data_GCT
#

_chem_comp.id                                   GCT
_chem_comp.name                                 "2,6-anhydro-3-deoxy-L-xylo-hexonic acid"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H10 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "4,5-DIHYDROXY-TETRAHYDRO-PYRAN-2-CARBOXYLIC ACID"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-01-06
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       162.141
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GCT
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1RWF
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     GCT
_pdbx_chem_comp_synonyms.name        "4,5-DIHYDROXY-TETRAHYDRO-PYRAN-2-CARBOXYLIC ACID"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GCT  C1    C1    C  0  1  N  N  N   2.957  44.864  77.843   1.559  -0.304   0.921  C1    GCT   1  
GCT  C2    C2    C  0  1  N  N  S   2.628  44.120  79.132   0.482   0.248   1.856  C2    GCT   2  
GCT  O2    O2    O  0  1  N  N  N   3.879  43.903  79.713   0.709  -0.231   3.183  O2    GCT   3  
GCT  C3    C3    C  0  1  N  N  S   2.041  42.781  78.756  -0.893  -0.222   1.370  C3    GCT   4  
GCT  O3    O3    O  0  1  N  N  N   1.780  41.939  79.868  -1.921   0.405   2.139  O3    GCT   5  
GCT  C4    C4    C  0  1  N  N  N   0.727  43.108  78.044  -1.048   0.161  -0.106  C4    GCT   6  
GCT  C5    C5    C  0  1  N  N  S   0.768  44.170  76.939   0.144  -0.384  -0.893  C5    GCT   7  
GCT  C6    C6    C  0  1  N  N  N  -0.344  45.221  77.011  -0.017  -0.038  -2.350  C6    GCT   8  
GCT  O6A   O6A   O  0  1  N  N  N  -0.160  46.375  76.521   0.818   0.633  -2.908  O6A   GCT   9  
GCT  O6B   O6B   O  0  1  N  N  N  -1.415  44.859  77.543  -1.089  -0.475  -3.029  O6B   GCT  10  
GCT  O5    O5    O  0  1  N  N  N   2.059  44.722  76.755   1.353   0.191  -0.400  O5    GCT  11  
GCT  H1    HC11  H  0  1  N  N  N   3.094  45.947  78.068   2.542   0.007   1.275  H1    GCT  12  
GCT  HC12  HC12  H  0  0  N  N  N   3.984  44.587  77.510   1.507  -1.393   0.912  HC12  GCT  13  
GCT  H2    HC2   H  0  1  N  N  N   1.918  44.664  79.798   0.518   1.337   1.851  H2    GCT  14  
GCT  HO2   HO2   H  0  1  N  Y  N   3.673  43.439  80.516   1.584   0.084   3.448  HO2   GCT  15  
GCT  H3    HC3   H  0  1  N  N  N   2.767  42.217  78.125  -0.966  -1.304   1.476  H3    GCT  16  
GCT  HO3   HO3   H  0  1  N  Y  N   1.410  41.096  79.631  -1.785   0.137   3.058  HO3   GCT  17  
GCT  H4    HC41  H  0  1  N  N  N   0.283  42.169  77.637  -1.080   1.247  -0.197  H4    GCT  18  
GCT  HC42  HC42  H  0  0  N  N  N  -0.042  43.391  78.800  -1.971  -0.266  -0.499  HC42  GCT  19  
GCT  H5    HC5   H  0  1  N  N  N   0.535  43.608  76.004   0.187  -1.468  -0.780  H5    GCT  20  
GCT  HO6B  HO6   H  0  0  N  N  N  -2.104  45.510  77.587  -1.193  -0.253  -3.964  HO6B  GCT  21  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GCT  C1   C2    SING  N  N   1  
GCT  C1   O5    SING  N  N   2  
GCT  C1   H1    SING  N  N   3  
GCT  C1   HC12  SING  N  N   4  
GCT  C2   O2    SING  N  N   5  
GCT  C2   C3    SING  N  N   6  
GCT  C2   H2    SING  N  N   7  
GCT  O2   HO2   SING  N  N   8  
GCT  C3   O3    SING  N  N   9  
GCT  C3   C4    SING  N  N  10  
GCT  C3   H3    SING  N  N  11  
GCT  O3   HO3   SING  N  N  12  
GCT  C4   C5    SING  N  N  13  
GCT  C4   H4    SING  N  N  14  
GCT  C4   HC42  SING  N  N  15  
GCT  C5   C6    SING  N  N  16  
GCT  C5   O5    SING  N  N  17  
GCT  C5   H5    SING  N  N  18  
GCT  C6   O6A   DOUB  N  N  19  
GCT  C6   O6B   SING  N  N  20  
GCT  O6B  HO6B  SING  N  N  21  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GCT  SMILES            ACDLabs               10.04  "O=C(O)C1OCC(O)C(O)C1"  
GCT  SMILES_CANONICAL  CACTVS                3.341  "O[C@H]1CO[C@@H](C[C@@H]1O)C(O)=O"  
GCT  SMILES            CACTVS                3.341  "O[CH]1CO[CH](C[CH]1O)C(O)=O"  
GCT  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C1[C@@H]([C@H](CO[C@@H]1C(=O)O)O)O"  
GCT  SMILES            "OpenEye OEToolkits"  1.5.0  "C1C(C(COC1C(=O)O)O)O"  
GCT  InChI             InChI                 1.03   "InChI=1S/C6H10O5/c7-3-1-5(6(9)10)11-2-4(3)8/h3-5,7-8H,1-2H2,(H,9,10)/t3-,4-,5-/m0/s1"  
GCT  InChIKey          InChI                 1.03   YRPRHLNMFWDGSL-YUPRTTJUSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GCT  "SYSTEMATIC NAME"            ACDLabs               10.04  "2,6-anhydro-3-deoxy-L-xylo-hexonic acid"  
GCT  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.5.0  "(2S,4S,5S)-4,5-dihydroxyoxane-2-carboxylic acid"  
GCT  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    "D-1,4-deoxy-GlcpA"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
GCT  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
GCT  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
GCT  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GCT  "Create component"          2004-01-06  RCSB  
GCT  "Modify descriptor"         2011-06-04  RCSB  
GCT  "Other modification"        2020-07-03  RCSB  
GCT  "Modify name"               2020-07-17  RCSB  
GCT  "Modify synonyms"           2020-07-17  RCSB  
GCT  "Modify linking type"       2020-07-17  RCSB  
GCT  "Modify atom id"            2020-07-17  RCSB  
GCT  "Modify component atom id"  2020-07-17  RCSB  
GCT  "Modify leaving atom flag"  2020-07-17  RCSB  
##
