data_IYV
# 
_chem_comp.id                                    IYV 
_chem_comp.name                                  "(2R,3R,4S,5R,6R)-2-[(1R,2R)-1-azanyl-2-oxidanyl-propyl]-6-methylsulfanyl-oxane-3,4,5-triol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H19 N O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-04 
_chem_comp.pdbx_modified_date                    2023-07-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        253.316 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IYV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7YN2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IYV CAA C1  C 0 1 N N R -28.057 -8.440  32.816 -0.334 1.617  -0.337 CAA IYV 1  
IYV CAB C2  C 0 1 N N S -29.449 -9.039  32.438 -1.788 1.151  -0.462 CAB IYV 2  
IYV CAC C3  C 0 1 N N R -30.635 -8.203  33.026 -2.120 0.228  0.715  CAC IYV 3  
IYV CAD C4  C 0 1 N N R -30.437 -7.997  34.565 -1.133 -0.943 0.730  CAD IYV 4  
IYV CAF C5  C 0 1 N N R -28.075 -8.287  34.420 0.583  0.392  -0.282 CAF IYV 5  
IYV CAG C6  C 0 1 N N R -26.715 -8.028  35.170 2.032  0.848  -0.097 CAG IYV 6  
IYV CAH C7  C 0 1 N N R -26.114 -6.670  34.860 2.948  -0.376 -0.042 CAH IYV 7  
IYV CAI C8  C 0 1 N N N -25.484 -6.072  36.133 4.397  0.079  0.142  CAI IYV 8  
IYV CAM C9  C 0 1 N N N -32.254 -9.579  35.937 -0.319 -3.385 -0.466 CAM IYV 9  
IYV NAO N1  N 0 1 N N N -26.823 -8.174  36.653 2.424  1.703  -1.226 NAO IYV 10 
IYV OAE O1  O 0 1 N N N -29.145 -7.342  34.819 0.201  -0.439 0.816  OAE IYV 11 
IYV OAJ O2  O 0 1 N N N -31.936 -8.845  32.775 -3.451 -0.270 0.571  OAJ IYV 12 
IYV OAL O3  O 0 1 N N N -27.776 -7.200  32.045 -0.178 2.384  0.858  OAL IYV 13 
IYV OAN O4  O 0 1 N N N -29.573 -9.261  31.006 -2.657 2.285  -0.440 OAN IYV 14 
IYV OAP O5  O 0 1 N N N -25.120 -6.855  33.848 2.567  -1.208 1.055  OAP IYV 15 
IYV SAK S1  S 0 1 N N N -30.492 -9.437  35.659 -1.318 -1.908 -0.795 SAK IYV 16 
IYV H1  H1  H 0 1 N N N -27.291 -9.190  32.569 -0.073 2.229  -1.200 H1  IYV 17 
IYV H2  H2  H 0 1 N N N -29.500 -10.023 32.927 -1.918 0.608  -1.398 H2  IYV 18 
IYV H3  H3  H 0 1 N N N -30.623 -7.213  32.547 -2.037 0.785  1.649  H3  IYV 19 
IYV H4  H4  H 0 1 N N N -31.243 -7.337  34.918 -1.338 -1.579 1.590  H4  IYV 20 
IYV H5  H5  H 0 1 N N N -28.405 -9.272  34.781 0.494  -0.171 -1.212 H5  IYV 21 
IYV H6  H6  H 0 1 N N N -26.007 -8.789  34.811 2.120  1.410  0.832  H6  IYV 22 
IYV H7  H7  H 0 1 N N N -26.906 -5.996  34.503 2.860  -0.938 -0.972 H7  IYV 23 
IYV H8  H8  H 0 1 N N N -26.262 -5.937  36.899 5.050  -0.793 0.182  H8  IYV 24 
IYV H9  H9  H 0 1 N N N -24.709 -6.754  36.514 4.688  0.714  -0.695 H9  IYV 25 
IYV H10 H10 H 0 1 N N N -25.031 -5.098  35.895 4.485  0.641  1.072  H10 IYV 26 
IYV H11 H11 H 0 1 N N N -32.453 -10.433 36.602 0.714  -3.091 -0.279 H11 IYV 27 
IYV H12 H12 H 0 1 N N N -32.627 -8.656  36.404 -0.713 -3.904 0.408  H12 IYV 28 
IYV H13 H13 H 0 1 N N N -32.765 -9.736  34.976 -0.357 -4.049 -1.330 H13 IYV 29 
IYV H14 H14 H 0 1 N N N -25.932 -7.998  37.071 2.351  1.204  -2.100 H14 IYV 30 
IYV H15 H15 H 0 1 N N N -27.491 -7.518  37.005 1.876  2.549  -1.245 H15 IYV 31 
IYV H17 H17 H 0 1 N N N -32.630 -8.311  33.145 -3.729 -0.863 1.283  H17 IYV 32 
IYV H18 H18 H 0 1 N N N -26.925 -6.858  32.294 -0.731 3.177  0.891  H18 IYV 33 
IYV H19 H19 H 0 1 N N N -30.430 -9.625  30.814 -3.595 2.063  -0.515 H19 IYV 34 
IYV H20 H20 H 0 1 N N N -24.726 -6.018  33.634 3.106  -2.005 1.151  H20 IYV 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IYV OAN CAB SING N N 1  
IYV OAL CAA SING N N 2  
IYV CAB CAA SING N N 3  
IYV CAB CAC SING N N 4  
IYV OAJ CAC SING N N 5  
IYV CAA CAF SING N N 6  
IYV CAC CAD SING N N 7  
IYV OAP CAH SING N N 8  
IYV CAF OAE SING N N 9  
IYV CAF CAG SING N N 10 
IYV CAD OAE SING N N 11 
IYV CAD SAK SING N N 12 
IYV CAH CAG SING N N 13 
IYV CAH CAI SING N N 14 
IYV CAG NAO SING N N 15 
IYV SAK CAM SING N N 16 
IYV CAA H1  SING N N 17 
IYV CAB H2  SING N N 18 
IYV CAC H3  SING N N 19 
IYV CAD H4  SING N N 20 
IYV CAF H5  SING N N 21 
IYV CAG H6  SING N N 22 
IYV CAH H7  SING N N 23 
IYV CAI H8  SING N N 24 
IYV CAI H9  SING N N 25 
IYV CAI H10 SING N N 26 
IYV CAM H11 SING N N 27 
IYV CAM H12 SING N N 28 
IYV CAM H13 SING N N 29 
IYV NAO H14 SING N N 30 
IYV NAO H15 SING N N 31 
IYV OAJ H17 SING N N 32 
IYV OAL H18 SING N N 33 
IYV OAN H19 SING N N 34 
IYV OAP H20 SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IYV InChI            InChI                1.06  "InChI=1S/C9H19NO5S/c1-3(11)4(10)8-6(13)5(12)7(14)9(15-8)16-2/h3-9,11-14H,10H2,1-2H3/t3-,4-,5+,6-,7-,8-,9-/m1/s1" 
IYV InChIKey         InChI                1.06  AEEIMWYSDWZKAT-HJTGYUAHSA-N                                                                                       
IYV SMILES_CANONICAL CACTVS               3.385 "CS[C@H]1O[C@H]([C@H](N)[C@@H](C)O)[C@H](O)[C@H](O)[C@H]1O"                                                       
IYV SMILES           CACTVS               3.385 "CS[CH]1O[CH]([CH](N)[CH](C)O)[CH](O)[CH](O)[CH]1O"                                                               
IYV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]([C@H]([C@@H]1[C@@H]([C@@H]([C@H]([C@H](O1)SC)O)O)O)N)O"                                                   
IYV SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C(C1C(C(C(C(O1)SC)O)O)O)N)O"                                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           IYV 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R},3~{R},4~{S},5~{R},6~{R})-2-[(1~{R},2~{R})-1-azanyl-2-oxidanyl-propyl]-6-methylsulfanyl-oxane-3,4,5-triol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IYV "Create component" 2022-08-04 PDBJ 
IYV "Initial release"  2023-08-02 RCSB 
# 
