data_7YZ
# 
_chem_comp.id                                    7YZ 
_chem_comp.name                                  "N-{[(3-chlorophenyl)methoxy]carbonyl}-L-valyl-3-cyclohexyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H43 Cl N4 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-08-23 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        579.128 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7YZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7RW0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7YZ C1  C1  C  0 1 Y N N N N N -5.749  -20.638 -17.717 6.822  -0.059 0.650  C1  7YZ 1  
7YZ C11 C2  C  0 1 N N S N N N -9.910  -17.419 -18.348 0.975  1.594  0.664  C11 7YZ 2  
7YZ C12 C3  C  0 1 N N N N N N -10.076 -16.139 -17.590 -0.232 0.803  0.233  C12 7YZ 3  
7YZ C13 C4  C  0 1 N N N N N N -7.587  -12.416 -17.929 -1.304 -1.947 0.903  C13 7YZ 4  
7YZ C14 C5  C  0 1 N N S N N N -9.807  -13.735 -17.613 -2.571 0.166  0.486  C14 7YZ 5  
7YZ C15 C6  C  0 1 N N N N N N -11.257 -13.314 -17.590 -3.844 0.914  0.788  C15 7YZ 6  
7YZ C16 C7  C  0 1 N N N N N N -6.865  -13.624 -17.319 -1.198 -3.179 1.804  C16 7YZ 7  
7YZ C17 C8  C  0 1 N N S N N N -13.154 -12.328 -16.478 -6.275 1.066  0.834  C17 7YZ 8  
7YZ C18 C9  C  0 1 N N N N N N -5.411  -13.347 -16.920 0.032  -3.998 1.406  C18 7YZ 9  
7YZ C19 C10 C  0 1 N N N N N N -14.055 -13.157 -15.547 -7.402 0.535  -0.055 C19 7YZ 10 
7YZ C2  C11 C  0 1 Y N N N N N -6.290  -21.911 -17.922 7.601  0.493  -0.349 C2  7YZ 11 
7YZ C20 C12 C  0 1 N N S N N N -14.098 -14.647 -15.926 -7.086 0.847  -1.519 C20 7YZ 12 
7YZ C21 C13 C  0 1 N N N N N N -14.785 -14.901 -17.265 -8.226 0.347  -2.437 C21 7YZ 13 
7YZ C22 C14 C  0 1 N N N N N N -15.605 -16.185 -17.069 -7.713 -1.053 -2.840 C22 7YZ 14 
7YZ C23 C15 C  0 1 N N N N N N -4.743  -12.211 -17.692 -0.101 -4.441 -0.053 C23 7YZ 15 
7YZ C24 C16 C  0 1 N N N N N N -14.898 -15.513 -14.969 -5.872 0.069  -1.977 C24 7YZ 16 
7YZ C25 C17 C  0 1 N N N N N N -5.302  -12.089 -19.098 -0.207 -3.209 -0.953 C25 7YZ 17 
7YZ C26 C18 C  0 1 N N N N N N -6.793  -11.740 -19.048 -1.436 -2.390 -0.555 C26 7YZ 18 
7YZ C3  C19 C  0 1 Y N N N N N -6.005  -22.577 -19.124 8.647  -0.233 -0.890 C3  7YZ 19 
7YZ C30 C20 C  0 1 N N N N N N -11.268 -18.023 -18.698 0.925  2.987  0.034  C30 7YZ 20 
7YZ C31 C21 C  0 1 N N N N N N -11.071 -19.326 -19.469 2.096  3.824  0.551  C31 7YZ 21 
7YZ C32 C22 C  0 1 N N N N N N -12.167 -17.050 -19.454 1.020  2.861  -1.488 C32 7YZ 22 
7YZ C34 C23 C  0 1 N N N N N N -8.987  -12.762 -18.464 -2.534 -1.128 1.301  C34 7YZ 23 
7YZ C4  C24 C  0 1 Y N N N N N -5.197  -21.990 -20.091 8.913  -1.511 -0.431 C4  7YZ 24 
7YZ C5  C25 C  0 1 Y N N N N N -4.659  -20.735 -19.873 8.133  -2.062 0.568  C5  7YZ 25 
7YZ C6  C26 C  0 1 Y N N N N N -4.940  -20.062 -18.692 7.091  -1.334 1.113  C6  7YZ 26 
7YZ C7  C27 C  0 1 N N N N N N -6.004  -19.848 -16.460 5.683  0.731  1.240  C7  7YZ 27 
7YZ C8  C28 C  0 1 N N N N N N -13.115 -10.841 -16.093 -6.648 0.865  2.305  C8  7YZ 28 
7YZ C9  C29 C  0 1 N N N N N N -7.891  -18.463 -17.482 3.352  1.103  0.886  C9  7YZ 29 
7YZ N10 N1  N  0 1 N N N N N N -9.216  -18.370 -17.525 2.192  0.905  0.228  N10 7YZ 30 
7YZ N13 N2  N  0 1 N N N N N N -9.674  -15.044 -18.225 -1.419 0.999  0.841  N13 7YZ 31 
7YZ N16 N3  N  0 1 N N N N N N -11.779 -12.815 -16.471 -5.037 0.339  0.541  N16 7YZ 32 
7YZ N23 N4  N  0 1 N N N N N N -15.715 -16.328 -15.633 -6.252 -0.986 -2.719 N23 7YZ 33 
7YZ O26 O1  O  0 1 N N N N N N -14.768 -15.487 -13.748 -4.724 0.355  -1.713 O26 7YZ 34 
7YZ O29 O2  O  0 1 N N N N N N -7.151  -17.880 -18.259 3.388  1.854  1.841  O29 7YZ 35 
7YZ O33 O3  O  0 1 N N N N N N -10.560 -16.118 -16.461 -0.136 -0.011 -0.661 O33 7YZ 36 
7YZ O38 O4  O  0 1 N N N N N N -11.955 -13.442 -18.586 -3.794 2.033  1.254  O38 7YZ 37 
7YZ O8  O5  O  0 1 N N N N N N -7.336  -19.313 -16.440 4.470  0.470  0.485  O8  7YZ 38 
7YZ O9  O6  O  0 1 N N N N N N -14.443 -10.303 -16.012 -6.954 -0.512 2.535  O9  7YZ 39 
7YZ CL7 CL1 CL 0 0 N N N N N N -6.660  -24.213 -19.483 9.626  0.459  -2.146 CL7 7YZ 40 
7YZ H1  H1  H  0 1 N N N N N N -9.348  -17.229 -19.275 0.980  1.687  1.751  H1  7YZ 41 
7YZ H2  H2  H  0 1 N N N N N N -7.719  -11.675 -17.127 -0.408 -1.336 1.017  H2  7YZ 42 
7YZ H3  H3  H  0 1 N N N N N N -9.409  -13.747 -16.588 -2.533 -0.073 -0.577 H3  7YZ 43 
7YZ H4  H4  H  0 1 N N N N N N -7.416  -13.938 -16.420 -1.104 -2.863 2.842  H4  7YZ 44 
7YZ H5  H5  H  0 1 N N N N N N -6.871  -14.439 -18.057 -2.093 -3.790 1.690  H5  7YZ 45 
7YZ H6  H6  H  0 1 N N N N N N -13.557 -12.405 -17.499 -6.128 2.128  0.639  H6  7YZ 46 
7YZ H7  H7  H  0 1 N N N N N N -4.829  -14.265 -17.089 0.927  -3.387 1.519  H7  7YZ 47 
7YZ H8  H8  H  0 1 N N N N N N -5.392  -13.092 -15.850 0.107  -4.876 2.047  H8  7YZ 48 
7YZ H9  H9  H  0 1 N N N N N N -13.674 -13.067 -14.519 -7.490 -0.544 0.076  H9  7YZ 49 
7YZ H10 H10 H  0 1 N N N N N N -15.077 -12.753 -15.596 -8.341 1.012  0.225  H10 7YZ 50 
7YZ H11 H11 H  0 1 N N N N N N -6.914  -22.372 -17.171 7.393  1.490  -0.708 H11 7YZ 51 
7YZ H12 H12 H  0 1 N N N N N N -13.067 -15.028 -15.977 -6.926 1.917  -1.654 H12 7YZ 52 
7YZ H13 H13 H  0 1 N N N N N N -14.038 -15.040 -18.060 -9.165 0.276  -1.888 H13 7YZ 53 
7YZ H14 H14 H  0 1 N N N N N N -15.444 -14.060 -17.524 -8.334 0.990  -3.310 H14 7YZ 54 
7YZ H15 H15 H  0 1 N N N N N N -16.600 -16.085 -17.527 -8.114 -1.810 -2.166 H15 7YZ 55 
7YZ H16 H16 H  0 1 N N N N N N -15.085 -17.049 -17.507 -7.996 -1.276 -3.869 H16 7YZ 56 
7YZ H17 H17 H  0 1 N N N N N N -3.662  -12.407 -17.753 0.775  -5.024 -0.336 H17 7YZ 57 
7YZ H18 H18 H  0 1 N N N N N N -4.914  -11.266 -17.156 -0.996 -5.052 -0.167 H18 7YZ 58 
7YZ H19 H19 H  0 1 N N N N N N -5.170  -13.045 -19.625 0.689  -2.598 -0.839 H19 7YZ 59 
7YZ H20 H20 H  0 1 N N N N N N -4.761  -11.296 -19.636 -0.301 -3.525 -1.992 H20 7YZ 60 
7YZ H21 H21 H  0 1 N N N N N N -6.883  -10.651 -18.918 -2.332 -3.001 -0.669 H21 7YZ 61 
7YZ H22 H22 H  0 1 N N N N N N -7.243  -12.033 -20.008 -1.512 -1.512 -1.196 H22 7YZ 62 
7YZ H23 H23 H  0 1 N N N N N N -11.772 -18.272 -17.752 -0.014 3.473  0.300  H23 7YZ 63 
7YZ H24 H24 H  0 1 N N N N N N -10.419 -19.999 -18.893 3.034  3.395  0.196  H24 7YZ 64 
7YZ H25 H25 H  0 1 N N N N N N -12.047 -19.809 -19.628 2.003  4.846  0.183  H25 7YZ 65 
7YZ H26 H26 H  0 1 N N N N N N -10.606 -19.109 -20.442 2.088  3.828  1.641  H26 7YZ 66 
7YZ H27 H27 H  0 1 N N N N N N -12.284 -16.127 -18.868 0.185  2.265  -1.857 H27 7YZ 67 
7YZ H28 H28 H  0 1 N N N N N N -11.712 -16.811 -20.427 0.984  3.854  -1.938 H28 7YZ 68 
7YZ H29 H29 H  0 1 N N N N N N -13.153 -17.510 -19.613 1.959  2.376  -1.755 H29 7YZ 69 
7YZ H30 H30 H  0 1 N N N N N N -9.557  -11.825 -18.548 -3.435 -1.708 1.104  H30 7YZ 70 
7YZ H31 H31 H  0 1 N N N N N N -8.866  -13.208 -19.462 -2.482 -0.888 2.363  H31 7YZ 71 
7YZ H32 H32 H  0 1 N N N N N N -4.990  -22.514 -21.012 9.726  -2.080 -0.856 H32 7YZ 72 
7YZ H33 H33 H  0 1 N N N N N N -4.023  -20.280 -20.618 8.340  -3.059 0.927  H33 7YZ 73 
7YZ H34 H34 H  0 1 N N N N N N -4.525  -19.078 -18.528 6.482  -1.764 1.894  H34 7YZ 74 
7YZ H35 H35 H  0 1 N N N N N N -5.870  -20.507 -15.589 5.535  0.436  2.279  H35 7YZ 75 
7YZ H36 H36 H  0 1 N N N N N N -5.284  -19.018 -16.406 5.917  1.795  1.195  H36 7YZ 76 
7YZ H37 H37 H  0 1 N N N N N N -12.622 -10.734 -15.116 -5.810 1.161  2.936  H37 7YZ 77 
7YZ H38 H38 H  0 1 N Y N N N N -12.546 -10.286 -16.854 -7.518 1.476  2.545  H38 7YZ 78 
7YZ H39 H39 H  0 1 N N N N N N -9.756  -18.992 -16.957 2.164  0.305  -0.534 H39 7YZ 79 
7YZ H40 H40 H  0 1 N N N N N N -9.274  -15.123 -19.138 -1.511 1.693  1.513  H40 7YZ 80 
7YZ H41 H41 H  0 1 N N N N N N -11.233 -12.775 -15.634 -5.077 -0.556 0.169  H41 7YZ 81 
7YZ H42 H42 H  0 1 N N N N N N -16.338 -16.970 -15.187 -5.640 -1.620 -3.122 H42 7YZ 82 
7YZ H43 H43 H  0 1 N N N N N N -14.399 -9.385  -15.773 -7.200 -0.713 3.448  H43 7YZ 83 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7YZ C4  C5  DOUB Y N 1  
7YZ C4  C3  SING Y N 2  
7YZ C5  C6  SING Y N 3  
7YZ CL7 C3  SING N N 4  
7YZ C31 C30 SING N N 5  
7YZ C32 C30 SING N N 6  
7YZ C3  C2  DOUB Y N 7  
7YZ C25 C26 SING N N 8  
7YZ C25 C23 SING N N 9  
7YZ C26 C13 SING N N 10 
7YZ C30 C11 SING N N 11 
7YZ C6  C1  DOUB Y N 12 
7YZ O38 C15 DOUB N N 13 
7YZ C34 C13 SING N N 14 
7YZ C34 C14 SING N N 15 
7YZ C11 C12 SING N N 16 
7YZ C11 N10 SING N N 17 
7YZ O29 C9  DOUB N N 18 
7YZ N13 C14 SING N N 19 
7YZ N13 C12 SING N N 20 
7YZ C13 C16 SING N N 21 
7YZ C2  C1  SING Y N 22 
7YZ C1  C7  SING N N 23 
7YZ C23 C18 SING N N 24 
7YZ C14 C15 SING N N 25 
7YZ C15 N16 SING N N 26 
7YZ C12 O33 DOUB N N 27 
7YZ N10 C9  SING N N 28 
7YZ C9  O8  SING N N 29 
7YZ C16 C18 SING N N 30 
7YZ C21 C22 SING N N 31 
7YZ C21 C20 SING N N 32 
7YZ C22 N23 SING N N 33 
7YZ C17 N16 SING N N 34 
7YZ C17 C8  SING N N 35 
7YZ C17 C19 SING N N 36 
7YZ C7  O8  SING N N 37 
7YZ C8  O9  SING N N 38 
7YZ C20 C19 SING N N 39 
7YZ C20 C24 SING N N 40 
7YZ N23 C24 SING N N 41 
7YZ C24 O26 DOUB N N 42 
7YZ C11 H1  SING N N 43 
7YZ C13 H2  SING N N 44 
7YZ C14 H3  SING N N 45 
7YZ C16 H4  SING N N 46 
7YZ C16 H5  SING N N 47 
7YZ C17 H6  SING N N 48 
7YZ C18 H7  SING N N 49 
7YZ C18 H8  SING N N 50 
7YZ C19 H9  SING N N 51 
7YZ C19 H10 SING N N 52 
7YZ C2  H11 SING N N 53 
7YZ C20 H12 SING N N 54 
7YZ C21 H13 SING N N 55 
7YZ C21 H14 SING N N 56 
7YZ C22 H15 SING N N 57 
7YZ C22 H16 SING N N 58 
7YZ C23 H17 SING N N 59 
7YZ C23 H18 SING N N 60 
7YZ C25 H19 SING N N 61 
7YZ C25 H20 SING N N 62 
7YZ C26 H21 SING N N 63 
7YZ C26 H22 SING N N 64 
7YZ C30 H23 SING N N 65 
7YZ C31 H24 SING N N 66 
7YZ C31 H25 SING N N 67 
7YZ C31 H26 SING N N 68 
7YZ C32 H27 SING N N 69 
7YZ C32 H28 SING N N 70 
7YZ C32 H29 SING N N 71 
7YZ C34 H30 SING N N 72 
7YZ C34 H31 SING N N 73 
7YZ C4  H32 SING N N 74 
7YZ C5  H33 SING N N 75 
7YZ C6  H34 SING N N 76 
7YZ C7  H35 SING N N 77 
7YZ C7  H36 SING N N 78 
7YZ C8  H37 SING N N 79 
7YZ C8  H38 SING N N 80 
7YZ N10 H39 SING N N 81 
7YZ N13 H40 SING N N 82 
7YZ N16 H41 SING N N 83 
7YZ N23 H42 SING N N 84 
7YZ O9  H43 SING N N 85 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7YZ SMILES           ACDLabs              12.01 "CC(C)C(NC(=O)OCc1cccc(Cl)c1)C(=O)NC(CC1CCCCC1)C(=O)NC(CC1CCNC1=O)CO"                                                                                                                                                                                                  
7YZ InChI            InChI                1.03  "InChI=1S/C29H43ClN4O6/c1-18(2)25(34-29(39)40-17-20-9-6-10-22(30)13-20)28(38)33-24(14-19-7-4-3-5-8-19)27(37)32-23(16-35)15-21-11-12-31-26(21)36/h6,9-10,13,18-19,21,23-25,35H,3-5,7-8,11-12,14-17H2,1-2H3,(H,31,36)(H,32,37)(H,33,38)(H,34,39)/t21-,23-,24-,25-/m0/s1" 
7YZ InChIKey         InChI                1.03  KPOIPVBFQVQSRG-LFBFJMOVSA-N                                                                                                                                                                                                                                            
7YZ SMILES_CANONICAL CACTVS               3.385 "CC(C)[C@H](NC(=O)OCc1cccc(Cl)c1)C(=O)N[C@@H](CC2CCCCC2)C(=O)N[C@H](CO)C[C@@H]3CCNC3=O"                                                                                                                                                                                
7YZ SMILES           CACTVS               3.385 "CC(C)[CH](NC(=O)OCc1cccc(Cl)c1)C(=O)N[CH](CC2CCCCC2)C(=O)N[CH](CO)C[CH]3CCNC3=O"                                                                                                                                                                                      
7YZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H](C(=O)N[C@@H](CC1CCCCC1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)CO)NC(=O)OCc3cccc(c3)Cl"                                                                                                                                                                              
7YZ SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)C(C(=O)NC(CC1CCCCC1)C(=O)NC(CC2CCNC2=O)CO)NC(=O)OCc3cccc(c3)Cl"                                                                                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7YZ "SYSTEMATIC NAME" ACDLabs              12.01 "N-{[(3-chlorophenyl)methoxy]carbonyl}-L-valyl-3-cyclohexyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide"                                                                                              
7YZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3-chlorophenyl)methyl ~{N}-[(2~{S})-1-[[(2~{S})-3-cyclohexyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]propan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7YZ "Create component" 2021-08-23 RCSB 
7YZ "Initial release"  2022-07-20 RCSB 
7YZ "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            7YZ 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C8 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
