data_RLT
#

_chem_comp.id                                   RLT
_chem_comp.name                                 
;N-(4-fluorobenzyl)-5-hydroxy-1-methyl-2-(1-methyl-1-{[(5-methyl-1,3,4-oxadiazol-2-yl)carbonyl]amino}ethyl)-6-oxo-1,6-di
hydropyrimidine-4-carboxamide
;

_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAD
_chem_comp.formula                              "C20 H21 F N6 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "RALTEGRAVIR, MK0518"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-12-28
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       444.416
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RLT
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3L2T
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RLT  CAA   CAA   C  0  1  N  N  N  -41.777  23.422  -19.563   7.458   3.450  -1.241  CAA   RLT   1  
RLT  CAB   CAB   C  0  1  N  N  N  -36.627  27.309  -19.717   2.855  -2.595   0.918  CAB   RLT   2  
RLT  CAC   CAC   C  0  1  N  N  N  -38.253  29.880  -23.082   1.979  -0.485   2.630  CAC   RLT   3  
RLT  CAD   CAD   C  0  1  N  N  N  -36.082  28.644  -23.206   0.513   1.022   1.281  CAD   RLT   4  
RLT  OAE   OAE   O  0  1  N  N  N  -36.294  33.708  -18.628  -3.248  -3.017  -1.022  OAE   RLT   5  
RLT  OAF   OAF   O  0  1  N  N  N  -39.691  28.529  -20.670   3.174   1.885   1.665  OAF   RLT   6  
RLT  OAG   OAG   O  0  1  N  N  N  -35.958  28.788  -17.548   1.433  -4.672  -0.113  OAG   RLT   7  
RLT  OAH   OAH   O  0  1  N  N  N  -35.766  31.244  -17.222  -1.258  -4.557  -0.880  OAH   RLT   8  
RLT  FAI   FAI   F  0  1  N  N  N  -40.957  38.250  -20.731  -6.167   4.586   0.336  FAI   RLT   9  
RLT  CAJ   CAJ   C  0  1  Y  N  N  -39.680  36.769  -22.081  -5.273   2.986  -1.166  CAJ   RLT  10  
RLT  CAK   CAK   C  0  1  Y  N  N  -38.918  37.358  -19.850  -5.933   2.338   1.046  CAK   RLT  11  
RLT  CAL   CAL   C  0  1  Y  N  N  -38.539  35.966  -22.213  -4.892   1.685  -1.432  CAL   RLT  12  
RLT  CAM   CAM   C  0  1  Y  N  N  -37.785  36.554  -19.995  -5.551   1.037   0.778  CAM   RLT  13  
RLT  CAN   CAN   C  0  1  N  N  N  -36.393  34.975  -21.393  -4.615  -0.708  -0.753  CAN   RLT  14  
RLT  NAO   NAO   N  0  1  Y  N  N  -39.537  23.984  -20.630   5.955   1.510  -1.777  NAO   RLT  15  
RLT  NAP   NAP   N  0  1  Y  N  N  -38.895  24.980  -20.999   4.913   0.936  -1.287  NAP   RLT  16  
RLT  NAQ   NAQ   N  0  1  N  N  N  -36.786  30.908  -20.800  -0.488  -1.245   0.319  NAQ   RLT  17  
RLT  NAR   NAR   N  0  1  N  N  N  -36.426  33.574  -20.939  -3.208  -0.890  -0.387  NAR   RLT  18  
RLT  NAS   NAS   N  0  1  N  N  N  -37.938  27.655  -21.899   2.615   0.175   0.362  NAS   RLT  19  
RLT  OAT   OAT   O  0  1  Y  N  N  -40.791  25.813  -20.194   5.420   2.576  -0.003  OAT   RLT  20  
RLT  CAU   CAU   C  0  1  N  N  N  -36.379  33.067  -19.671  -2.615  -2.088  -0.561  CAU   RLT  21  
RLT  CAV   CAV   C  0  1  N  N  N  -39.070  27.560  -21.113   3.405   1.221   0.673  CAV   RLT  22  
RLT  CAW   CAW   C  0  1  Y  N  N  -40.704  24.415  -20.129   6.294   2.519  -1.017  CAW   RLT  23  
RLT  CAX   CAX   C  0  1  Y  N  N  -39.863  37.466  -20.887  -5.794   3.314   0.075  CAX   RLT  24  
RLT  CAY   CAY   C  0  1  Y  N  N  -37.605  35.855  -21.194  -5.031   0.711  -0.461  CAY   RLT  25  
RLT  CAZ   CAZ   C  0  1  N  N  N  -36.138  30.788  -18.481  -0.579  -3.500  -0.369  CAZ   RLT  26  
RLT  CBA   CBA   C  0  1  Y  N  N  -39.588  26.122  -20.768   4.550   1.562  -0.191  CBA   RLT  27  
RLT  CBB   CBB   C  0  1  N  N  N  -36.436  31.532  -19.646  -1.194  -2.271  -0.191  CBB   RLT  28  
RLT  CBC   CBC   C  0  1  N  N  N  -36.882  29.575  -20.949   0.762  -1.364   0.656  CBC   RLT  29  
RLT  CBD   CBD   C  0  1  N  N  N  -36.221  29.422  -18.576   0.833  -3.619   0.016  CBD   RLT  30  
RLT  NBE   NBE   N  0  1  N  N  N  -36.588  28.791  -19.791   1.447  -2.526   0.520  NBE   RLT  31  
RLT  CBF   CBF   C  0  1  N  N  N  -37.296  28.946  -22.329   1.477  -0.164   1.221  CBF   RLT  32  
RLT  HAA   HAA   H  0  1  N  N  N  -41.407  22.390  -19.654   7.136   4.295  -1.850  HAA   RLT  33  
RLT  HAAA  HAAA  H  0  0  N  N  N  -41.966  23.651  -18.504   7.824   3.812  -0.281  HAAA  RLT  34  
RLT  HAAB  HAAB  H  0  0  N  N  N  -42.711  23.528  -20.134   8.257   2.915  -1.756  HAAB  RLT  35  
RLT  HAB   HAB   H  0  1  N  N  N  -36.355  26.985  -18.702   2.922  -2.890   1.965  HAB   RLT  36  
RLT  HABA  HABA  H  0  0  N  N  N  -37.642  26.957  -19.954   3.371  -3.329   0.299  HABA  RLT  37  
RLT  HABB  HABB  H  0  0  N  N  N  -35.914  26.887  -20.440   3.319  -1.618   0.785  HABB  RLT  38  
RLT  HAC   HAC   H  0  1  N  N  N  -39.127  30.097  -22.450   1.133  -0.737   3.269  HAC   RLT  39  
RLT  HACA  HACA  H  0  0  N  N  N  -37.734  30.819  -23.324   2.666  -1.330   2.587  HACA  RLT  40  
RLT  HACB  HACB  H  0  0  N  N  N  -38.584  29.394  -24.011   2.497   0.383   3.038  HACB  RLT  41  
RLT  HAD   HAD   H  0  1  N  N  N  -35.396  27.975  -22.666   1.030   1.891   1.689  HAD   RLT  42  
RLT  HADA  HADA  H  0  0  N  N  N  -36.413  28.157  -24.135   0.155   1.251   0.277  HADA  RLT  43  
RLT  HADB  HADB  H  0  0  N  N  N  -35.562  29.583  -23.448  -0.334   0.770   1.920  HADB  RLT  44  
RLT  HOAH  HOAH  H  0  0  N  N  N  -35.634  30.503  -16.643  -0.730  -5.363  -0.959  HOAH  RLT  45  
RLT  HAJ   HAJ   H  0  1  N  N  N  -40.399  36.846  -22.883  -5.161   3.748  -1.923  HAJ   RLT  46  
RLT  HAK   HAK   H  0  1  N  N  N  -39.071  37.904  -18.931  -6.339   2.592   2.014  HAK   RLT  47  
RLT  HAL   HAL   H  0  1  N  N  N  -38.383  35.420  -23.132  -4.486   1.428  -2.400  HAL   RLT  48  
RLT  HAM   HAM   H  0  1  N  N  N  -37.062  36.473  -19.197  -5.659   0.275   1.536  HAM   RLT  49  
RLT  HAN   HAN   H  0  1  N  N  N  -35.571  35.456  -20.843  -4.743  -0.913  -1.816  HAN   RLT  50  
RLT  HANA  HANA  H  0  0  N  N  N  -36.213  34.942  -22.478  -5.232  -1.394  -0.173  HANA  RLT  51  
RLT  HNAR  HNAR  H  0  0  N  N  N  -36.493  32.892  -21.668  -2.703  -0.148  -0.019  HNAR  RLT  52  
RLT  HNAS  HNAS  H  0  0  N  N  N  -37.514  26.803  -22.205   2.799  -0.354  -0.430  HNAS  RLT  53  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RLT  CAA  CAW   SING  N  N   1  
RLT  CAB  NBE   SING  N  N   2  
RLT  CAC  CBF   SING  N  N   3  
RLT  CAD  CBF   SING  N  N   4  
RLT  OAE  CAU   DOUB  N  N   5  
RLT  OAF  CAV   DOUB  N  N   6  
RLT  OAG  CBD   DOUB  N  N   7  
RLT  OAH  CAZ   SING  N  N   8  
RLT  FAI  CAX   SING  N  N   9  
RLT  CAJ  CAL   DOUB  Y  N  10  
RLT  CAJ  CAX   SING  Y  N  11  
RLT  CAK  CAM   SING  Y  N  12  
RLT  CAK  CAX   DOUB  Y  N  13  
RLT  CAL  CAY   SING  Y  N  14  
RLT  CAM  CAY   DOUB  Y  N  15  
RLT  CAN  NAR   SING  N  N  16  
RLT  CAN  CAY   SING  N  N  17  
RLT  NAO  NAP   SING  Y  N  18  
RLT  NAO  CAW   DOUB  Y  N  19  
RLT  NAP  CBA   DOUB  Y  N  20  
RLT  NAQ  CBB   SING  N  N  21  
RLT  NAQ  CBC   DOUB  N  N  22  
RLT  NAR  CAU   SING  N  N  23  
RLT  NAS  CAV   SING  N  N  24  
RLT  NAS  CBF   SING  N  N  25  
RLT  OAT  CAW   SING  Y  N  26  
RLT  OAT  CBA   SING  Y  N  27  
RLT  CAU  CBB   SING  N  N  28  
RLT  CAV  CBA   SING  N  N  29  
RLT  CAZ  CBB   DOUB  N  N  30  
RLT  CAZ  CBD   SING  N  N  31  
RLT  CBC  NBE   SING  N  N  32  
RLT  CBC  CBF   SING  N  N  33  
RLT  CBD  NBE   SING  N  N  34  
RLT  CAA  HAA   SING  N  N  35  
RLT  CAA  HAAA  SING  N  N  36  
RLT  CAA  HAAB  SING  N  N  37  
RLT  CAB  HAB   SING  N  N  38  
RLT  CAB  HABA  SING  N  N  39  
RLT  CAB  HABB  SING  N  N  40  
RLT  CAC  HAC   SING  N  N  41  
RLT  CAC  HACA  SING  N  N  42  
RLT  CAC  HACB  SING  N  N  43  
RLT  CAD  HAD   SING  N  N  44  
RLT  CAD  HADA  SING  N  N  45  
RLT  CAD  HADB  SING  N  N  46  
RLT  OAH  HOAH  SING  N  N  47  
RLT  CAJ  HAJ   SING  N  N  48  
RLT  CAK  HAK   SING  N  N  49  
RLT  CAL  HAL   SING  N  N  50  
RLT  CAM  HAM   SING  N  N  51  
RLT  CAN  HAN   SING  N  N  52  
RLT  CAN  HANA  SING  N  N  53  
RLT  NAR  HNAR  SING  N  N  54  
RLT  NAS  HNAS  SING  N  N  55  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RLT  SMILES_CANONICAL  CACTVS                3.352  "CN1C(=O)C(=C(N=C1C(C)(C)NC(=O)c2oc(C)nn2)C(=O)NCc3ccc(F)cc3)O"  
RLT  SMILES            CACTVS                3.352  "CN1C(=O)C(=C(N=C1C(C)(C)NC(=O)c2oc(C)nn2)C(=O)NCc3ccc(F)cc3)O"  
RLT  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "Cc1nnc(o1)C(=O)NC(C)(C)C2=NC(=C(C(=O)N2C)O)C(=O)NCc3ccc(cc3)F"  
RLT  SMILES            "OpenEye OEToolkits"  1.7.0  "Cc1nnc(o1)C(=O)NC(C)(C)C2=NC(=C(C(=O)N2C)O)C(=O)NCc3ccc(cc3)F"  
RLT  InChI             InChI                 1.03   "InChI=1S/C20H21FN6O5/c1-10-25-26-17(32-10)16(30)24-20(2,3)19-23-13(14(28)18(31)27(19)4)15(29)22-9-11-5-7-12(21)8-6-11/h5-8,28H,9H2,1-4H3,(H,22,29)(H,24,30)"  
RLT  InChIKey          InChI                 1.03   CZFFBEXEKNGXKS-UHFFFAOYSA-N  
#
_pdbx_chem_comp_identifier.comp_id          RLT
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  1.6.1
_pdbx_chem_comp_identifier.identifier       "N-[2-[4-[(4-fluorophenyl)methylcarbamoyl]-5-hydroxy-1-methyl-6-oxo-pyrimidin-2-yl]propan-2-yl]-5-methyl-1,3,4-oxadiazole-2-carboxamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RLT  "Create component"      2009-12-28  PDBJ  
RLT  "Modify aromatic_flag"  2011-06-04  RCSB  
RLT  "Modify descriptor"     2011-06-04  RCSB  
RLT  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     RLT
_pdbx_chem_comp_synonyms.name        "RALTEGRAVIR, MK0518"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
