data_LMY
#

_chem_comp.id                                   LMY
_chem_comp.name                                 "~{N}-[3-[[2-cyano-4-methyl-5-[[4-[[2-(methylamino)-6-[2,2,2-tris(fluoranyl)ethyl]thieno[2,3-d]pyrimidin-4-yl]amino]piperidin-1-yl]methyl]indol-1-yl]methyl]-1-bicyclo[1.1.1]pentanyl]methanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C32 H35 F3 N8 O S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-04
_chem_comp.pdbx_modified_date                   2020-01-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       636.734
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LMY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6O5I
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LMY  C10  C1   C  0  1  N  N  N   7.264   8.039  -13.414  -6.498   3.653   0.053  C10  LMY   1  
LMY  C20  C2   C  0  1  N  N  N  13.403  14.681  -12.020  -0.798  -3.433  -0.686  C20  LMY   2  
LMY  C22  C3   C  0  1  N  N  N  13.172  14.041   -9.731   0.400  -2.128   0.967  C22  LMY   3  
LMY  C24  C4   C  0  1  N  N  N  14.028  16.132  -10.237   1.584  -3.746  -0.391  C24  LMY   4  
LMY  C26  C5   C  0  1  Y  N  N  15.338  17.770  -11.743   3.285  -2.372  -1.570  C26  LMY   5  
LMY  C28  C6   C  0  1  Y  N  N  14.177  19.762  -12.681   5.313  -1.638  -0.453  C28  LMY   6  
LMY  C01  C7   C  0  1  Y  N  N  13.242   8.362  -11.727  -6.012  -2.469   1.173  C01  LMY   7  
LMY  C03  C8   C  0  1  Y  N  N  11.699  10.124  -11.916  -4.370  -0.918   0.693  C03  LMY   8  
LMY  C04  C9   C  0  1  Y  N  N  10.726   9.191  -12.325  -5.364   0.092   0.608  C04  LMY   9  
LMY  C05  C10  C  0  1  Y  N  N  11.028   7.829  -12.462  -6.692  -0.286   0.815  C05  LMY  10  
LMY  C07  C11  C  0  1  Y  N  N   9.263   9.423  -12.691  -5.241   1.510   0.321  C07  LMY  11  
LMY  C08  C12  C  0  1  Y  N  N   8.726   8.143  -13.051  -6.379   2.175   0.319  C08  LMY  12  
LMY  C11  C13  C  0  1  N  N  N   6.489   7.665  -12.141  -6.689   3.889  -1.447  C11  LMY  13  
LMY  C16  C14  C  0  1  N  N  N  15.463   8.902  -10.760  -7.747  -4.148   1.687  C16  LMY  14  
LMY  C18  C15  C  0  1  N  N  N  12.394  12.463  -11.513  -2.021  -1.660   0.577  C18  LMY  15  
LMY  C19  C16  C  0  1  N  N  N  12.377  13.627  -12.427  -1.904  -2.378  -0.770  C19  LMY  16  
LMY  C23  C17  C  0  1  N  N  N  12.148  12.939  -10.120  -0.669  -1.035   0.933  C23  LMY  17  
LMY  C25  C18  C  0  1  Y  N  N  14.095  17.391  -11.106   2.893  -3.000  -0.423  C25  LMY  18  
LMY  C27  C19  C  0  1  Y  N  N  15.345  19.042  -12.554   4.504  -1.683  -1.605  C27  LMY  19  
LMY  C29  C20  C  0  1  Y  N  N  12.847  19.387  -12.043   4.890  -2.282   0.706  C29  LMY  20  
LMY  C30  C21  C  0  1  Y  N  N  12.908  18.175  -11.226   3.690  -2.958   0.714  C30  LMY  21  
LMY  C31  C22  C  0  1  Y  N  N  16.371  19.652  -13.219   5.180  -0.953  -2.613  C31  LMY  22  
LMY  C32  C23  C  0  1  Y  N  N  15.767  20.781  -13.775   6.344  -0.494  -2.081  C32  LMY  23  
LMY  C34  C24  C  0  1  N  N  N  13.483  21.860  -13.866   7.543  -0.610   0.145  C34  LMY  24  
LMY  C35  C25  C  0  1  N  N  N  13.475  22.934  -12.830   7.259   0.698   0.886  C35  LMY  25  
LMY  C36  C26  C  0  1  N  N  N  13.122  22.765  -11.346   6.077   1.054   1.821  C36  LMY  26  
LMY  C37  C27  C  0  1  N  N  N  13.190  24.301  -11.714   6.882   2.377   1.829  C37  LMY  27  
LMY  C38  C28  C  0  1  N  N  N  12.391  24.047  -12.982   7.037   2.119   0.309  C38  LMY  28  
LMY  C39  C29  C  0  1  N  N  N  14.567  23.969  -12.458   8.120   1.424   1.943  C39  LMY  29  
LMY  C41  C30  C  0  1  N  N  N  14.003  25.974   -9.985   7.428   4.681   2.405  C41  LMY  30  
LMY  C43  C31  C  0  1  N  N  N  16.606  16.953  -11.613   2.412  -2.426  -2.797  C43  LMY  31  
LMY  C44  C32  C  0  1  N  N  N  16.411  21.826  -14.609   7.320   0.292  -2.774  C44  LMY  32  
LMY  F12  F1   F  0  1  N  N  N   6.596   8.525  -11.129  -5.588   3.377  -2.142  F12  LMY  33  
LMY  F13  F2   F  0  1  N  N  N   6.842   6.463  -11.655  -7.853   3.242  -1.876  F13  LMY  34  
LMY  F14  F3   F  0  1  N  N  N   5.170   7.574  -12.383  -6.800   5.261  -1.693  F14  LMY  35  
LMY  N02  N1   N  0  1  Y  N  N  12.923   9.707  -11.573  -4.737  -2.159   0.973  N02  LMY  36  
LMY  N06  N2   N  0  1  Y  N  N  12.357   7.420  -12.167  -6.971  -1.566   1.099  N06  LMY  37  
LMY  N15  N3   N  0  1  N  N  N  14.525   7.959  -11.389  -6.346  -3.781   1.463  N15  LMY  38  
LMY  N17  N4   N  0  1  N  N  N  11.382  11.465  -11.834  -3.038  -0.610   0.487  N17  LMY  39  
LMY  N21  N5   N  0  1  N  N  N  13.135  15.177  -10.663   0.474  -2.785  -0.344  N21  LMY  40  
LMY  N33  N6   N  0  1  Y  N  N  14.440  20.833  -13.477   6.435  -0.905  -0.766  N33  LMY  41  
LMY  N40  N7   N  0  1  N  N  N  12.961  25.406  -10.784   6.592   3.632   2.528  N40  LMY  42  
LMY  N45  N8   N  0  1  N  N  N  16.852  22.618  -15.245   8.094   0.916  -3.324  N45  LMY  43  
LMY  O42  O1   O  0  1  N  N  N  15.103  25.554  -10.066   8.421   4.587   1.715  O42  LMY  44  
LMY  S09  S1   S  0  1  Y  N  N   9.813   6.895  -12.981  -7.737   1.119   0.662  S09  LMY  45  
LMY  H1   H1   H  0  1  N  N  N   6.905   9.004  -13.801  -7.356   4.051   0.595  H1   LMY  46  
LMY  H2   H2   H  0  1  N  N  N   7.123   7.262  -14.180  -5.592   4.157   0.388  H2   LMY  47  
LMY  H3   H3   H  0  1  N  N  N  14.408  14.235  -12.049  -1.051  -4.164   0.083  H3   LMY  48  
LMY  H4   H4   H  0  1  N  N  N  13.355  15.522  -12.727  -0.703  -3.936  -1.648  H4   LMY  49  
LMY  H5   H5   H  0  1  N  N  N  14.183  13.607   -9.740   1.367  -1.684   1.206  H5   LMY  50  
LMY  H6   H6   H  0  1  N  N  N  12.937  14.403   -8.719   0.142  -2.865   1.728  H6   LMY  51  
LMY  H7   H7   H  0  1  N  N  N  15.030  15.678  -10.217   1.494  -4.362  -1.285  H7   LMY  52  
LMY  H8   H8   H  0  1  N  N  N  13.743  16.435   -9.219   1.551  -4.382   0.494  H8   LMY  53  
LMY  H9   H9   H  0  1  N  N  N   8.736  10.366  -12.681  -4.290   1.984   0.126  H9   LMY  54  
LMY  H10  H10  H  0  1  N  N  N  16.421   8.396  -10.571  -7.814  -5.215   1.901  H10  LMY  55  
LMY  H11  H11  H  0  1  N  N  N  15.627   9.758  -11.431  -8.139  -3.583   2.533  H11  LMY  56  
LMY  H12  H12  H  0  1  N  N  N  15.042   9.257   -9.808  -8.330  -3.918   0.795  H12  LMY  57  
LMY  H13  H13  H  0  1  N  N  N  13.388  11.994  -11.554  -2.305  -2.376   1.349  H13  LMY  58  
LMY  H14  H14  H  0  1  N  N  N  11.375  14.080  -12.409  -1.658  -1.655  -1.548  H14  LMY  59  
LMY  H15  H15  H  0  1  N  N  N  12.605  13.283  -13.447  -2.851  -2.862  -1.008  H15  LMY  60  
LMY  H16  H16  H  0  1  N  N  N  11.130  13.351  -10.053  -0.734  -0.558   1.911  H16  LMY  61  
LMY  H17  H17  H  0  1  N  N  N  12.247  12.092   -9.425  -0.404  -0.290   0.182  H17  LMY  62  
LMY  H18  H18  H  0  1  N  N  N  11.943  19.962  -12.181   5.502  -2.255   1.596  H18  LMY  63  
LMY  H19  H19  H  0  1  N  N  N  12.022  17.862  -10.694   3.363  -3.456   1.615  H19  LMY  64  
LMY  H20  H20  H  0  1  N  N  N  17.401  19.337  -13.296   4.834  -0.790  -3.622  H20  LMY  65  
LMY  H21  H21  H  0  1  N  N  N  13.774  22.287  -14.837   8.467  -0.511  -0.425  H21  LMY  66  
LMY  H22  H22  H  0  1  N  N  N  12.479  21.417  -13.946   7.646  -1.421   0.867  H22  LMY  67  
LMY  H23  H23  H  0  1  N  N  N  12.143  22.334  -11.090   5.104   1.110   1.333  H23  LMY  68  
LMY  H24  H24  H  0  1  N  N  N  13.890  22.357  -10.672   6.063   0.517   2.770  H24  LMY  69  
LMY  H25  H25  H  0  1  N  N  N  12.496  24.762  -13.812   7.916   2.572  -0.148  H25  LMY  70  
LMY  H26  H26  H  0  1  N  N  N  11.335  23.758  -12.879   6.124   2.241  -0.273  H26  LMY  71  
LMY  H27  H27  H  0  1  N  N  N  15.421  23.633  -11.852   8.207   0.906   2.898  H27  LMY  72  
LMY  H28  H28  H  0  1  N  N  N  14.920  24.660  -13.238   9.063   1.824   1.571  H28  LMY  73  
LMY  H29  H29  H  0  1  N  N  N  13.783  26.786   -9.308   7.214   5.606   2.920  H29  LMY  74  
LMY  H30  H30  H  0  1  N  N  N  17.176  17.297  -10.737   1.659  -1.640  -2.741  H30  LMY  75  
LMY  H31  H31  H  0  1  N  N  N  16.347  15.891  -11.488   3.025  -2.279  -3.686  H31  LMY  76  
LMY  H32  H32  H  0  1  N  N  N  17.217  17.077  -12.519   1.920  -3.397  -2.851  H32  LMY  77  
LMY  H33  H33  H  0  1  N  N  N  14.427   7.189  -10.758  -5.654  -4.458   1.517  H33  LMY  78  
LMY  H34  H34  H  0  1  N  N  N  11.004  11.721  -12.723  -2.777   0.302   0.283  H34  LMY  79  
LMY  H36  H36  H  0  1  N  N  N  12.037  25.780  -10.703   5.798   3.707   3.080  H36  LMY  80  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LMY  N45  C44  TRIP  N  N   1  
LMY  C44  C32  SING  N  N   2  
LMY  C34  N33  SING  N  N   3  
LMY  C34  C35  SING  N  N   4  
LMY  C32  N33  SING  Y  N   5  
LMY  C32  C31  DOUB  Y  N   6  
LMY  N33  C28  SING  Y  N   7  
LMY  C10  C08  SING  N  N   8  
LMY  C10  C11  SING  N  N   9  
LMY  C31  C27  SING  Y  N  10  
LMY  C08  S09  SING  Y  N  11  
LMY  C08  C07  DOUB  Y  N  12  
LMY  C38  C35  SING  N  N  13  
LMY  C38  C37  SING  N  N  14  
LMY  S09  C05  SING  Y  N  15  
LMY  C35  C39  SING  N  N  16  
LMY  C35  C36  SING  N  N  17  
LMY  C07  C04  SING  Y  N  18  
LMY  C28  C27  DOUB  Y  N  19  
LMY  C28  C29  SING  Y  N  20  
LMY  C27  C26  SING  Y  N  21  
LMY  C05  C04  DOUB  Y  N  22  
LMY  C05  N06  SING  Y  N  23  
LMY  C39  C37  SING  N  N  24  
LMY  C19  C20  SING  N  N  25  
LMY  C19  C18  SING  N  N  26  
LMY  F14  C11  SING  N  N  27  
LMY  C04  C03  SING  Y  N  28  
LMY  N06  C01  DOUB  Y  N  29  
LMY  C11  F13  SING  N  N  30  
LMY  C11  F12  SING  N  N  31  
LMY  C29  C30  DOUB  Y  N  32  
LMY  C20  N21  SING  N  N  33  
LMY  C03  N17  SING  N  N  34  
LMY  C03  N02  DOUB  Y  N  35  
LMY  N17  C18  SING  N  N  36  
LMY  C26  C43  SING  N  N  37  
LMY  C26  C25  DOUB  Y  N  38  
LMY  C01  N02  SING  Y  N  39  
LMY  C01  N15  SING  N  N  40  
LMY  C37  C36  SING  N  N  41  
LMY  C37  N40  SING  N  N  42  
LMY  C18  C23  SING  N  N  43  
LMY  N15  C16  SING  N  N  44  
LMY  C30  C25  SING  Y  N  45  
LMY  C25  C24  SING  N  N  46  
LMY  N40  C41  SING  N  N  47  
LMY  N21  C24  SING  N  N  48  
LMY  N21  C22  SING  N  N  49  
LMY  C23  C22  SING  N  N  50  
LMY  O42  C41  DOUB  N  N  51  
LMY  C10  H1   SING  N  N  52  
LMY  C10  H2   SING  N  N  53  
LMY  C20  H3   SING  N  N  54  
LMY  C20  H4   SING  N  N  55  
LMY  C22  H5   SING  N  N  56  
LMY  C22  H6   SING  N  N  57  
LMY  C24  H7   SING  N  N  58  
LMY  C24  H8   SING  N  N  59  
LMY  C07  H9   SING  N  N  60  
LMY  C16  H10  SING  N  N  61  
LMY  C16  H11  SING  N  N  62  
LMY  C16  H12  SING  N  N  63  
LMY  C18  H13  SING  N  N  64  
LMY  C19  H14  SING  N  N  65  
LMY  C19  H15  SING  N  N  66  
LMY  C23  H16  SING  N  N  67  
LMY  C23  H17  SING  N  N  68  
LMY  C29  H18  SING  N  N  69  
LMY  C30  H19  SING  N  N  70  
LMY  C31  H20  SING  N  N  71  
LMY  C34  H21  SING  N  N  72  
LMY  C34  H22  SING  N  N  73  
LMY  C36  H23  SING  N  N  74  
LMY  C36  H24  SING  N  N  75  
LMY  C38  H25  SING  N  N  76  
LMY  C38  H26  SING  N  N  77  
LMY  C39  H27  SING  N  N  78  
LMY  C39  H28  SING  N  N  79  
LMY  C41  H29  SING  N  N  80  
LMY  C43  H30  SING  N  N  81  
LMY  C43  H31  SING  N  N  82  
LMY  C43  H32  SING  N  N  83  
LMY  N15  H33  SING  N  N  84  
LMY  N17  H34  SING  N  N  85  
LMY  N40  H36  SING  N  N  86  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LMY  InChI             InChI                 1.03   "InChI=1S/C32H35F3N8OS/c1-19-20(3-4-26-24(19)9-22(12-36)43(26)17-30-14-31(15-30,16-30)38-18-44)13-42-7-5-21(6-8-42)39-27-25-10-23(11-32(33,34)35)45-28(25)41-29(37-2)40-27/h3-4,9-10,18,21H,5-8,11,13-17H2,1-2H3,(H,38,44)(H2,37,39,40,41)/t30-,31+"  
LMY  InChIKey          InChI                 1.03   MBFYNGBMAACLAT-QRRGNZNSSA-N  
LMY  SMILES_CANONICAL  CACTVS                3.385  "CNc1nc(NC2CCN(CC2)Cc3ccc4n(CC56CC(C5)(C6)NC=O)c(cc4c3C)C#N)c7cc(CC(F)(F)F)sc7n1"  
LMY  SMILES            CACTVS                3.385  "CNc1nc(NC2CCN(CC2)Cc3ccc4n(CC56CC(C5)(C6)NC=O)c(cc4c3C)C#N)c7cc(CC(F)(F)F)sc7n1"  
LMY  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1c(ccc2c1cc(n2CC34CC(C3)(C4)NC=O)C#N)CN5CCC(CC5)Nc6c7cc(sc7nc(n6)NC)CC(F)(F)F"  
LMY  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1c(ccc2c1cc(n2CC34CC(C3)(C4)NC=O)C#N)CN5CCC(CC5)Nc6c7cc(sc7nc(n6)NC)CC(F)(F)F"  
#
_pdbx_chem_comp_identifier.comp_id          LMY
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[3-[[2-cyano-4-methyl-5-[[4-[[2-(methylamino)-6-[2,2,2-tris(fluoranyl)ethyl]thieno[2,3-d]pyrimidin-4-yl]amino]piperidin-1-yl]methyl]indol-1-yl]methyl]-1-bicyclo[1.1.1]pentanyl]methanamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LMY  "Create component"  2019-03-04  RCSB  
LMY  "Initial release"   2020-01-08  RCSB  
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