data_HMU
#

_chem_comp.id                                   HMU
_chem_comp.name                                 "5-HYDROXYMETHYL URACIL"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C5 H6 N2 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "5-(HYDROXYMETHYL)PYRIMIDINE-2,4(1H,3H)-DIONE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-03-19
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       142.113
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    HMU
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       ?
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
HMU  N1    N1    N  0  1  N  N  N  4.328  20.980  42.926   1.402  -0.001  -1.017  N1    HMU   1  
HMU  C2    C2    C  0  1  N  N  N  4.245  22.334  42.473   0.339   0.000  -1.842  C2    HMU   2  
HMU  O2    O2    O  0  1  N  N  N  5.170  23.246  42.899   0.515   0.000  -3.045  O2    HMU   3  
HMU  N3    N3    N  0  1  N  N  N  3.137  22.528  41.576  -0.914   0.002  -1.354  N3    HMU   4  
HMU  C4    C4    C  0  1  N  N  N  2.248  21.500  41.163  -1.126  -0.002  -0.023  C4    HMU   5  
HMU  O3    O3    O  0  1  N  N  N  1.211  18.816  39.902   1.042  -0.000   3.007  O3    HMU   6  
HMU  O4    O4    O  0  1  N  N  N  1.326  21.668  40.316  -2.261  -0.001   0.419  O4    HMU   7  
HMU  C5    C5    C  0  1  N  N  N  2.409  20.090  41.665  -0.017   0.001   0.856  C5    HMU   8  
HMU  CM5   CM5   C  0  1  N  N  N  1.523  18.858  41.271  -0.226   0.001   2.349  CM5   HMU   9  
HMU  C6    C6    C  0  1  N  N  N  3.480  19.923  42.592   1.230  -0.000   0.340  C6    HMU  10  
HMU  H1    H1    H  0  1  N  N  N  4.332  21.025  43.945   2.298  -0.002  -1.387  H1    HMU  11  
HMU  H2    H2    H  0  1  N  N  N  2.969  23.463  41.206  -1.669   0.003  -1.963  H2    HMU  12  
HMU  H3    H3    H  0  1  N  N  N  1.144  17.873  39.607   0.863  -0.000   3.958  H3    HMU  13  
HMU  HM51  1HM5  H  0  0  N  N  N  2.066  17.938  41.534  -0.786  -0.887   2.637  HM51  HMU  14  
HMU  HM52  2HM5  H  0  0  N  N  N  0.574  18.949  41.820  -0.783   0.892   2.637  HM52  HMU  15  
HMU  H6    H6    H  0  1  N  N  N  3.636  18.973  43.038   2.088  -0.001   0.996  H6    HMU  16  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
HMU  N1   C2    SING  N  N   1  
HMU  N1   C6    SING  N  N   2  
HMU  N1   H1    SING  N  N   3  
HMU  C2   O2    DOUB  N  N   4  
HMU  C2   N3    SING  N  N   5  
HMU  N3   C4    SING  N  N   6  
HMU  N3   H2    SING  N  N   7  
HMU  C4   O4    DOUB  N  N   8  
HMU  C4   C5    SING  N  N   9  
HMU  O3   CM5   SING  N  N  10  
HMU  O3   H3    SING  N  N  11  
HMU  C5   CM5   SING  N  N  12  
HMU  C5   C6    DOUB  N  N  13  
HMU  CM5  HM51  SING  N  N  14  
HMU  CM5  HM52  SING  N  N  15  
HMU  C6   H6    SING  N  N  16  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
HMU  SMILES            ACDLabs               10.04  "O=C1C(=CNC(=O)N1)CO"  
HMU  SMILES_CANONICAL  CACTVS                3.341  "OCC1=CNC(=O)NC1=O"  
HMU  SMILES            CACTVS                3.341  "OCC1=CNC(=O)NC1=O"  
HMU  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C1=C(C(=O)NC(=O)N1)CO"  
HMU  SMILES            "OpenEye OEToolkits"  1.5.0  "C1=C(C(=O)NC(=O)N1)CO"  
HMU  InChI             InChI                 1.03   "InChI=1S/C5H6N2O3/c8-2-3-1-6-5(10)7-4(3)9/h1,8H,2H2,(H2,6,7,9,10)"  
HMU  InChIKey          InChI                 1.03   JDBGXEHEIRGOBU-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
HMU  "SYSTEMATIC NAME"  ACDLabs               10.04  "5-(hydroxymethyl)pyrimidine-2,4(1H,3H)-dione"  
HMU  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "5-(hydroxymethyl)-1H-pyrimidine-2,4-dione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
HMU  "Create component"   2003-03-19  EBI   
HMU  "Modify descriptor"  2011-06-04  RCSB  
HMU  "Modify synonyms"    2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     HMU
_pdbx_chem_comp_synonyms.name        "5-(HYDROXYMETHYL)PYRIMIDINE-2,4(1H,3H)-DIONE"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
