data_8YV
#

_chem_comp.id                                   8YV
_chem_comp.name                                 "2-keto-D-gluconic acid"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H10 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(3S,4R,5R)-3,4,5,6-tetrahydroxy-2-oxohexanoic acid; D-fructosonic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-03-21
_chem_comp.pdbx_modified_date                   2020-06-24
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       194.139
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    8YV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5V7N
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
8YV  C4    C1   C  0  1  N  N  R  65.157  65.742  22.385  -0.573   0.077   0.320  C2   8YV   1  
8YV  C2    C2   C  0  1  N  N  N  63.691  63.953  23.338   1.798  -0.494  -0.126  C4   8YV   2  
8YV  O4    O1   O  0  1  N  N  N  66.105  66.009  21.352  -0.468  -0.665   1.537  O4   8YV   3  
8YV  O1A   O2   O  0  1  N  N  N  61.757  65.329  22.896   2.060   1.824  -0.370  O1   8YV   4  
8YV  C1    C3   C  0  1  N  N  N  62.454  64.764  23.728   2.559   0.781  -0.002  C5   8YV   5  
8YV  O1B   O3   O  0  1  N  N  N  62.246  64.789  25.002   3.801   0.776   0.518  O2   8YV   6  
8YV  O2    O4   O  0  1  N  N  N  64.085  63.011  23.988   2.296  -1.533   0.240  O    8YV   7  
8YV  C3    C4   C  0  1  N  N  S  64.450  64.410  22.094   0.408  -0.489  -0.709  C3   8YV   8  
8YV  O3    O5   O  0  1  N  N  N  63.506  64.560  21.063   0.028  -1.824  -1.046  O3   8YV   9  
8YV  C5    C5   C  0  1  N  N  R  65.845  65.668  23.749  -2.000  -0.033  -0.222  C1   8YV  10  
8YV  O5    O6   O  0  1  N  N  N  64.853  65.502  24.761  -2.105   0.709  -1.439  O5   8YV  11  
8YV  C6    C6   C  0  1  N  N  N  66.644  66.893  24.119  -2.981   0.533   0.806  C    8YV  12  
8YV  O6    O7   O  0  1  N  N  N  67.099  66.748  25.454  -4.320   0.325   0.352  O6   8YV  13  
8YV  H4    H1   H  0  1  N  N  N  64.400  66.540  22.416  -0.336   1.123   0.511  H1   8YV  14  
8YV  HO4   H2   H  0  1  N  N  N  66.544  66.833  21.530  -0.666  -1.607   1.441  H2   8YV  15  
8YV  HO1B  H3   H  0  1  N  N  N  61.474  65.311  25.187   4.255   1.628   0.578  H3   8YV  16  
8YV  H3    H4   H  0  1  N  N  N  65.203  63.653  21.831   0.392   0.131  -1.605  H4   8YV  17  
8YV  HO3   H5   H  0  1  N  N  N  62.681  64.857  21.429   0.020  -2.433  -0.295  H5   8YV  18  
8YV  H5    H6   H  0  1  N  N  N  66.519  64.799  23.748  -2.237  -1.079  -0.413  H6   8YV  19  
8YV  HO5   H7   H  0  1  N  N  N  64.442  64.651  24.665  -1.907   1.651  -1.344  H7   8YV  20  
8YV  H61   H8   H  0  1  N  N  N  67.505  66.992  23.442  -2.839   0.026   1.761  H8   8YV  21  
8YV  H62   H9   H  0  1  N  N  N  66.009  67.788  24.039  -2.801   1.600   0.932  H9   8YV  22  
8YV  HO6   H10  H  0  1  N  N  N  67.605  67.513  25.702  -4.997   0.660   0.956  H10  8YV  23  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8YV  O3   C3    SING  N  N   1  
8YV  O4   C4    SING  N  N   2  
8YV  C3   C4    SING  N  N   3  
8YV  C3   C2    SING  N  N   4  
8YV  C4   C5    SING  N  N   5  
8YV  O1A  C1    DOUB  N  N   6  
8YV  C2   C1    SING  N  N   7  
8YV  C2   O2    DOUB  N  N   8  
8YV  C1   O1B   SING  N  N   9  
8YV  C5   C6    SING  N  N  10  
8YV  C5   O5    SING  N  N  11  
8YV  C6   O6    SING  N  N  12  
8YV  C4   H4    SING  N  N  13  
8YV  O4   HO4   SING  N  N  14  
8YV  O1B  HO1B  SING  N  N  15  
8YV  C3   H3    SING  N  N  16  
8YV  O3   HO3   SING  N  N  17  
8YV  C5   H5    SING  N  N  18  
8YV  O5   HO5   SING  N  N  19  
8YV  C6   H61   SING  N  N  20  
8YV  C6   H62   SING  N  N  21  
8YV  O6   HO6   SING  N  N  22  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8YV  SMILES            ACDLabs               12.01  "C(C(CO)O)(O)C(C(C(=O)O)=O)O"  
8YV  InChI             InChI                 1.03   "InChI=1S/C6H10O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-4,7-10H,1H2,(H,12,13)/t2-,3-,4+/m1/s1"  
8YV  InChIKey          InChI                 1.03   VBUYCZFBVCCYFD-JJYYJPOSSA-N  
8YV  SMILES_CANONICAL  CACTVS                3.385  "OC[C@@H](O)[C@@H](O)[C@H](O)C(=O)C(O)=O"  
8YV  SMILES            CACTVS                3.385  "OC[CH](O)[CH](O)[CH](O)C(=O)C(O)=O"  
8YV  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C([C@H]([C@H]([C@@H](C(=O)C(=O)O)O)O)O)O"  
8YV  SMILES            "OpenEye OEToolkits"  2.0.6  "C(C(C(C(C(=O)C(=O)O)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
8YV  "SYSTEMATIC NAME"  ACDLabs               12.01  "D-fructosonic acid"  
8YV  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(3~{S},4~{R},5~{R})-3,4,5,6-tetrakis(oxidanyl)-2-oxidanylidene-hexanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8YV  "Create component"  2017-03-21  RCSB  
8YV  "Modify name"       2017-03-21  RCSB  
8YV  "Initial release"   2017-03-29  RCSB  
8YV  "Modify synonyms"   2020-05-26  PDBE  
8YV  "Modify atom id"    2020-06-24  RCSB  
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  8YV  "(3S,4R,5R)-3,4,5,6-tetrahydroxy-2-oxohexanoic acid"  ?  ?  
2  8YV  "D-fructosonic acid"                                  ?  ?  
##
