data_K2W
#

_chem_comp.id                                   K2W
_chem_comp.name                                 "(2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[[4-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]but-3-ynylamino]methyl]oxolane-3,4-diol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H29 N11 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-04-16
_chem_comp.pdbx_modified_date                   2020-02-14
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       583.557
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    K2W
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6RGD
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
K2W  C2   C1   C  0  1  N  N  S  15.391   9.944   8.227   -4.614   2.598  -1.638  C2   K2W   1  
K2W  C3   C2   C  0  1  N  N  R  15.229   9.471   9.629   -3.647   1.400  -1.707  C3   K2W   2  
K2W  C4   C3   C  0  1  N  N  R  16.862   8.171   8.828   -5.614   0.566  -0.814  C4   K2W   3  
K2W  C5   C4   C  0  1  Y  N  N  16.034   6.241   7.472   -5.519  -0.387   1.520  C5   K2W   4  
K2W  C6   C5   C  0  1  Y  N  N  17.761   4.977   7.553   -7.560  -1.061   1.807  C6   K2W   5  
K2W  C7   C6   C  0  1  Y  N  N  18.678   4.030   7.452   -8.798  -1.572   2.233  C7   K2W   6  
K2W  N8   N1   N  0  1  Y  N  N  22.825  12.804  11.903    8.477   2.642   1.832  N8   K2W   7  
K2W  N9   N2   N  0  1  Y  N  N  22.157  10.839  12.954    8.128   0.535   0.945  N9   K2W   8  
K2W  C10  C7   C  0  1  N  N  N  13.749   9.371   9.980   -2.265   1.818  -1.200  C10  K2W   9  
K2W  C11  C8   C  0  1  N  N  N  14.374   9.293  12.338    0.020   1.072  -0.904  C11  K2W  10  
K2W  C12  C9   C  0  1  N  N  N  14.833  10.410  13.270    0.973  -0.106  -1.108  C12  K2W  11  
K2W  C14  C10  C  0  1  N  N  N  17.407  10.992  12.921    3.387   0.552  -0.248  C14  K2W  12  
K2W  C16  C11  C  0  1  Y  N  N  20.535  12.307  12.193    6.332   2.058   1.067  C16  K2W  13  
K2W  C18  C12  C  0  1  Y  N  N  23.156  11.684  12.498    8.912   1.443   1.488  C18  K2W  14  
K2W  C19  C13  C  0  1  Y  N  N  20.874  11.170  12.790    6.845   0.795   0.719  C19  K2W  15  
K2W  C20  C14  C  0  1  N  N  R  19.788   9.259  13.822    5.842  -1.284  -0.322  C20  K2W  16  
K2W  C21  C15  C  0  1  N  N  R  18.640   9.144  14.764    5.172  -2.260   0.678  C21  K2W  17  
K2W  C1   C16  C  0  1  N  N  R  16.682   9.278   7.823   -5.761   2.106  -0.721  C1   K2W  18  
K2W  C13  C17  C  0  1  N  N  N  16.258  10.730  13.073    2.316   0.260  -0.630  C13  K2W  19  
K2W  C15  C18  C  0  1  Y  N  N  18.755  11.294  12.746    4.694   0.908   0.217  C15  K2W  20  
K2W  C17  C19  C  0  1  Y  N  N  21.484  13.119  11.752    7.210   2.994   1.644  C17  K2W  21  
K2W  C22  C20  C  0  1  N  N  S  18.671   7.679  14.984    4.755  -3.432  -0.242  C22  K2W  22  
K2W  C23  C21  C  0  1  N  N  R  18.869   7.162  13.581    4.720  -2.812  -1.652  C23  K2W  23  
K2W  C24  C22  C  0  1  N  N  N  17.518   7.001  12.892    3.324  -2.974  -2.258  C24  K2W  24  
K2W  C8   C23  C  0  1  Y  N  N  20.183   5.260   8.729   -9.712  -0.954   0.206  C8   K2W  25  
K2W  C9   C24  C  0  1  Y  N  N  18.030   6.080   8.236   -7.483  -0.494   0.523  C9   K2W  26  
K2W  N1   N3   N  0  1  Y  N  N  16.965   6.861   8.183   -6.183  -0.082   0.369  N1   K2W  27  
K2W  N10  N4   N  0  1  Y  N  N  19.766  10.541  13.135    5.795   0.089   0.186  N10  K2W  28  
K2W  N11  N5   N  0  1  N  N  N  21.085  14.234  11.163    6.764   4.252   2.008  N11  K2W  29  
K2W  N2   N6   N  0  1  Y  N  N  16.527   5.076   7.081   -6.329  -0.961   2.362  N2   K2W  30  
K2W  N3   N7   N  0  1  N  N  N  18.351   2.952   6.756   -8.935  -2.142   3.486  N3   K2W  31  
K2W  N4   N8   N  0  1  Y  N  N  19.919   4.169   8.053   -9.834  -1.495   1.404  N4   K2W  32  
K2W  N5   N9   N  0  1  Y  N  N  19.214   6.246   8.827   -8.574  -0.461  -0.235  N5   K2W  33  
K2W  N6   N10  N  0  1  N  N  N  13.454   9.843  11.337   -1.321   0.707  -1.381  N6   K2W  34  
K2W  N7   N11  N  0  1  Y  N  N  19.212  12.386  12.165    5.021   2.067   0.739  N7   K2W  35  
K2W  O1   O1   O  0  1  N  N  N  17.739  10.197   7.990   -7.031   2.529  -1.222  O1   K2W  36  
K2W  O2   O2   O  0  1  N  N  N  15.656   8.134   9.553   -4.185   0.367  -0.866  O2   K2W  37  
K2W  O3   O3   O  0  1  N  N  N  18.968   9.809  15.983    6.105  -2.696   1.669  O3   K2W  38  
K2W  O4   O4   O  0  1  N  N  N  19.824   7.368  15.755    5.721  -4.484  -0.182  O4   K2W  39  
K2W  O5   O5   O  0  1  N  N  N  16.568   6.460  13.802    3.332  -2.501  -3.606  O5   K2W  40  
K2W  O6   O6   O  0  1  N  N  N  19.573   8.201  12.887    5.037  -1.417  -1.513  O6   K2W  41  
K2W  O7   O7   O  0  1  N  N  N  15.558  11.360   8.227   -5.112   2.915  -2.939  O7   K2W  42  
K2W  H1   H1   H  0  1  N  N  N  14.556   9.617   7.590   -4.119   3.464  -1.198  H1   K2W  43  
K2W  H2   H2   H  0  1  N  N  N  15.788  10.083  10.352   -3.572   1.043  -2.734  H2   K2W  44  
K2W  H3   H3   H  0  1  N  N  N  17.730   8.369   9.474   -6.087   0.190  -1.722  H3   K2W  45  
K2W  H4   H4   H  0  1  N  N  N  15.047   6.619   7.251   -4.474  -0.185   1.704  H4   K2W  46  
K2W  H5   H5   H  0  1  N  N  N  13.176   9.979   9.264   -1.918   2.685  -1.762  H5   K2W  47  
K2W  H6   H6   H  0  1  N  N  N  13.439   8.319   9.899   -2.328   2.072  -0.142  H6   K2W  48  
K2W  H7   H7   H  0  1  N  N  N  13.859   8.516  12.922   -0.028   1.322   0.157  H7   K2W  49  
K2W  H8   H8   H  0  1  N  N  N  15.247   8.854  11.833    0.382   1.934  -1.464  H8   K2W  50  
K2W  H9   H9   H  0  1  N  N  N  14.234  11.311  13.070    0.610  -0.969  -0.548  H9   K2W  51  
K2W  H10  H10  H  0  1  N  N  N  14.679  10.091  14.312    1.020  -0.356  -2.168  H10  K2W  52  
K2W  H11  H11  H  0  1  N  N  N  24.195  11.423  12.631    9.950   1.198   1.658  H11  K2W  53  
K2W  H12  H12  H  0  1  N  N  N  20.737   9.124  14.362    6.872  -1.584  -0.519  H12  K2W  54  
K2W  H13  H13  H  0  1  N  N  N  17.694   9.485  14.318    4.299  -1.801   1.143  H13  K2W  55  
K2W  H14  H14  H  0  1  N  N  N  16.621   8.881   6.799   -5.615   2.450   0.303  H14  K2W  56  
K2W  H15  H15  H  0  1  N  N  N  17.737   7.305  15.430    3.769  -3.805   0.037  H15  K2W  57  
K2W  H16  H16  H  0  1  N  N  N  19.424   6.212  13.583    5.459  -3.298  -2.289  H16  K2W  58  
K2W  H17  H17  H  0  1  N  N  N  17.168   7.984  12.542    3.042  -4.027  -2.243  H17  K2W  59  
K2W  H18  H18  H  0  1  N  N  N  17.626   6.323  12.033    2.606  -2.397  -1.675  H18  K2W  60  
K2W  H19  H19  H  0  1  N  N  N  21.144   5.389   9.204  -10.580  -0.912  -0.436  H19  K2W  61  
K2W  H20  H20  H  0  1  N  N  N  21.883  14.762  10.872    7.378   4.889   2.405  H20  K2W  62  
K2W  H21  H21  H  0  1  N  N  N  20.526  14.008  10.365    5.836   4.498   1.866  H21  K2W  63  
K2W  H22  H22  H  0  1  N  N  N  19.119   2.311   6.753   -8.171  -2.192   4.082  H22  K2W  64  
K2W  H23  H23  H  0  1  N  N  N  17.554   2.515   7.173   -9.794  -2.492   3.769  H23  K2W  65  
K2W  H24  H24  H  0  1  N  N  N  13.524  10.840  11.351   -1.653  -0.128  -0.923  H24  K2W  66  
K2W  H26  H26  H  0  1  N  N  N  18.558   9.787   7.738   -7.136   3.489  -1.268  H26  K2W  67  
K2W  H27  H27  H  0  1  N  N  N  18.239   9.739  16.588    5.732  -3.308   2.318  H27  K2W  68  
K2W  H28  H28  H  0  1  N  N  N  19.709   7.690  16.641    5.510  -5.245  -0.740  H28  K2W  69  
K2W  H29  H29  H  0  1  N  N  N  15.730   6.363  13.365    2.478  -2.574  -4.054  H29  K2W  70  
K2W  H30  H30  H  0  1  N  N  N  14.743  11.775   8.482   -5.726   3.662  -2.954  H30  K2W  71  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
K2W  N3   C7   SING  N  N   1  
K2W  N2   C5   DOUB  Y  N   2  
K2W  N2   C6   SING  Y  N   3  
K2W  C7   C6   DOUB  Y  N   4  
K2W  C7   N4   SING  Y  N   5  
K2W  C5   N1   SING  Y  N   6  
K2W  C6   C9   SING  Y  N   7  
K2W  C1   O1   SING  N  N   8  
K2W  C1   C2   SING  N  N   9  
K2W  C1   C4   SING  N  N  10  
K2W  N4   C8   DOUB  Y  N  11  
K2W  N1   C9   SING  Y  N  12  
K2W  N1   C4   SING  N  N  13  
K2W  O7   C2   SING  N  N  14  
K2W  C2   C3   SING  N  N  15  
K2W  C9   N5   DOUB  Y  N  16  
K2W  C8   N5   SING  Y  N  17  
K2W  C4   O2   SING  N  N  18  
K2W  O2   C3   SING  N  N  19  
K2W  C3   C10  SING  N  N  20  
K2W  C10  N6   SING  N  N  21  
K2W  N11  C17  SING  N  N  22  
K2W  N6   C11  SING  N  N  23  
K2W  C17  N8   DOUB  Y  N  24  
K2W  C17  C16  SING  Y  N  25  
K2W  N8   C18  SING  Y  N  26  
K2W  N7   C16  SING  Y  N  27  
K2W  N7   C15  DOUB  Y  N  28  
K2W  C16  C19  DOUB  Y  N  29  
K2W  C11  C12  SING  N  N  30  
K2W  C18  N9   DOUB  Y  N  31  
K2W  C15  C14  SING  N  N  32  
K2W  C15  N10  SING  Y  N  33  
K2W  C19  N9   SING  Y  N  34  
K2W  C19  N10  SING  Y  N  35  
K2W  O6   C23  SING  N  N  36  
K2W  O6   C20  SING  N  N  37  
K2W  C24  C23  SING  N  N  38  
K2W  C24  O5   SING  N  N  39  
K2W  C14  C13  TRIP  N  N  40  
K2W  C13  C12  SING  N  N  41  
K2W  N10  C20  SING  N  N  42  
K2W  C23  C22  SING  N  N  43  
K2W  C20  C21  SING  N  N  44  
K2W  C21  C22  SING  N  N  45  
K2W  C21  O3   SING  N  N  46  
K2W  C22  O4   SING  N  N  47  
K2W  C2   H1   SING  N  N  48  
K2W  C3   H2   SING  N  N  49  
K2W  C4   H3   SING  N  N  50  
K2W  C5   H4   SING  N  N  51  
K2W  C10  H5   SING  N  N  52  
K2W  C10  H6   SING  N  N  53  
K2W  C11  H7   SING  N  N  54  
K2W  C11  H8   SING  N  N  55  
K2W  C12  H9   SING  N  N  56  
K2W  C12  H10  SING  N  N  57  
K2W  C18  H11  SING  N  N  58  
K2W  C20  H12  SING  N  N  59  
K2W  C21  H13  SING  N  N  60  
K2W  C1   H14  SING  N  N  61  
K2W  C22  H15  SING  N  N  62  
K2W  C23  H16  SING  N  N  63  
K2W  C24  H17  SING  N  N  64  
K2W  C24  H18  SING  N  N  65  
K2W  C8   H19  SING  N  N  66  
K2W  N11  H20  SING  N  N  67  
K2W  N11  H21  SING  N  N  68  
K2W  N3   H22  SING  N  N  69  
K2W  N3   H23  SING  N  N  70  
K2W  N6   H24  SING  N  N  71  
K2W  O1   H26  SING  N  N  72  
K2W  O3   H27  SING  N  N  73  
K2W  O4   H28  SING  N  N  74  
K2W  O5   H29  SING  N  N  75  
K2W  O7   H30  SING  N  N  76  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
K2W  InChI             InChI                 1.03   "InChI=1S/C24H29N11O7/c25-19-13-21(30-7-28-19)34(9-32-13)23-17(39)15(37)10(41-23)5-27-4-2-1-3-12-33-14-20(26)29-8-31-22(14)35(12)24-18(40)16(38)11(6-36)42-24/h7-11,15-18,23-24,27,36-40H,2,4-6H2,(H2,25,28,30)(H2,26,29,31)/t10-,11-,15-,16-,17-,18-,23-,24-/m1/s1"  
K2W  InChIKey          InChI                 1.03   HUYGUSYCJOKUJB-KRSQEUQLSA-N  
K2W  SMILES_CANONICAL  CACTVS                3.385  "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CNCCC#Cc4nc5c(N)ncnc5n4[C@@H]6O[C@H](CO)[C@@H](O)[C@H]6O)[C@@H](O)[C@H]3O"  
K2W  SMILES            CACTVS                3.385  "Nc1ncnc2n(cnc12)[CH]3O[CH](CNCCC#Cc4nc5c(N)ncnc5n4[CH]6O[CH](CO)[CH](O)[CH]6O)[CH](O)[CH]3O"  
K2W  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CNCCC#Cc4nc5c(ncnc5n4[C@H]6[C@@H]([C@@H]([C@H](O6)CO)O)O)N)O)O)N"  
K2W  SMILES            "OpenEye OEToolkits"  2.0.7  "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CNCCC#Cc4nc5c(ncnc5n4C6C(C(C(O6)CO)O)O)N)O)O)N"  
#
_pdbx_chem_comp_identifier.comp_id          K2W
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[[4-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]but-3-ynylamino]methyl]oxolane-3,4-diol"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
K2W  "Create component"  2019-04-16  RCSB  
K2W  "Initial release"   2020-02-19  RCSB  
##
