data_4DW
#

_chem_comp.id                                   4DW
_chem_comp.name                                 "N-{4-[2-(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)ethyl]benzoyl}-L-glutamic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H19 N5 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        pemetrexed
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-03-05
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       425.395
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    4DW
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4ZZ3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4DW  C1   C1   C  0  1  Y  N  N  62.197  48.207  18.685   0.971   0.369   0.381  C1   4DW   1  
4DW  C2   C2   C  0  1  Y  N  N  61.011  48.911  18.852   0.681  -0.873   0.917  C2   4DW   2  
4DW  C3   C3   C  0  1  Y  N  N  59.867  48.533  18.159  -0.617  -1.339   0.923  C3   4DW   3  
4DW  C4   C4   C  0  1  Y  N  N  59.937  47.444  17.300  -1.639  -0.555   0.386  C4   4DW   4  
4DW  C5   C5   C  0  1  Y  N  N  61.117  46.732  17.124  -1.340   0.697  -0.154  C5   4DW   5  
4DW  C6   C6   C  0  1  Y  N  N  62.257  47.119  17.821  -0.038   1.153  -0.149  C6   4DW   6  
4DW  C7   C7   C  0  1  N  N  N  63.407  48.670  19.468   2.392   0.872   0.378  C7   4DW   7  
4DW  C8   C8   C  0  1  N  N  N  63.408  48.563  20.979   3.086   0.434  -0.913  C8   4DW   8  
4DW  C9   C9   C  0  1  Y  N  N  62.313  47.679  21.540   4.506   0.937  -0.916  C9   4DW   9  
4DW  C10  C10  C  0  1  Y  N  N  62.141  46.327  21.280   4.956   2.074  -1.475  C10  4DW  10  
4DW  N11  N1   N  0  1  Y  N  N  61.062  45.918  21.963   6.307   2.181  -1.265  N11  4DW  11  
4DW  C12  C11  C  0  1  Y  N  N  60.540  46.945  22.648   6.757   1.110  -0.564  C12  4DW  12  
4DW  C13  C12  C  0  1  Y  N  N  61.302  48.075  22.406   5.663   0.288  -0.306  C13  4DW  13  
4DW  C14  C13  C  0  1  N  N  N  60.945  49.267  23.019   5.877  -0.946   0.451  C14  4DW  14  
4DW  O15  O1   O  0  1  N  N  N  61.594  50.283  22.829   4.947  -1.697   0.697  O15  4DW  15  
4DW  N16  N2   N  0  1  N  N  N  59.875  49.302  23.825   7.121  -1.233   0.870  N16  4DW  16  
4DW  C17  C14  C  0  1  N  N  N  59.152  48.192  24.043   8.130  -0.429   0.610  C17  4DW  17  
4DW  N18  N3   N  0  1  N  N  N  59.480  47.027  23.462   7.990   0.723  -0.095  N18  4DW  18  
4DW  N19  N4   N  0  1  N  N  N  58.021  48.233  24.898   9.375  -0.774   1.062  N19  4DW  19  
4DW  C20  C15  C  0  1  N  N  N  58.653  47.050  16.549  -3.033  -1.048   0.388  C20  4DW  20  
4DW  O21  O2   O  0  1  N  N  N  57.669  47.754  16.649  -3.291  -2.139   0.859  O21  4DW  21  
4DW  N22  N5   N  0  1  N  N  N  58.662  45.870  15.762  -4.018  -0.288  -0.131  N22  4DW  22  
4DW  C23  C16  C  0  1  N  N  S  57.470  45.512  15.080  -5.399  -0.777  -0.129  C23  4DW  23  
4DW  C24  C17  C  0  1  N  N  N  57.744  44.900  13.722  -6.346   0.394  -0.165  C24  4DW  24  
4DW  C25  C18  C  0  1  N  N  N  59.023  44.109  13.568  -7.151   0.631   0.868  C25  4DW  25  
4DW  C26  C19  C  0  1  N  N  N  59.136  43.158  12.396  -8.075   1.774   0.833  C26  4DW  26  
4DW  O27  O3   O  0  1  N  N  N  58.200  43.085  11.558  -8.104   2.502  -0.140  O27  4DW  27  
4DW  O28  O4   O  0  1  N  N  N  60.164  42.443  12.264  -8.890   2.014   1.880  O28  4DW  28  
4DW  C29  C20  C  0  1  N  N  N  56.781  44.482  15.950  -5.627  -1.645  -1.340  C29  4DW  29  
4DW  O30  O5   O  0  1  N  N  N  56.246  44.872  17.022  -6.828  -2.206  -1.547  O30  4DW  30  
4DW  O31  O6   O  0  1  N  N  N  56.748  43.271  15.607  -4.727  -1.835  -2.124  O31  4DW  31  
4DW  H1   H1   H  0  1  N  N  N  60.978  49.756  19.524   1.473  -1.479   1.332  H1   4DW  32  
4DW  H2   H2   H  0  1  N  N  N  58.942  49.076  18.286  -0.842  -2.309   1.342  H2   4DW  33  
4DW  H3   H3   H  0  1  N  N  N  61.149  45.887  16.453  -2.126   1.309  -0.571  H3   4DW  34  
4DW  H4   H4   H  0  1  N  N  N  63.183  46.578  17.692   0.195   2.122  -0.566  H4   4DW  35  
4DW  H5   H5   H  0  1  N  N  N  64.265  48.084  19.106   2.392   1.960   0.440  H5   4DW  36  
4DW  H6   H6   H  0  1  N  N  N  63.559  49.732  19.223   2.925   0.458   1.235  H6   4DW  37  
4DW  H7   H7   H  0  1  N  N  N  64.378  48.153  21.295   3.085  -0.654  -0.975  H7   4DW  38  
4DW  H8   H8   H  0  1  N  N  N  63.284  49.573  21.396   2.553   0.847  -1.770  H8   4DW  39  
4DW  H9   H9   H  0  1  N  N  N  62.763  45.715  20.643   4.348   2.791  -2.007  H9   4DW  40  
4DW  H10  H10  H  0  1  N  N  N  60.701  44.986  21.962   6.861   2.915  -1.574  H10  4DW  41  
4DW  H11  H11  H  0  1  N  N  N  58.927  46.213  23.639   8.764   1.283  -0.260  H11  4DW  42  
4DW  H12  H12  H  0  1  N  N  N  57.760  49.091  25.341   9.500  -1.595   1.562  H12  4DW  43  
4DW  H13  H13  H  0  1  N  N  N  57.485  47.404  25.058  10.134  -0.196   0.882  H13  4DW  44  
4DW  H14  H14  H  0  1  N  N  N  59.485  45.306  15.690  -3.812   0.582  -0.507  H14  4DW  45  
4DW  H15  H15  H  0  1  N  N  N  56.813  46.386  14.960  -5.576  -1.360   0.775  H15  4DW  46  
4DW  H16  H16  H  0  1  N  N  N  57.055  45.023  12.899  -6.372   1.041  -1.029  H16  4DW  47  
4DW  H17  H17  H  0  1  N  N  N  59.833  44.219  14.274  -7.125  -0.016   1.733  H17  4DW  48  
4DW  H18  H18  H  0  1  N  N  N  60.079  41.906  11.485  -9.480   2.777   1.811  H18  4DW  49  
4DW  H19  H19  H  0  1  N  N  N  55.853  44.131  17.468  -6.926  -2.754  -2.337  H19  4DW  50  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4DW  O27  C26  DOUB  N  N   1  
4DW  O28  C26  SING  N  N   2  
4DW  C26  C25  SING  N  N   3  
4DW  C25  C24  DOUB  N  E   4  
4DW  C24  C23  SING  N  N   5  
4DW  C23  N22  SING  N  N   6  
4DW  C23  C29  SING  N  N   7  
4DW  O31  C29  DOUB  N  N   8  
4DW  N22  C20  SING  N  N   9  
4DW  C29  O30  SING  N  N  10  
4DW  C20  O21  DOUB  N  N  11  
4DW  C20  C4   SING  N  N  12  
4DW  C5   C4   DOUB  Y  N  13  
4DW  C5   C6   SING  Y  N  14  
4DW  C4   C3   SING  Y  N  15  
4DW  C6   C1   DOUB  Y  N  16  
4DW  C3   C2   DOUB  Y  N  17  
4DW  C1   C2   SING  Y  N  18  
4DW  C1   C7   SING  N  N  19  
4DW  C7   C8   SING  N  N  20  
4DW  C8   C9   SING  N  N  21  
4DW  C10  C9   DOUB  Y  N  22  
4DW  C10  N11  SING  Y  N  23  
4DW  C9   C13  SING  Y  N  24  
4DW  N11  C12  SING  Y  N  25  
4DW  C13  C12  DOUB  Y  N  26  
4DW  C13  C14  SING  N  N  27  
4DW  C12  N18  SING  N  N  28  
4DW  O15  C14  DOUB  N  N  29  
4DW  C14  N16  SING  N  N  30  
4DW  N18  C17  SING  N  N  31  
4DW  N16  C17  DOUB  N  N  32  
4DW  C17  N19  SING  N  N  33  
4DW  C2   H1   SING  N  N  34  
4DW  C3   H2   SING  N  N  35  
4DW  C5   H3   SING  N  N  36  
4DW  C6   H4   SING  N  N  37  
4DW  C7   H5   SING  N  N  38  
4DW  C7   H6   SING  N  N  39  
4DW  C8   H7   SING  N  N  40  
4DW  C8   H8   SING  N  N  41  
4DW  C10  H9   SING  N  N  42  
4DW  N11  H10  SING  N  N  43  
4DW  N18  H11  SING  N  N  44  
4DW  N19  H12  SING  N  N  45  
4DW  N19  H13  SING  N  N  46  
4DW  N22  H14  SING  N  N  47  
4DW  C23  H15  SING  N  N  48  
4DW  C24  H16  SING  N  N  49  
4DW  C25  H17  SING  N  N  50  
4DW  O28  H18  SING  N  N  51  
4DW  O30  H19  SING  N  N  52  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4DW  SMILES            ACDLabs               12.01  "c1(ccc(cc1)C(=O)NC(C(O)=O)[C@H]=[C@H]C(=O)O)CCc2c3c(nc2)NC(=NC3=O)N"  
4DW  InChI             InChI                 1.03   "InChI=1S/C20H19N5O6/c21-20-24-16-15(18(29)25-20)12(9-22-16)6-3-10-1-4-11(5-2-10)17(28)23-13(19(30)31)7-8-14(26)27/h1-2,4-5,7-9,13H,3,6H2,(H,23,28)(H,26,27)(H,30,31)(H4,21,22,24,25,29)/b8-7+/t13-/m0/s1"  
4DW  InChIKey          InChI                 1.03   OOPGILDDKAKTLT-GWJCSSMESA-N  
4DW  SMILES_CANONICAL  CACTVS                3.385  "NC1=NC(=O)c2c(CCc3ccc(cc3)C(=O)N[C@@H](/C=C/C(O)=O)C(O)=O)c[nH]c2N1"  
4DW  SMILES            CACTVS                3.385  "NC1=NC(=O)c2c(CCc3ccc(cc3)C(=O)N[CH](C=CC(O)=O)C(O)=O)c[nH]c2N1"  
4DW  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "c1cc(ccc1CCc2c[nH]c3c2C(=O)N=C(N3)N)C(=O)N[C@@H](/C=C/C(=O)O)C(=O)O"  
4DW  SMILES            "OpenEye OEToolkits"  1.9.2  "c1cc(ccc1CCc2c[nH]c3c2C(=O)N=C(N3)N)C(=O)NC(C=CC(=O)O)C(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
4DW  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2E,4S)-4-({4-[2-(2-amino-4-oxo-4,7-dihydro-1H-pyrrolo[2,3-d]pyrimidin-5-yl)ethyl]benzoyl}amino)pent-2-enedioic acid"  
4DW  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.9.2  "(E,4S)-4-[[4-[2-(2-azanyl-4-oxidanylidene-1,7-dihydropyrrolo[2,3-d]pyrimidin-5-yl)ethyl]phenyl]carbonylamino]pent-2-enedioic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4DW  "Create component"  2015-03-05  RCSB  
4DW  "Modify synonyms"   2015-06-10  RCSB  
4DW  "Initial release"   2015-12-16  RCSB  
4DW  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     4DW
_pdbx_chem_comp_synonyms.name        pemetrexed
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
