data_EXX
#

_chem_comp.id                                   EXX
_chem_comp.name                                 "4,5,6,7-tetrabromo-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-1H-benzimidazole"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C12 H10 Br4 N2 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        Tetrabromo-Deoxyribofuranosyl-Benzimidazole
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2013-05-30
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       549.835
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    EXX
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4KWP
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
EXX  BRE  BRE  BR  0  0  N  N  N  22.953  -32.045  15.425   2.804   2.935   0.137  BRAE  EXX   1  
EXX  CAN  CAN  C   0  1  Y  N  N  22.859  -30.664  14.099   1.633   1.453   0.036  CAN   EXX   2  
EXX  CAL  CAL  C   0  1  Y  N  N  22.995  -30.984  12.764   2.141   0.174  -0.012  CAL   EXX   3  
EXX  BRC  BRC  BR  0  0  N  N  N  23.325  -32.817  12.140   4.012  -0.095   0.017  BRAC  EXX   4  
EXX  CAM  CAM  C   0  1  Y  N  N  22.926  -29.968  11.871   1.288  -0.921  -0.080  CAM   EXX   5  
EXX  BRD  BRD  BR  0  0  N  N  N  23.163  -30.430  10.003   2.006  -2.669  -0.143  BRAD  EXX   6  
EXX  CAO  CAO  C   0  1  Y  N  N  22.719  -28.651  12.277  -0.080  -0.740  -0.101  CAO   EXX   7  
EXX  BRF  BRF  BR  0  0  N  N  N  22.619  -27.302  10.900  -1.232  -2.237  -0.192  BRAF  EXX   8  
EXX  CAQ  CAQ  C   0  1  Y  N  N  22.580  -28.333  13.656  -0.609   0.543  -0.054  CAQ   EXX   9  
EXX  CAP  CAP  C   0  1  Y  N  N  22.662  -29.358  14.540   0.249   1.653   0.015  CAP   EXX  10  
EXX  NAJ  NAJ  N   0  1  Y  N  N  22.521  -28.868  15.793  -0.537   2.760   0.052  NAJ   EXX  11  
EXX  CAG  CAG  C   0  1  Y  N  N  22.339  -27.530  15.700  -1.789   2.409   0.006  CAG   EXX  12  
EXX  NAU  NAU  N   0  1  Y  N  N  22.399  -27.177  14.390  -1.892   1.054  -0.058  NAU   EXX  13  
EXX  CAT  CAT  C   0  1  N  N  R  22.217  -25.973  13.970  -3.134   0.279  -0.120  CAT   EXX  14  
EXX  OAK  OAK  O   0  1  N  N  N  23.155  -25.000  14.503  -4.207   1.091  -0.647  OAK   EXX  15  
EXX  CAI  CAI  C   0  1  N  N  N  20.755  -25.521  14.562  -3.596  -0.110   1.302  CAI   EXX  16  
EXX  CAR  CAR  C   0  1  N  N  S  21.006  -24.157  14.893  -5.136   0.000   1.240  CAR   EXX  17  
EXX  OAB  OAB  O   0  1  N  N  N  20.637  -23.288  13.798  -5.740  -1.268   1.505  OAB   EXX  18  
EXX  CAS  CAS  C   0  1  N  N  R  22.360  -24.073  15.209  -5.423   0.444  -0.212  CAS   EXX  19  
EXX  CAH  CAH  C   0  1  N  N  N  22.659  -24.054  16.798  -6.592   1.429  -0.248  CAH   EXX  20  
EXX  OAA  OAA  O   0  1  N  N  N  22.038  -25.112  17.443  -6.868   1.793  -1.602  OAA   EXX  21  
EXX  H1   H1   H   0  1  N  N  N  22.174  -26.857  16.528  -2.624   3.093   0.022  H1    EXX  22  
EXX  H2   H2   H   0  1  N  N  N  22.174  -25.901  12.873  -2.996  -0.611  -0.733  H2    EXX  23  
EXX  H3   H3   H   0  1  N  N  N  19.965  -25.614  13.802  -3.296  -1.132   1.535  H3    EXX  24  
EXX  H4   H4   H   0  1  N  N  N  20.480  -26.108  15.450  -3.193   0.585   2.039  H4    EXX  25  
EXX  H5   H5   H   0  1  N  N  N  20.407  -23.887  15.775  -5.495   0.750   1.945  H5    EXX  26  
EXX  H6   H6   H   0  1  N  N  N  20.811  -22.385  14.037  -5.543  -1.622   2.382  H6    EXX  27  
EXX  H7   H7   H   0  1  N  N  N  22.688  -23.079  14.870  -5.636  -0.423  -0.838  H7    EXX  28  
EXX  H8   H8   H   0  1  N  N  N  23.745  -24.125  16.959  -7.475   0.961   0.190  H8    EXX  29  
EXX  H9   H9   H   0  1  N  N  N  22.287  -23.109  17.221  -6.333   2.321   0.323  H9    EXX  30  
EXX  H10  H10  H   0  1  N  N  N  22.231  -25.074  18.372  -7.600   2.417  -1.700  H10   EXX  31  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
EXX  BRD  CAM  SING  N  N   1  
EXX  BRF  CAO  SING  N  N   2  
EXX  CAM  CAO  DOUB  Y  N   3  
EXX  CAM  CAL  SING  Y  N   4  
EXX  BRC  CAL  SING  N  N   5  
EXX  CAO  CAQ  SING  Y  N   6  
EXX  CAL  CAN  DOUB  Y  N   7  
EXX  CAQ  NAU  SING  Y  N   8  
EXX  CAQ  CAP  DOUB  Y  N   9  
EXX  OAB  CAR  SING  N  N  10  
EXX  CAT  NAU  SING  N  N  11  
EXX  CAT  OAK  SING  N  N  12  
EXX  CAT  CAI  SING  N  N  13  
EXX  CAN  CAP  SING  Y  N  14  
EXX  CAN  BRE  SING  N  N  15  
EXX  NAU  CAG  SING  Y  N  16  
EXX  OAK  CAS  SING  N  N  17  
EXX  CAP  NAJ  SING  Y  N  18  
EXX  CAI  CAR  SING  N  N  19  
EXX  CAR  CAS  SING  N  N  20  
EXX  CAS  CAH  SING  N  N  21  
EXX  CAG  NAJ  DOUB  Y  N  22  
EXX  CAH  OAA  SING  N  N  23  
EXX  CAG  H1   SING  N  N  24  
EXX  CAT  H2   SING  N  N  25  
EXX  CAI  H3   SING  N  N  26  
EXX  CAI  H4   SING  N  N  27  
EXX  CAR  H5   SING  N  N  28  
EXX  OAB  H6   SING  N  N  29  
EXX  CAS  H7   SING  N  N  30  
EXX  CAH  H8   SING  N  N  31  
EXX  CAH  H9   SING  N  N  32  
EXX  OAA  H10  SING  N  N  33  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
EXX  SMILES            ACDLabs               12.01  "Brc3c1c(ncn1C2OC(C(O)C2)CO)c(Br)c(Br)c3Br"  
EXX  InChI             InChI                 1.03   "InChI=1S/C12H10Br4N2O3/c13-7-8(14)10(16)12-11(9(7)15)17-3-18(12)6-1-4(20)5(2-19)21-6/h3-6,19-20H,1-2H2/t4-,5+,6+/m0/s1"  
EXX  InChIKey          InChI                 1.03   VQNVMWNZONLRRO-KVQBGUIXSA-N  
EXX  SMILES_CANONICAL  CACTVS                3.370  "OC[C@H]1O[C@H](C[C@@H]1O)n2cnc3c(Br)c(Br)c(Br)c(Br)c23"  
EXX  SMILES            CACTVS                3.370  "OC[CH]1O[CH](C[CH]1O)n2cnc3c(Br)c(Br)c(Br)c(Br)c23"  
EXX  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)CO)O)c(c(c(c2Br)Br)Br)Br"  
EXX  SMILES            "OpenEye OEToolkits"  1.7.6  "c1nc2c(n1C3CC(C(O3)CO)O)c(c(c(c2Br)Br)Br)Br"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
EXX  "SYSTEMATIC NAME"  ACDLabs               12.01  "4,5,6,7-tetrabromo-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-1H-benzimidazole"  
EXX  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R,3S,5R)-2-(hydroxymethyl)-5-[4,5,6,7-tetrakis(bromanyl)benzimidazol-1-yl]oxolan-3-ol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
EXX  "Create component"  2013-05-30  RCSB  
EXX  "Initial release"   2014-04-09  RCSB  
EXX  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     EXX
_pdbx_chem_comp_synonyms.name        Tetrabromo-Deoxyribofuranosyl-Benzimidazole
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
