7.531  5.412  -5.045 0.408  -0.374 H6  A1ACZ 26 
A1ACZ H7  H7  H  0 1 N N N N N N 16.647 6.608  5.633  -3.814 1.643  -0.018 H7  A1ACZ 27 
A1ACZ H8  H8  H  0 1 N N N N N N 18.295 5.376  4.559  -4.858 2.011  -2.135 H8  A1ACZ 28 
A1ACZ H9  H9  H  0 1 N N N N N N 16.328 8.462  7.317  -3.276 -0.119 1.534  H9  A1ACZ 29 
A1ACZ H10 H10 H  0 1 N N N N N N 16.089 8.442  9.657  -4.590 -1.973 0.726  H10 A1ACZ 30 
A1ACZ H11 H11 H  0 1 N N N N N N 18.438 9.594  7.248  -1.015 -0.504 1.826  H11 A1ACZ 31 
A1ACZ H12 H12 H  0 1 N N N N N N 18.735 10.614 9.312  -1.580 -2.841 2.016  H12 A1ACZ 32 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1ACZ O1 C9  SING N N 1  
A1ACZ CL C4  SING N N 2  
A1ACZ C9 C8  SING N N 3  
A1ACZ C4 N2  DOUB Y N 4  
A1ACZ C4 N3  SING Y N 5  
A1ACZ N2 C3  SING Y N 6  
A1ACZ C8 O   SING N N 7  
A1ACZ C8 C7  SING N N 8  
A1ACZ O  C5  SING N N 9  
A1ACZ C7 C6  SING N N 10 
A1ACZ C7 O2  SING N N 11 
A1ACZ C6 C5  SING N N 12 
A1ACZ C6 O3  SING N N 13 
A1ACZ N3 C5  SING N N 14 
A1ACZ N3 C2  SING Y N 15 
A1ACZ C3 C2  DOUB Y N 16 
A1ACZ C3 C   SING Y N 17 
A1ACZ N4 C   SING N N 18 
A1ACZ C2 N1  SING Y N 19 
A1ACZ C  N   DOUB Y N 20 
A1ACZ N1 C1  DOUB Y N 21 
A1ACZ N  C1  SING Y N 22 
A1ACZ N4 H1  SING N N 23 
A1ACZ N4 H2  SING N N 24 
A1ACZ C1 H3  SING N N 25 
A1ACZ C5 H4  SING N N 26 
A1ACZ C8 H5  SING N N 27 
A1ACZ C9 H6  SING N N 28 
A1ACZ C9 H7  SING N N 29 
A1ACZ O1 H8  SING N N 30 
A1ACZ C7 H9  SING N N 31 
A1ACZ O2 H10 SING N N 32 
A1ACZ C6 H11 SING N N 33 
A1ACZ O3 H12 SING N N 34 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1ACZ SMILES           ACDLabs              12.01 "Nc1ncnc2c1nc(Cl)n2C1OC(CO)C(O)C1O"                                                                                                       
A1ACZ InChI            InChI                1.06  "InChI=1S/C10H12ClN5O4/c11-10-15-4-7(12)13-2-14-8(4)16(10)9-6(19)5(18)3(1-17)20-9/h2-3,5-6,9,17-19H,1H2,(H2,12,13,14)/t3-,5-,6-,9-/m1/s1" 
A1ACZ InChIKey         InChI                1.06  MHDPPLULTMGBSI-UUOKFMHZSA-N                                                                                                               
A1ACZ SMILES_CANONICAL CACTVS               3.385 "Nc1ncnc2n([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)c(Cl)nc12"                                                                                   
A1ACZ SMILES           CACTVS               3.385 "Nc1ncnc2n([CH]3O[CH](CO)[CH](O)[CH]3O)c(Cl)nc12"                                                                                         
A1ACZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(c(n2)Cl)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)N"                                                                             
A1ACZ SMILES           "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(c(n2)Cl)C3C(C(C(O3)CO)O)O)N"                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1ACZ "SYSTEMATIC NAME" ACDLabs              12.01 8-chloroadenosine                                                                                 
A1ACZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{R},4~{S},5~{R})-2-(6-azanyl-8-chloranyl-purin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1ACZ "Create component" 2024-01-17 RCSB 
A1ACZ "Initial release"  2024-12-11 RCSB 
# 
