data_JOU
# 
_chem_comp.id                                    JOU 
_chem_comp.name                                  "(2R,5R)-2-[(1S)-1-[2-(cyanomethylsulfanyl)ethanoylamino]-1-methoxy-2-oxidanyl-2-oxidanylidene-ethyl]-5-[(1-methyl-1,2,3,4-tetrazol-5-yl)sulfanylmethyl]-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H19 N7 O6 S3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "hydrolysed cefmetazole" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-05-06 
_chem_comp.pdbx_modified_date                    2023-03-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        489.550 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JOU 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ZO7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JOU C02  C1  C 0 1 N N N -21.496 26.137 1.541  -1.750 0.297  1.268  C02  JOU 1  
JOU C04  C2  C 0 1 N N N -20.245 25.584 0.938  -1.130 -0.654 0.314  C04  JOU 2  
JOU C06  C3  C 0 1 N N R -19.266 24.804 -1.428 1.015  -1.456 -0.505 C06  JOU 3  
JOU C07  C4  C 0 1 N N S -18.453 26.042 -2.024 2.168  -1.984 0.352  C07  JOU 4  
JOU C09  C5  C 0 1 N N N -16.762 24.498 -3.150 3.408  0.112  0.265  C09  JOU 5  
JOU C10  C6  C 0 1 N N N -15.280 24.152 -3.345 4.102  1.267  0.939  C10  JOU 6  
JOU C12  C7  C 0 1 N N N -14.392 25.338 -0.643 5.540  3.701  0.670  C12  JOU 7  
JOU C13  C8  C 0 1 N N N -14.240 23.932 -0.066 6.125  4.712  -0.225 C13  JOU 8  
JOU C17  C9  C 0 1 N N N -18.713 27.585 -3.837 2.632  -3.321 2.286  C17  JOU 9  
JOU C18  C10 C 0 1 N N N -18.370 27.177 -1.009 3.150  -2.718 -0.524 C18  JOU 10 
JOU C22  C11 C 0 1 N N N -18.035 24.180 0.896  -1.437 -2.032 -1.751 C22  JOU 11 
JOU C23  C12 C 0 1 N N R -19.352 24.584 1.734  -2.099 -1.434 -0.507 C23  JOU 12 
JOU C24  C13 C 0 1 N N N -20.184 23.393 1.967  -3.239 -0.513 -0.944 C24  JOU 13 
JOU C26  C14 C 0 1 Y N N -20.901 21.109 3.527  -5.445 0.963  -0.274 C26  JOU 14 
JOU C31  C15 C 0 1 N N N -20.335 19.476 1.673  -6.825 1.550  1.761  C31  JOU 15 
JOU N05  N1  N 0 1 N N N -20.334 25.359 -0.680 0.115  -0.666 0.324  N05  JOU 16 
JOU N08  N2  N 0 1 N N N -17.080 25.638 -2.312 2.843  -0.861 1.007  N08  JOU 17 
JOU N14  N3  N 0 1 N N N -14.115 22.906 0.395  6.577  5.492  -0.916 N14  JOU 18 
JOU N27  N4  N 0 1 Y N N -21.903 21.173 4.461  -5.509 1.268  -1.552 N27  JOU 19 
JOU N28  N5  N 0 1 Y N N -22.697 20.089 4.288  -6.510 2.039  -1.780 N28  JOU 20 
JOU N29  N6  N 0 1 Y N N -22.242 19.369 3.286  -7.149 2.280  -0.686 N29  JOU 21 
JOU N30  N7  N 0 1 Y N N -21.135 19.971 2.785  -6.479 1.587  0.338  N30  JOU 22 
JOU O01  O1  O 0 1 N N N -21.635 26.072 2.789  -1.918 1.587  0.920  O01  JOU 23 
JOU O03  O2  O 0 1 N N N -22.374 26.633 0.748  -2.110 -0.089 2.361  O03  JOU 24 
JOU O15  O3  O 0 1 N N N -17.631 23.840 -3.648 3.358  0.058  -0.946 O15  JOU 25 
JOU O16  O4  O 0 1 N N N -19.157 26.411 -3.173 1.655  -2.876 1.343  O16  JOU 26 
JOU O19  O5  O 0 1 N N N -19.208 28.121 -0.957 3.319  -3.906 -0.379 O19  JOU 27 
JOU O20  O6  O 0 1 N N N -17.406 27.167 -0.191 3.837  -2.053 -1.466 O20  JOU 28 
JOU S11  S1  S 0 1 N N N -14.222 25.356 -2.462 4.754  2.399  -0.319 S11  JOU 29 
JOU S21  S2  S 0 1 N N N -18.347 23.564 -0.483 0.101  -2.856 -1.221 S21  JOU 30 
JOU S25  S3  S 0 1 N N N -19.556 22.335 3.310  -4.243 -0.071 0.496  S25  JOU 31 
JOU H061 H2  H 0 0 N N N -19.679 24.253 -2.286 1.413  -0.833 -1.306 H061 JOU 32 
JOU H101 H3  H 0 0 N N N -15.088 23.143 -2.950 3.392  1.798  1.573  H101 JOU 33 
JOU H102 H4  H 0 0 N N N -15.040 24.177 -4.418 4.923  0.891  1.550  H102 JOU 34 
JOU H121 H5  H 0 0 N N N -13.617 25.986 -0.208 6.325  3.264  1.287  H121 JOU 35 
JOU H122 H6  H 0 0 N N N -15.386 25.726 -0.376 4.793  4.171  1.310  H122 JOU 36 
JOU H172 H7  H 0 0 N N N -19.343 27.768 -4.720 2.147  -3.923 3.055  H172 JOU 37 
JOU H171 H8  H 0 0 N N N -18.784 28.443 -3.152 3.383  -3.922 1.775  H171 JOU 38 
JOU H173 H9  H 0 0 N N N -17.668 27.454 -4.153 3.110  -2.457 2.749  H173 JOU 39 
JOU H222 H10 H 0 0 N N N -17.461 23.448 1.482  -2.106 -2.759 -2.212 H222 JOU 40 
JOU H221 H11 H 0 0 N N N -17.428 25.085 0.744  -1.205 -1.240 -2.463 H221 JOU 41 
JOU H231 H12 H 0 0 N N N -19.044 25.040 2.687  -2.509 -2.241 0.100  H231 JOU 42 
JOU H241 H13 H 0 0 N N N -21.201 23.722 2.227  -2.825 0.392  -1.389 H241 JOU 43 
JOU H242 H14 H 0 0 N N N -20.215 22.801 1.040  -3.861 -1.026 -1.677 H242 JOU 44 
JOU H311 H15 H 0 0 N N N -20.767 18.536 1.300  -7.505 0.719  1.947  H311 JOU 45 
JOU H313 H16 H 0 0 N N N -20.329 20.223 0.865  -5.918 1.418  2.351  H313 JOU 46 
JOU H312 H17 H 0 0 N N N -19.305 19.296 2.014  -7.308 2.486  2.042  H312 JOU 47 
JOU H081 H20 H 0 0 N N N -16.330 26.168 -1.916 2.883  -0.818 1.975  H081 JOU 48 
JOU H4   H21 H 0 1 N N N -22.475 26.442 3.034  -2.326 2.169  1.576  H4   JOU 49 
JOU H5   H22 H 0 1 N N N -17.465 27.926 0.378  4.455  -2.567 -2.004 H5   JOU 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JOU C17 O16  SING N N 1  
JOU O15 C09  DOUB N N 2  
JOU C10 C09  SING N N 3  
JOU C10 S11  SING N N 4  
JOU O16 C07  SING N N 5  
JOU C09 N08  SING N N 6  
JOU S11 C12  SING N N 7  
JOU N08 C07  SING N N 8  
JOU C07 C06  SING N N 9  
JOU C07 C18  SING N N 10 
JOU C06 N05  SING N N 11 
JOU C06 S21  SING N N 12 
JOU C18 O19  DOUB N N 13 
JOU C18 O20  SING N N 14 
JOU N05 C04  DOUB N N 15 
JOU C12 C13  SING N N 16 
JOU S21 C22  SING N N 17 
JOU C13 N14  TRIP N N 18 
JOU O03 C02  DOUB N N 19 
JOU C22 C23  SING N N 20 
JOU C04 C02  SING N N 21 
JOU C04 C23  SING N N 22 
JOU C02 O01  SING N N 23 
JOU C31 N30  SING N N 24 
JOU C23 C24  SING N N 25 
JOU C24 S25  SING N N 26 
JOU N30 N29  SING Y N 27 
JOU N30 C26  SING Y N 28 
JOU N29 N28  DOUB Y N 29 
JOU S25 C26  SING N N 30 
JOU C26 N27  DOUB Y N 31 
JOU N28 N27  SING Y N 32 
JOU C06 H061 SING N N 33 
JOU C10 H101 SING N N 34 
JOU C10 H102 SING N N 35 
JOU C12 H121 SING N N 36 
JOU C12 H122 SING N N 37 
JOU C17 H172 SING N N 38 
JOU C17 H171 SING N N 39 
JOU C17 H173 SING N N 40 
JOU C22 H222 SING N N 41 
JOU C22 H221 SING N N 42 
JOU C23 H231 SING N N 43 
JOU C24 H241 SING N N 44 
JOU C24 H242 SING N N 45 
JOU C31 H311 SING N N 46 
JOU C31 H313 SING N N 47 
JOU C31 H312 SING N N 48 
JOU N08 H081 SING N N 49 
JOU O01 H4   SING N N 50 
JOU O20 H5   SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JOU InChI            InChI                1.06  "InChI=1S/C15H19N7O6S3/c1-22-14(19-20-21-22)31-6-8-5-30-12(17-10(8)11(24)25)15(28-2,13(26)27)18-9(23)7-29-4-3-16/h8,12H,4-7H2,1-2H3,(H,18,23)(H,24,25)(H,26,27)/t8-,12-,15-/m1/s1" 
JOU InChIKey         InChI                1.06  VZQGYYZNCGIOGL-AOAMOSOWSA-N                                                                                                                                                        
JOU SMILES_CANONICAL CACTVS               3.385 "CO[C@](NC(=O)CSCC#N)([C@H]1SC[C@H](CSc2nnnn2C)C(=N1)C(O)=O)C(O)=O"                                                                                                                
JOU SMILES           CACTVS               3.385 "CO[C](NC(=O)CSCC#N)([CH]1SC[CH](CSc2nnnn2C)C(=N1)C(O)=O)C(O)=O"                                                                                                                   
JOU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1c(nnn1)SC[C@H]2CS[C@@H](N=C2C(=O)O)[C@@](C(=O)O)(NC(=O)CSCC#N)OC"                                                                                                              
JOU SMILES           "OpenEye OEToolkits" 2.0.7 "Cn1c(nnn1)SCC2CSC(N=C2C(=O)O)C(C(=O)O)(NC(=O)CSCC#N)OC"                                                                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           JOU 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R},5~{R})-2-[(1~{S})-1-[2-(cyanomethylsulfanyl)ethanoylamino]-1-methoxy-2-oxidanyl-2-oxidanylidene-ethyl]-5-[(1-methyl-1,2,3,4-tetrazol-5-yl)sulfanylmethyl]-5,6-dihydro-2~{H}-1,3-thiazine-4-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JOU "Create component"  2022-05-06 PDBE 
JOU "Modify descriptor" 2022-08-22 RCSB 
JOU "Initial release"   2023-03-08 RCSB 
# 
