data_8YZ
# 
_chem_comp.id                                    8YZ 
_chem_comp.name                                  "(2~{R})-2-[[2-[(3-cyanophenyl)methoxy]-4-[[3-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-methyl-phenyl]methoxy]-5-methyl-phenyl]methylamino]-3-oxidanyl-propanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C35 H34 N2 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-03-28 
_chem_comp.pdbx_modified_date                    2017-12-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        594.654 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8YZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5NIU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8YZ N1  N1  N 0 1 N N N -2.897 17.760 190.133 4.781   5.960  -2.875 N1  8YZ 1  
8YZ C15 C1  C 0 1 N N N -1.750 17.497 190.196 4.498   5.319  -1.982 C15 8YZ 2  
8YZ C14 C2  C 0 1 Y N N -0.498 17.239 190.443 4.142   4.510  -0.855 C14 8YZ 3  
8YZ C13 C3  C 0 1 Y N N 0.199  17.968 191.406 4.488   4.914  0.436  C13 8YZ 4  
8YZ C12 C4  C 0 1 Y N N 1.526  17.631 191.695 4.141   4.130  1.517  C12 8YZ 5  
8YZ C11 C5  C 0 1 Y N N 2.169  16.625 191.026 3.453   2.946  1.324  C11 8YZ 6  
8YZ C16 C6  C 0 1 Y N N 0.147  16.173 189.794 3.441   3.316  -1.042 C16 8YZ 7  
8YZ C10 C7  C 0 1 Y N N 1.499  15.901 190.075 3.107   2.539  0.047  C10 8YZ 8  
8YZ C9  C8  C 0 1 N N N 2.286  14.805 189.441 2.352   1.250  -0.153 C9  8YZ 9  
8YZ O3  O1  O 0 1 N N N 1.594  13.612 189.726 3.279   0.178  -0.333 O3  8YZ 10 
8YZ C8  C9  C 0 1 Y N N 1.928  12.447 189.113 2.758   -1.062 -0.527 C8  8YZ 11 
8YZ C4  C10 C 0 1 Y N N 0.982  11.314 189.294 3.601   -2.149 -0.708 C4  8YZ 12 
8YZ C3  C11 C 0 1 N N N -0.196 11.527 190.169 5.095   -1.954 -0.690 C3  8YZ 13 
8YZ N   N2  N 0 1 N N N 0.378  11.341 191.522 5.562   -1.871 0.701  N   8YZ 14 
8YZ C1  C12 C 0 1 N N R -0.730 11.217 192.520 7.017   -1.681 0.757  C1  8YZ 15 
8YZ C2  C13 C 0 1 N N N -1.701 10.044 192.263 7.337   -0.213 0.631  C2  8YZ 16 
8YZ O2  O2  O 0 1 N N N -1.421 9.004  191.637 6.444   0.591  0.506  O2  8YZ 17 
8YZ O1  O3  O 0 1 N N N -2.927 10.157 192.756 8.614   0.200  0.656  O1  8YZ 18 
8YZ C   C14 C 0 1 N N N -0.019 11.129 193.870 7.548   -2.205 2.093  C   8YZ 19 
8YZ O   O4  O 0 1 N N N 0.539  12.399 194.237 7.022   -1.413 3.159  O   8YZ 20 
8YZ C17 C15 C 0 1 Y N N 3.080  12.288 188.293 1.384   -1.243 -0.538 C17 8YZ 21 
8YZ C18 C16 C 0 1 Y N N 3.302  11.027 187.678 0.855   -2.511 -0.730 C18 8YZ 22 
8YZ C6  C17 C 0 1 Y N N 2.329  9.881  187.923 1.702   -3.594 -0.911 C6  8YZ 23 
8YZ C7  C18 C 0 1 N N N 2.527  8.502  187.297 1.129   -4.972 -1.120 C7  8YZ 24 
8YZ C5  C19 C 0 1 Y N N 1.215  10.077 188.738 3.072   -3.410 -0.905 C5  8YZ 25 
8YZ O4  O5  O 0 1 N N N 4.375  10.862 186.889 -0.492  -2.692 -0.736 O4  8YZ 26 
8YZ C19 C20 C 0 1 N N N 5.484  11.691 187.409 -1.303  -1.532 -0.544 C19 8YZ 27 
8YZ C20 C21 C 0 1 Y N N 6.623  11.147 186.722 -2.758  -1.924 -0.581 C20 8YZ 28 
8YZ C34 C22 C 0 1 Y N N 6.436  10.358 185.648 -3.111  -3.248 -0.774 C34 8YZ 29 
8YZ C33 C23 C 0 1 Y N N 7.476  9.804  185.006 -4.444  -3.616 -0.804 C33 8YZ 30 
8YZ C32 C24 C 0 1 Y N N 8.757  10.093 185.426 -5.429  -2.664 -0.641 C32 8YZ 31 
8YZ C23 C25 C 0 1 Y N N 9.024  10.896 186.485 -5.080  -1.329 -0.446 C23 8YZ 32 
8YZ C21 C26 C 0 1 Y N N 7.943  11.477 187.169 -3.735  -0.964 -0.417 C21 8YZ 33 
8YZ C22 C27 C 0 1 N N N 8.193  12.361 188.313 -3.349  0.477  -0.201 C22 8YZ 34 
8YZ C24 C28 C 0 1 Y N N 10.473 11.147 186.855 -6.135  -0.301 -0.270 C24 8YZ 35 
8YZ C31 C29 C 0 1 Y N N 11.051 10.707 188.057 -6.176  0.807  -1.114 C31 8YZ 36 
8YZ C30 C30 C 0 1 Y N N 12.445 10.942 188.289 -7.158  1.763  -0.948 C30 8YZ 37 
8YZ C27 C31 C 0 1 Y N N 13.179 11.626 187.327 -8.105  1.625  0.056  C27 8YZ 38 
8YZ O5  O6  O 0 1 N N N 14.532 11.892 187.424 -9.063  2.582  0.204  O5  8YZ 39 
8YZ C28 C32 C 0 1 N N N 15.414 12.192 186.308 -10.214 2.226  0.977  C28 8YZ 40 
8YZ C29 C33 C 0 1 N N N 14.734 13.171 185.425 -9.737  1.532  2.260  C29 8YZ 41 
8YZ O6  O7  O 0 1 N N N 13.380 12.695 185.139 -8.994  0.366  1.888  O6  8YZ 42 
8YZ C26 C34 C 0 1 Y N N 12.571 12.053 186.069 -8.070  0.519  0.900  C26 8YZ 43 
8YZ C25 C35 C 0 1 Y N N 11.201 11.848 185.871 -7.089  -0.445 0.734  C25 8YZ 44 
8YZ H1  H1  H 0 1 N N N -0.281 18.785 191.924 5.025   5.838  0.588  H1  8YZ 45 
8YZ H2  H2  H 0 1 N N N 2.054  18.177 192.463 4.407   4.442  2.516  H2  8YZ 46 
8YZ H3  H3  H 0 1 N N N 3.202  16.402 191.247 3.184   2.336  2.174  H3  8YZ 47 
8YZ H4  H4  H 0 1 N N N -0.392 15.565 189.083 3.171   2.998  -2.038 H4  8YZ 48 
8YZ H5  H5  H 0 1 N N N 3.300  14.769 189.865 1.733   1.052  0.723  H5  8YZ 49 
8YZ H6  H6  H 0 1 N N N 2.349  14.960 188.354 1.717   1.334  -1.035 H6  8YZ 50 
8YZ H7  H7  H 0 1 N N N -0.606 12.540 190.046 5.578   -2.797 -1.185 H7  8YZ 51 
8YZ H8  H8  H 0 1 N N N -0.983 10.786 189.965 5.348   -1.032 -1.214 H8  8YZ 52 
8YZ H9  H9  H 0 1 N N N 0.935  10.510 191.537 5.081   -1.138 1.200  H9  8YZ 53 
8YZ H11 H11 H 0 1 N N N -1.316 12.148 192.505 7.487   -2.227 -0.060 H11 8YZ 54 
8YZ H12 H12 H 0 1 N N N -3.428 9.379  192.541 8.769   1.150  0.572  H12 8YZ 55 
8YZ H13 H13 H 0 1 N N N -0.742 10.817 194.638 7.240   -3.242 2.225  H13 8YZ 56 
8YZ H14 H14 H 0 1 N N N 0.789  10.386 193.804 8.637   -2.145 2.100  H14 8YZ 57 
8YZ H15 H15 H 0 1 N N N 0.975  12.323 195.077 7.317   -1.689 4.037  H15 8YZ 58 
8YZ H16 H16 H 0 1 N N N 3.769  13.106 188.142 0.726   -0.399 -0.396 H16 8YZ 59 
8YZ H17 H17 H 0 1 N N N 3.128  7.875  187.972 0.978   -5.145 -2.186 H17 8YZ 60 
8YZ H18 H18 H 0 1 N N N 1.547  8.030  187.134 1.820   -5.717 -0.726 H18 8YZ 61 
8YZ H19 H19 H 0 1 N N N 3.048  8.608  186.334 0.174   -5.051 -0.601 H19 8YZ 62 
8YZ H20 H20 H 0 1 N N N 0.536  9.260  188.933 3.730   -4.255 -1.046 H20 8YZ 63 
8YZ H21 H21 H 0 1 N N N 5.586  11.581 188.499 -1.073  -1.083 0.422  H21 8YZ 64 
8YZ H22 H22 H 0 1 N N N 5.338  12.752 187.160 -1.101  -0.811 -1.337 H22 8YZ 65 
8YZ H23 H23 H 0 1 N N N 5.433  10.168 185.297 -2.343  -3.996 -0.902 H23 8YZ 66 
8YZ H24 H24 H 0 1 N N N 7.312  9.140  184.170 -4.714  -4.651 -0.956 H24 8YZ 67 
8YZ H25 H25 H 0 1 N N N 9.586  9.660  184.886 -6.470  -2.953 -0.665 H25 8YZ 68 
8YZ H26 H26 H 0 1 N N N 8.279  13.400 187.962 -3.329  0.995  -1.159 H26 8YZ 69 
8YZ H27 H27 H 0 1 N N N 7.359  12.282 189.026 -4.077  0.954  0.455  H27 8YZ 70 
8YZ H28 H28 H 0 1 N N N 9.129  12.063 188.809 -2.362  0.523  0.258  H28 8YZ 71 
8YZ H29 H29 H 0 1 N N N 10.452 10.198 188.797 -5.441  0.918  -1.896 H29 8YZ 72 
8YZ H30 H30 H 0 1 N N N 12.917 10.594 189.196 -7.189  2.621  -1.603 H30 8YZ 73 
8YZ H31 H31 H 0 1 N N N 15.629 11.271 185.746 -10.777 3.124  1.232  H31 8YZ 74 
8YZ H32 H32 H 0 1 N N N 16.355 12.621 186.683 -10.846 1.547  0.404  H32 8YZ 75 
8YZ H33 H33 H 0 1 N N N 15.296 13.272 184.485 -9.099  2.209  2.828  H33 8YZ 76 
8YZ H34 H34 H 0 1 N N N 14.683 14.148 185.928 -10.597 1.243  2.864  H34 8YZ 77 
8YZ H35 H35 H 0 1 N N N 10.711 12.219 184.983 -7.062  -1.305 1.387  H35 8YZ 78 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8YZ C33 C32 DOUB Y N 1  
8YZ C33 C34 SING Y N 2  
8YZ O6  C29 SING N N 3  
8YZ O6  C26 SING N N 4  
8YZ C29 C28 SING N N 5  
8YZ C32 C23 SING Y N 6  
8YZ C34 C20 DOUB Y N 7  
8YZ C25 C26 DOUB Y N 8  
8YZ C25 C24 SING Y N 9  
8YZ C26 C27 SING Y N 10 
8YZ C28 O5  SING N N 11 
8YZ C23 C24 SING N N 12 
8YZ C23 C21 DOUB Y N 13 
8YZ C20 C21 SING Y N 14 
8YZ C20 C19 SING N N 15 
8YZ C24 C31 DOUB Y N 16 
8YZ O4  C19 SING N N 17 
8YZ O4  C18 SING N N 18 
8YZ C21 C22 SING N N 19 
8YZ C7  C6  SING N N 20 
8YZ C27 O5  SING N N 21 
8YZ C27 C30 DOUB Y N 22 
8YZ C18 C6  DOUB Y N 23 
8YZ C18 C17 SING Y N 24 
8YZ C6  C5  SING Y N 25 
8YZ C31 C30 SING Y N 26 
8YZ C17 C8  DOUB Y N 27 
8YZ C5  C4  DOUB Y N 28 
8YZ C8  C4  SING Y N 29 
8YZ C8  O3  SING N N 30 
8YZ C4  C3  SING N N 31 
8YZ C9  O3  SING N N 32 
8YZ C9  C10 SING N N 33 
8YZ C16 C10 DOUB Y N 34 
8YZ C16 C14 SING Y N 35 
8YZ C10 C11 SING Y N 36 
8YZ N1  C15 TRIP N N 37 
8YZ C3  N   SING N N 38 
8YZ C15 C14 SING N N 39 
8YZ C14 C13 DOUB Y N 40 
8YZ C11 C12 DOUB Y N 41 
8YZ C13 C12 SING Y N 42 
8YZ N   C1  SING N N 43 
8YZ O2  C2  DOUB N N 44 
8YZ C2  C1  SING N N 45 
8YZ C2  O1  SING N N 46 
8YZ C1  C   SING N N 47 
8YZ C   O   SING N N 48 
8YZ C13 H1  SING N N 49 
8YZ C12 H2  SING N N 50 
8YZ C11 H3  SING N N 51 
8YZ C16 H4  SING N N 52 
8YZ C9  H5  SING N N 53 
8YZ C9  H6  SING N N 54 
8YZ C3  H7  SING N N 55 
8YZ C3  H8  SING N N 56 
8YZ N   H9  SING N N 57 
8YZ C1  H11 SING N N 58 
8YZ O1  H12 SING N N 59 
8YZ C   H13 SING N N 60 
8YZ C   H14 SING N N 61 
8YZ O   H15 SING N N 62 
8YZ C17 H16 SING N N 63 
8YZ C7  H17 SING N N 64 
8YZ C7  H18 SING N N 65 
8YZ C7  H19 SING N N 66 
8YZ C5  H20 SING N N 67 
8YZ C19 H21 SING N N 68 
8YZ C19 H22 SING N N 69 
8YZ C34 H23 SING N N 70 
8YZ C33 H24 SING N N 71 
8YZ C32 H25 SING N N 72 
8YZ C22 H26 SING N N 73 
8YZ C22 H27 SING N N 74 
8YZ C22 H28 SING N N 75 
8YZ C31 H29 SING N N 76 
8YZ C30 H30 SING N N 77 
8YZ C28 H31 SING N N 78 
8YZ C28 H32 SING N N 79 
8YZ C29 H33 SING N N 80 
8YZ C29 H34 SING N N 81 
8YZ C25 H35 SING N N 82 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8YZ InChI            InChI                1.03  
"InChI=1S/C35H34N2O7/c1-22-13-28(18-37-30(19-38)35(39)40)33(43-20-25-6-3-5-24(14-25)17-36)16-32(22)44-21-27-7-4-8-29(23(27)2)26-9-10-31-34(15-26)42-12-11-41-31/h3-10,13-16,30,37-38H,11-12,18-21H2,1-2H3,(H,39,40)/t30-/m1/s1" 
8YZ InChIKey         InChI                1.03  UWNXGZKSIKQKAH-SSEXGKCCSA-N 
8YZ SMILES_CANONICAL CACTVS               3.385 "Cc1cc(CN[C@H](CO)C(O)=O)c(OCc2cccc(c2)C#N)cc1OCc3cccc(c3C)c4ccc5OCCOc5c4" 
8YZ SMILES           CACTVS               3.385 "Cc1cc(CN[CH](CO)C(O)=O)c(OCc2cccc(c2)C#N)cc1OCc3cccc(c3C)c4ccc5OCCOc5c4" 
8YZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc(c(cc1OCc2cccc(c2C)c3ccc4c(c3)OCCO4)OCc5cccc(c5)C#N)CN[C@H](CO)C(=O)O" 
8YZ SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1cc(c(cc1OCc2cccc(c2C)c3ccc4c(c3)OCCO4)OCc5cccc(c5)C#N)CNC(CO)C(=O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8YZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R})-2-[[2-[(3-cyanophenyl)methoxy]-4-[[3-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-methyl-phenyl]methoxy]-5-methyl-phenyl]methylamino]-3-oxidanyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8YZ "Create component" 2017-03-28 EBI  
8YZ "Initial release"  2017-12-06 RCSB 
# 
