data_7CV
#

_chem_comp.id                                   7CV
_chem_comp.name                                 "6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose"
_chem_comp.type                                 "L-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C8 H16 O5"
_chem_comp.mon_nstd_parent_comp_id              RAM
_chem_comp.pdbx_synonyms                        "6-deoxy-2,3-di-O-methyl-alpha-L-mannose; 6-deoxy-2,3-di-O-methyl-L-mannose; 6-deoxy-2,3-di-O-methyl-mannose"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2016-10-05
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       192.210
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    7CV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5TIP
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  7CV  "6-deoxy-2,3-di-O-methyl-alpha-L-mannose"  PDB  ?  
2  7CV  "6-deoxy-2,3-di-O-methyl-L-mannose"        PDB  ?  
3  7CV  "6-deoxy-2,3-di-O-methyl-mannose"          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
7CV  C1   C1   C  0  1  N  N  R  50.171  63.927  72.457   1.245   1.147   0.676  C1   7CV   1  
7CV  C2   C2   C  0  1  N  N  R  50.387  65.024  71.453   1.212  -0.338   0.306  C2   7CV   2  
7CV  C3   C3   C  0  1  N  N  R  50.423  64.414  70.054  -0.226  -0.854   0.425  C3   7CV   3  
7CV  C4   C4   C  0  1  N  N  S  49.149  63.632  69.783  -1.135  -0.009  -0.473  C4   7CV   4  
7CV  C5   C5   C  0  1  N  N  S  49.022  62.589  70.876  -1.011   1.463  -0.072  C5   7CV   5  
7CV  C6   C6   C  0  1  N  N  N  47.764  61.775  70.732  -1.871   2.320  -1.003  C6   7CV   6  
7CV  O2   O2   O  0  1  N  N  N  49.352  65.988  71.619   1.669  -0.505  -1.038  O2   7CV   7  
7CV  O3   O3   O  0  1  N  N  N  50.550  65.418  69.089  -0.279  -2.221   0.012  O3   7CV   8  
7CV  O4   O4   O  0  1  N  N  N  49.273  63.059  68.512  -2.490  -0.435  -0.315  O4   7CV   9  
7CV  O5   O5   O  0  1  N  N  N  49.019  63.230  72.139   0.355   1.870  -0.176  O5   7CV  10  
7CV  C24  C24  C  0  1  N  N  N  49.455  66.841  72.759   3.079  -0.709  -1.151  C24  7CV  11  
7CV  C27  C27  C  0  1  N  N  N  51.867  65.807  68.744  -1.293  -2.986   0.666  C27  7CV  12  
7CV  O1   O1   O  0  1  N  Y  N  51.380  63.379  72.617   0.839   1.308   2.037  O1   7CV  13  
7CV  H1   H1   H  0  1  N  N  N  49.948  64.456  73.395   2.259   1.530   0.552  H1   7CV  14  
7CV  H2   H2   H  0  1  N  N  N  51.363  65.492  71.650   1.858  -0.897   0.982  H2   7CV  15  
7CV  H3   H3   H  0  1  N  N  N  51.277  63.722  69.998  -0.558  -0.772   1.460  H3   7CV  16  
7CV  H4   H4   H  0  1  N  N  N  48.287  64.314  69.827  -0.834  -0.130  -1.514  H4   7CV  17  
7CV  H5   H5   H  0  1  N  N  N  49.885  61.910  70.808  -1.351   1.590   0.956  H5   7CV  18  
7CV  H61  H6   H  0  1  N  N  N  47.712  61.033  71.542  -2.913   2.009  -0.925  H61  7CV  19  
7CV  H62  H7   H  0  1  N  N  N  46.889  62.440  70.787  -1.782   3.368  -0.718  H62  7CV  20  
7CV  H63  H8   H  0  1  N  N  N  47.771  61.258  69.761  -1.531   2.193  -2.031  H63  7CV  21  
7CV  HO4  H9   H  0  1  N  Y  N  48.489  62.561  68.311  -3.123   0.058  -0.855  HO4  7CV  22  
7CV  H10  H10  H  0  1  N  N  N  48.603  67.536  72.776   3.605   0.151  -0.737  H10  7CV  23  
7CV  H11  H11  H  0  1  N  N  N  49.449  66.231  73.675   3.361  -1.607  -0.601  H11  7CV  24  
7CV  H12  H12  H  0  1  N  N  N  50.393  67.413  72.706   3.346  -0.827  -2.201  H12  7CV  25  
7CV  H13  H13  H  0  1  N  N  N  51.828  66.598  67.981  -1.114  -2.982   1.742  H13  7CV  26  
7CV  H14  H14  H  0  1  N  N  N  52.383  66.186  69.638  -2.269  -2.549   0.459  H14  7CV  27  
7CV  H15  H15  H  0  1  N  N  N  52.413  64.939  68.345  -1.268  -4.012   0.298  H15  7CV  28  
7CV  HO1  H16  H  0  1  N  Y  N  51.325  62.668  73.245   0.836   2.226   2.341  HO1  7CV  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
7CV  O4   C4   SING  N  N   1  
7CV  C27  O3   SING  N  N   2  
7CV  O3   C3   SING  N  N   3  
7CV  C4   C3   SING  N  N   4  
7CV  C4   C5   SING  N  N   5  
7CV  C3   C2   SING  N  N   6  
7CV  C6   C5   SING  N  N   7  
7CV  C5   O5   SING  N  N   8  
7CV  C2   O2   SING  N  N   9  
7CV  C2   C1   SING  N  N  10  
7CV  O2   C24  SING  N  N  11  
7CV  O5   C1   SING  N  N  12  
7CV  C1   O1   SING  N  N  13  
7CV  C1   H1   SING  N  N  14  
7CV  C2   H2   SING  N  N  15  
7CV  C3   H3   SING  N  N  16  
7CV  C4   H4   SING  N  N  17  
7CV  C5   H5   SING  N  N  18  
7CV  C6   H61  SING  N  N  19  
7CV  C6   H62  SING  N  N  20  
7CV  C6   H63  SING  N  N  21  
7CV  O4   HO4  SING  N  N  22  
7CV  C24  H10  SING  N  N  23  
7CV  C24  H11  SING  N  N  24  
7CV  C24  H12  SING  N  N  25  
7CV  C27  H13  SING  N  N  26  
7CV  C27  H14  SING  N  N  27  
7CV  C27  H15  SING  N  N  28  
7CV  O1   HO1  SING  N  N  29  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
7CV  SMILES            ACDLabs               12.01  "C1(O)C(OC)C(C(C(O1)C)O)OC"  
7CV  InChI             InChI                 1.03   "InChI=1S/C8H16O5/c1-4-5(9)6(11-2)7(12-3)8(10)13-4/h4-10H,1-3H3/t4-,5-,6+,7+,8+/m0/s1"  
7CV  InChIKey          InChI                 1.03   SXWBIRCAXZNEGK-TVNFTVLESA-N  
7CV  SMILES_CANONICAL  CACTVS                3.385  "CO[C@H]1[C@H](O)O[C@@H](C)[C@H](O)[C@H]1OC"  
7CV  SMILES            CACTVS                3.385  "CO[CH]1[CH](O)O[CH](C)[CH](O)[CH]1OC"  
7CV  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O)OC)OC)O"  
7CV  SMILES            "OpenEye OEToolkits"  2.0.6  "CC1C(C(C(C(O1)O)OC)OC)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
7CV  "SYSTEMATIC NAME"                      ACDLabs               12.01  "6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose"  
7CV  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  2.0.6  "(2~{R},3~{R},4~{R},5~{S},6~{S})-3,4-dimethoxy-6-methyl-oxane-2,5-diol"  
7CV  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    "LRhap[2Me,3Me]a"  
7CV  "COMMON NAME"                          GMML                  1.0    2-methyl-3-methyl-a-L-rhamnoopyranose  
#
_pdbx_chem_comp_related.comp_id            7CV
_pdbx_chem_comp_related.related_comp_id    RAM
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  7CV  C1   RAM  C1   "Carbohydrate core"  
 2  7CV  C2   RAM  C2   "Carbohydrate core"  
 3  7CV  C3   RAM  C3   "Carbohydrate core"  
 4  7CV  C4   RAM  C4   "Carbohydrate core"  
 5  7CV  C5   RAM  C5   "Carbohydrate core"  
 6  7CV  C6   RAM  C6   "Carbohydrate core"  
 7  7CV  O1   RAM  O1   "Carbohydrate core"  
 8  7CV  O2   RAM  O2   "Carbohydrate core"  
 9  7CV  O3   RAM  O3   "Carbohydrate core"  
10  7CV  O4   RAM  O4   "Carbohydrate core"  
11  7CV  O5   RAM  O5   "Carbohydrate core"  
12  7CV  H1   RAM  H1   "Carbohydrate core"  
13  7CV  HO1  RAM  HO1  "Carbohydrate core"  
14  7CV  H2   RAM  H2   "Carbohydrate core"  
15  7CV  H3   RAM  H3   "Carbohydrate core"  
16  7CV  H4   RAM  H4   "Carbohydrate core"  
17  7CV  H5   RAM  H5   "Carbohydrate core"  
18  7CV  H61  RAM  H61  "Carbohydrate core"  
19  7CV  H62  RAM  H62  "Carbohydrate core"  
20  7CV  H63  RAM  H63  "Carbohydrate core"  
21  7CV  HO4  RAM  HO4  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
7CV  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
7CV  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
7CV  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
7CV  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
7CV  "Create component"          2016-10-05  RCSB  
7CV  "Initial release"           2017-10-18  RCSB  
7CV  "Other modification"        2020-07-03  RCSB  
7CV  "Modify parent residue"     2020-07-17  RCSB  
7CV  "Modify synonyms"           2020-07-17  RCSB  
7CV  "Modify internal type"      2020-07-17  RCSB  
7CV  "Modify linking type"       2020-07-17  RCSB  
7CV  "Modify atom id"            2020-07-17  RCSB  
7CV  "Modify component atom id"  2020-07-17  RCSB  
7CV  "Modify leaving atom flag"  2020-07-17  RCSB  
##
