data_JRT
#

_chem_comp.id                                   JRT
_chem_comp.name                                 "2-(benzimidazol-1-yl)-~{N}-(2-phenylethyl)ethanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H17 N3 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-22
_chem_comp.pdbx_modified_date                   2019-05-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       279.336
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JRT
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6R4A
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JRT  N1   N1   N  0  1  Y  N  N  -13.166  13.502  -21.753  -2.778   1.039   0.366  N1   JRT   1  
JRT  N3   N2   N  0  1  N  N  N  -10.901  11.507  -19.669   0.848   0.797   1.005  N3   JRT   2  
JRT  C4   C1   C  0  1  Y  N  N  -14.491  15.261  -22.012  -4.569   0.197  -0.651  C4   JRT   3  
JRT  C5   C2   C  0  1  Y  N  N  -13.211  14.878  -21.615  -3.532  -0.112   0.246  C5   JRT   4  
JRT  C6   C3   C  0  1  Y  N  N  -12.268  15.799  -21.181  -3.451  -1.382   0.799  C6   JRT   5  
JRT  C7   C4   C  0  1  Y  N  N  -12.641  17.122  -21.155  -4.391  -2.334   0.463  C7   JRT   6  
JRT  C8   C5   C  0  1  Y  N  N  -13.917  17.524  -21.553  -5.415  -2.029  -0.423  C8   JRT   7  
JRT  C10  C6   C  0  1  N  N  N   -9.581  11.981  -19.276   2.026   0.334   0.267  C10  JRT   8  
JRT  C13  C7   C  0  1  Y  N  N  -11.439  13.787  -16.854   4.889  -1.281   0.473  C13  JRT   9  
JRT  C15  C8   C  0  1  Y  N  N  -11.828  16.102  -17.301   6.704  -0.839  -1.024  C15  JRT  10  
JRT  C17  C9   C  0  1  Y  N  N   -9.963  14.988  -18.294   5.193   0.918  -0.422  C17  JRT  11  
JRT  O1   O1   O  0  1  N  N  N  -12.860  12.529  -19.202  -0.495   0.294  -0.687  O1   JRT  12  
JRT  C1   C10  C  0  1  N  N  N  -11.963  12.251  -19.991  -0.372   0.734   0.436  C1   JRT  13  
JRT  C2   C11  C  0  1  N  N  N  -12.025  12.666  -21.457  -1.583   1.211   1.196  C2   JRT  14  
JRT  C3   C12  C  0  1  Y  N  N  -14.388  13.122  -22.220  -3.348   1.981  -0.433  C3   JRT  15  
JRT  N2   N3   N  0  1  Y  N  N  -15.209  14.129  -22.391  -4.393   1.488  -1.031  N2   JRT  16  
JRT  C9   C13  C  0  1  Y  N  N  -14.852  16.607  -21.984  -5.510  -0.784  -0.976  C9   JRT  17  
JRT  C11  C14  C  0  1  N  N  N   -9.493  12.556  -17.875   3.274   0.514   1.133  C11  JRT  18  
JRT  C12  C15  C  0  1  Y  N  N  -10.321  13.802  -17.674   4.485   0.037   0.374  C12  JRT  19  
JRT  C14  C16  C  0  1  Y  N  N  -12.188  14.934  -16.670   5.999  -1.719  -0.224  C14  JRT  20  
JRT  C16  C17  C  0  1  Y  N  N  -10.718  16.130  -18.113   6.298   0.478  -1.127  C16  JRT  21  
JRT  H8   H1   H  0  1  N  N  N  -11.026  10.515  -19.701   0.947   1.150   1.904  H8   JRT  22  
JRT  H4   H2   H  0  1  N  N  N  -11.280  15.489  -20.876  -2.656  -1.625   1.488  H4   JRT  23  
JRT  H5   H3   H  0  1  N  N  N  -11.933  17.865  -20.820  -4.330  -3.323   0.892  H5   JRT  24  
JRT  H6   H4   H  0  1  N  N  N  -14.177  18.572  -21.523  -6.143  -2.784  -0.677  H6   JRT  25  
JRT  H9   H5   H  0  1  N  N  N   -8.882  11.134  -19.341   1.906  -0.720   0.017  H9   JRT  26  
JRT  H10  H6   H  0  1  N  N  N   -9.275  12.764  -19.985   2.132   0.915  -0.649  H10  JRT  27  
JRT  H13  H7   H  0  1  N  N  N  -11.727  12.873  -16.356   4.338  -1.969   1.099  H13  JRT  28  
JRT  H15  H8   H  0  1  N  N  N  -12.416  16.996  -17.159   7.572  -1.181  -1.568  H15  JRT  29  
JRT  H17  H9   H  0  1  N  N  N   -9.086  15.020  -18.924   4.876   1.947  -0.503  H17  JRT  30  
JRT  H2   H10  H  0  1  N  N  N  -12.083  11.759  -22.077  -1.463   2.265   1.446  H2   JRT  31  
JRT  H1   H11  H  0  1  N  N  N  -11.108  13.221  -21.704  -1.689   0.630   2.112  H1   JRT  32  
JRT  H3   H12  H  0  1  N  N  N  -14.653  12.096  -22.428  -2.985   2.991  -0.553  H3   JRT  33  
JRT  H7   H13  H  0  1  N  N  N  -15.838  16.923  -22.292  -6.311  -0.557  -1.664  H7   JRT  34  
JRT  H11  H14  H  0  1  N  N  N   -9.839  11.791  -17.164   3.394   1.568   1.384  H11  JRT  35  
JRT  H12  H15  H  0  1  N  N  N   -8.441  12.801  -17.666   3.168  -0.067   2.049  H12  JRT  36  
JRT  H14  H16  H  0  1  N  N  N  -13.057  14.913  -16.030   6.317  -2.748  -0.143  H14  JRT  37  
JRT  H16  H17  H  0  1  N  N  N  -10.437  17.047  -18.610   6.851   1.167  -1.749  H16  JRT  38  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JRT  N2   C3   DOUB  Y  N   1  
JRT  N2   C4   SING  Y  N   2  
JRT  C3   N1   SING  Y  N   3  
JRT  C4   C9   DOUB  Y  N   4  
JRT  C4   C5   SING  Y  N   5  
JRT  C9   C8   SING  Y  N   6  
JRT  N1   C5   SING  Y  N   7  
JRT  N1   C2   SING  N  N   8  
JRT  C5   C6   DOUB  Y  N   9  
JRT  C8   C7   DOUB  Y  N  10  
JRT  C2   C1   SING  N  N  11  
JRT  C6   C7   SING  Y  N  12  
JRT  C1   N3   SING  N  N  13  
JRT  C1   O1   DOUB  N  N  14  
JRT  N3   C10  SING  N  N  15  
JRT  C10  C11  SING  N  N  16  
JRT  C17  C16  DOUB  Y  N  17  
JRT  C17  C12  SING  Y  N  18  
JRT  C16  C15  SING  Y  N  19  
JRT  C11  C12  SING  N  N  20  
JRT  C12  C13  DOUB  Y  N  21  
JRT  C15  C14  DOUB  Y  N  22  
JRT  C13  C14  SING  Y  N  23  
JRT  N3   H8   SING  N  N  24  
JRT  C6   H4   SING  N  N  25  
JRT  C7   H5   SING  N  N  26  
JRT  C8   H6   SING  N  N  27  
JRT  C10  H9   SING  N  N  28  
JRT  C10  H10  SING  N  N  29  
JRT  C13  H13  SING  N  N  30  
JRT  C15  H15  SING  N  N  31  
JRT  C17  H17  SING  N  N  32  
JRT  C2   H2   SING  N  N  33  
JRT  C2   H1   SING  N  N  34  
JRT  C3   H3   SING  N  N  35  
JRT  C9   H7   SING  N  N  36  
JRT  C11  H11  SING  N  N  37  
JRT  C11  H12  SING  N  N  38  
JRT  C14  H14  SING  N  N  39  
JRT  C16  H16  SING  N  N  40  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JRT  InChI             InChI                 1.03   "InChI=1S/C17H17N3O/c21-17(18-11-10-14-6-2-1-3-7-14)12-20-13-19-15-8-4-5-9-16(15)20/h1-9,13H,10-12H2,(H,18,21)"  
JRT  InChIKey          InChI                 1.03   CAHHWKPTYNNMOV-UHFFFAOYSA-N  
JRT  SMILES_CANONICAL  CACTVS                3.385  "O=C(Cn1cnc2ccccc12)NCCc3ccccc3"  
JRT  SMILES            CACTVS                3.385  "O=C(Cn1cnc2ccccc12)NCCc3ccccc3"  
JRT  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)CCNC(=O)Cn2cnc3c2cccc3"  
JRT  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)CCNC(=O)Cn2cnc3c2cccc3"  
#
_pdbx_chem_comp_identifier.comp_id          JRT
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "2-(benzimidazol-1-yl)-~{N}-(2-phenylethyl)ethanamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JRT  "Create component"  2019-03-22  RCSB  
JRT  "Initial release"   2019-05-08  RCSB  
##
