data_9YY
# 
_chem_comp.id                                    9YY 
_chem_comp.name                                  "4-(benzylamino)-6-[(2-oxo-2,3-dihydro-1H-indol-5-yl)amino]pyridine-3-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H19 N5 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-06-27 
_chem_comp.pdbx_modified_date                    2017-10-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        373.408 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9YY 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5W84 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9YY C13 C1  C 0 1 Y N N 7.701  42.730 11.520 5.073  -1.383 0.109  C13 9YY 1  
9YY C18 C2  C 0 1 Y N N 6.981  43.892 11.273 5.653  -1.707 -1.104 C18 9YY 2  
9YY C17 C3  C 0 1 Y N N 7.342  45.088 11.872 7.026  -1.829 -1.203 C17 9YY 3  
9YY C16 C4  C 0 1 Y N N 8.427  45.137 12.727 7.820  -1.625 -0.090 C16 9YY 4  
9YY C15 C5  C 0 1 Y N N 9.151  43.988 12.980 7.241  -1.300 1.122  C15 9YY 5  
9YY C19 C6  C 0 1 Y N N 11.524 42.839 8.002  -2.817 -0.633 0.369  C19 9YY 6  
9YY C20 C7  C 0 1 Y N N 11.367 43.502 9.224  -3.778 -1.475 -0.179 C20 9YY 7  
9YY C21 C8  C 0 1 Y N N 12.415 43.500 10.139 -5.100 -1.093 -0.186 C21 9YY 8  
9YY C22 C9  C 0 1 Y N N 13.605 42.842 9.837  -5.492 0.128  0.349  C22 9YY 9  
9YY C23 C10 C 0 1 Y N N 13.771 42.177 8.629  -4.525 0.969  0.897  C23 9YY 10 
9YY C24 C11 C 0 1 Y N N 12.724 42.180 7.716  -3.200 0.589  0.906  C24 9YY 11 
9YY C12 C12 C 0 1 N N N 7.322  41.417 10.881 3.576  -1.257 0.219  C12 9YY 12 
9YY C1  C13 C 0 1 Y N N 6.449  42.059 7.249  1.451  1.836  -0.153 C1  9YY 13 
9YY C2  C14 C 0 1 Y N N 7.135  42.418 6.093  0.092  2.151  -0.104 C2  9YY 14 
9YY N3  N1  N 0 1 Y N N 8.447  42.658 6.035  -0.811 1.210  0.069  N3  9YY 15 
9YY C4  C15 C 0 1 Y N N 9.148  42.547 7.165  -0.477 -0.069 0.205  C4  9YY 16 
9YY C5  C16 C 0 1 Y N N 8.573  42.182 8.391  0.852  -0.470 0.168  C5  9YY 17 
9YY C6  C17 C 0 1 Y N N 7.192  41.929 8.444  1.843  0.487  -0.013 C6  9YY 18 
9YY N7  N2  N 0 1 N N N 6.566  41.559 9.644  3.181  0.127  -0.055 N7  9YY 19 
9YY N8  N3  N 0 1 N N N 10.493 42.843 7.039  -1.471 -1.018 0.385  N8  9YY 20 
9YY C9  C18 C 0 1 N N N 4.971  41.842 7.211  2.457  2.891  -0.353 C9  9YY 21 
9YY N10 N4  N 0 1 N N N 4.466  41.144 6.195  2.083  4.186  -0.363 N10 9YY 22 
9YY O11 O1  O 0 1 N N N 4.258  42.314 8.111  3.626  2.595  -0.510 O11 9YY 23 
9YY C14 C19 C 0 1 Y N N 8.790  42.792 12.379 5.867  -1.180 1.222  C14 9YY 24 
9YY C25 C20 C 0 1 N N N 12.553 44.111 11.501 -6.358 -1.759 -0.693 C25 9YY 25 
9YY C26 C21 C 0 1 N N N 13.951 43.725 11.915 -7.456 -0.768 -0.372 C26 9YY 26 
9YY N27 N5  N 0 1 N N N 14.496 42.988 10.896 -6.875 0.287  0.225  N27 9YY 27 
9YY O28 O2  O 0 1 N N N 14.516 44.014 12.970 -8.638 -0.900 -0.609 O28 9YY 28 
9YY H1  H1  H 0 1 N N N 6.131  43.863 10.607 5.032  -1.866 -1.973 H1  9YY 29 
9YY H2  H2  H 0 1 N N N 6.774  45.984 11.670 7.479  -2.083 -2.150 H2  9YY 30 
9YY H3  H3  H 0 1 N N N 8.707  46.069 13.195 8.893  -1.720 -0.167 H3  9YY 31 
9YY H4  H4  H 0 1 N N N 10.000 44.021 13.647 7.861  -1.141 1.992  H4  9YY 32 
9YY H5  H5  H 0 1 N N N 10.442 44.010 9.455  -3.487 -2.427 -0.599 H5  9YY 33 
9YY H6  H6  H 0 1 N N N 14.696 41.667 8.404  -4.816 1.920  1.317  H6  9YY 34 
9YY H7  H7  H 0 1 N N N 12.838 41.667 6.773  -2.456 1.245  1.334  H7  9YY 35 
9YY H8  H8  H 0 1 N N N 6.711  40.847 11.597 3.101  -1.920 -0.505 H8  9YY 36 
9YY H9  H9  H 0 1 N N N 8.245  40.860 10.661 3.260  -1.532 1.225  H9  9YY 37 
9YY H10 H10 H 0 1 N N N 6.567  42.509 5.179  -0.222 3.179  -0.209 H10 9YY 38 
9YY H11 H11 H 0 1 N N N 9.181  42.097 9.279  1.112  -1.512 0.279  H11 9YY 39 
9YY H12 H12 H 0 1 N N N 5.863  42.248 9.820  3.855  0.791  -0.266 H12 9YY 40 
9YY H13 H13 H 0 1 N N N 10.781 43.101 6.117  -1.235 -1.948 0.522  H13 9YY 41 
9YY H14 H14 H 0 1 N N N 3.480  40.985 6.139  1.151  4.422  -0.238 H14 9YY 42 
9YY H15 H15 H 0 1 N N N 5.073  40.779 5.488  2.746  4.881  -0.495 H15 9YY 43 
9YY H16 H16 H 0 1 N N N 9.362  41.899 12.581 5.415  -0.927 2.169  H16 9YY 44 
9YY H17 H17 H 0 1 N N N 12.444 45.205 11.455 -6.296 -1.925 -1.769 H17 9YY 45 
9YY H18 H18 H 0 1 N N N 11.808 43.697 12.196 -6.529 -2.700 -0.170 H18 9YY 46 
9YY H19 H19 H 0 1 N N N 15.419 42.603 10.912 -7.359 1.068  0.534  H19 9YY 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9YY N3  C2  DOUB Y N 1  
9YY N3  C4  SING Y N 2  
9YY C2  C1  SING Y N 3  
9YY N10 C9  SING N N 4  
9YY N8  C4  SING N N 5  
9YY N8  C19 SING N N 6  
9YY C4  C5  DOUB Y N 7  
9YY C9  C1  SING N N 8  
9YY C9  O11 DOUB N N 9  
9YY C1  C6  DOUB Y N 10 
9YY C24 C19 DOUB Y N 11 
9YY C24 C23 SING Y N 12 
9YY C19 C20 SING Y N 13 
9YY C5  C6  SING Y N 14 
9YY C6  N7  SING N N 15 
9YY C23 C22 DOUB Y N 16 
9YY C20 C21 DOUB Y N 17 
9YY N7  C12 SING N N 18 
9YY C22 C21 SING Y N 19 
9YY C22 N27 SING N N 20 
9YY C21 C25 SING N N 21 
9YY C12 C13 SING N N 22 
9YY N27 C26 SING N N 23 
9YY C18 C13 DOUB Y N 24 
9YY C18 C17 SING Y N 25 
9YY C25 C26 SING N N 26 
9YY C13 C14 SING Y N 27 
9YY C17 C16 DOUB Y N 28 
9YY C26 O28 DOUB N N 29 
9YY C14 C15 DOUB Y N 30 
9YY C16 C15 SING Y N 31 
9YY C18 H1  SING N N 32 
9YY C17 H2  SING N N 33 
9YY C16 H3  SING N N 34 
9YY C15 H4  SING N N 35 
9YY C20 H5  SING N N 36 
9YY C23 H6  SING N N 37 
9YY C24 H7  SING N N 38 
9YY C12 H8  SING N N 39 
9YY C12 H9  SING N N 40 
9YY C2  H10 SING N N 41 
9YY C5  H11 SING N N 42 
9YY N7  H12 SING N N 43 
9YY N8  H13 SING N N 44 
9YY N10 H14 SING N N 45 
9YY N10 H15 SING N N 46 
9YY C14 H16 SING N N 47 
9YY C25 H17 SING N N 48 
9YY C25 H18 SING N N 49 
9YY N27 H19 SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9YY SMILES           ACDLabs              12.01 "c1(ccccc1)CNc2c(cnc(c2)Nc4cc3CC(=O)Nc3cc4)C(=O)N"                                                                                                                
9YY InChI            InChI                1.03  "InChI=1S/C21H19N5O2/c22-21(28)16-12-24-19(10-18(16)23-11-13-4-2-1-3-5-13)25-15-6-7-17-14(8-15)9-20(27)26-17/h1-8,10,12H,9,11H2,(H2,22,28)(H,26,27)(H2,23,24,25)" 
9YY InChIKey         InChI                1.03  MSYMSSQHTUWZDQ-UHFFFAOYSA-N                                                                                                                                       
9YY SMILES_CANONICAL CACTVS               3.385 "NC(=O)c1cnc(Nc2ccc3NC(=O)Cc3c2)cc1NCc4ccccc4"                                                                                                                    
9YY SMILES           CACTVS               3.385 "NC(=O)c1cnc(Nc2ccc3NC(=O)Cc3c2)cc1NCc4ccccc4"                                                                                                                    
9YY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)CNc2cc(ncc2C(=O)N)Nc3ccc4c(c3)CC(=O)N4"                                                                                                                
9YY SMILES           "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)CNc2cc(ncc2C(=O)N)Nc3ccc4c(c3)CC(=O)N4"                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9YY "SYSTEMATIC NAME" ACDLabs              12.01 "4-(benzylamino)-6-[(2-oxo-2,3-dihydro-1H-indol-5-yl)amino]pyridine-3-carboxamide"               
9YY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "6-[(2-oxidanylidene-1,3-dihydroindol-5-yl)amino]-4-[(phenylmethyl)amino]pyridine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9YY "Create component" 2017-06-27 RCSB 
9YY "Initial release"  2017-10-11 RCSB 
# 
