data_6AT
#

_chem_comp.id                                   6AT
_chem_comp.name                                 "2-(methylsulfanyl)adenosine 5'-(tetrahydrogen triphosphate)"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H18 N5 O13 P3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "2-methylthio-adenosine-5'-triphosphate"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-04-01
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       553.273
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    6AT
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4PY0
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6AT  OAI    OAI    O  0  1  N  N  N  -15.253   -8.614  18.681   7.284  -3.312  -0.153  OAI    6AT   1  
6AT  PBE    PBE    P  0  1  N  N  N  -15.967   -7.455  17.805   7.209  -1.925  -0.968  PBE    6AT   2  
6AT  OAH    OAH    O  0  1  N  N  N  -17.415   -7.741  17.788   8.290  -1.024  -0.510  OAH    6AT   3  
6AT  OAC    OAC    O  0  1  N  N  N  -15.478   -6.136  18.276   7.384  -2.216  -2.542  OAC    6AT   4  
6AT  OAS    OAS    O  0  1  N  N  N  -15.417   -7.693  16.309   5.782  -1.227  -0.707  OAS    6AT   5  
6AT  PBG    PBG    P  0  1  N  N  N  -16.009   -6.797  15.110   5.172  -0.343   0.493  PBG    6AT   6  
6AT  OAK    OAK    O  0  1  N  N  N  -14.889   -6.804  13.966   6.161   0.678   0.906  OAK    6AT   7  
6AT  OAE    OAE    O  0  1  N  N  N  -16.323   -5.412  15.525   4.831  -1.298   1.743  OAE    6AT   8  
6AT  OAT    OAT    O  0  1  N  N  N  -17.328   -7.568  14.565   3.826   0.386  -0.008  OAT    6AT   9  
6AT  PBF    PBF    P  0  1  N  N  N  -17.329   -8.890  13.622   2.989   1.663   0.503  PBF    6AT  10  
6AT  OAJ    OAJ    O  0  1  N  N  N  -17.621  -10.136  14.592   3.695   3.012  -0.020  OAJ    6AT  11  
6AT  OAD    OAD    O  0  1  N  N  N  -16.099   -9.083  12.828   2.951   1.668   1.982  OAD    6AT  12  
6AT  "O5'"  "O5'"  O  0  1  N  N  N  -18.623   -8.793  12.662   1.487   1.585  -0.072  "O5'"  6AT  13  
6AT  "C5'"  "C5'"  C  0  1  N  N  N  -19.741   -7.948  12.961   0.467   2.519   0.287  "C5'"  6AT  14  
6AT  "C4'"  "C4'"  C  0  1  N  N  R  -21.026   -8.528  12.351  -0.833   2.157  -0.435  "C4'"  6AT  15  
6AT  "O4'"  "O4'"  O  0  1  N  N  N  -20.801   -9.226  11.098  -1.379   0.931   0.098  "O4'"  6AT  16  
6AT  "C3'"  "C3'"  C  0  1  N  N  S  -21.699   -9.490  13.314  -1.916   3.224  -0.160  "C3'"  6AT  17  
6AT  "O3'"  "O3'"  O  0  1  N  N  N  -23.119   -9.237  13.328  -1.994   4.149  -1.246  "O3'"  6AT  18  
6AT  "C2'"  "C2'"  C  0  1  N  N  R  -21.387  -10.852  12.729  -3.224   2.410  -0.046  "C2'"  6AT  19  
6AT  "O2'"  "O2'"  O  0  1  N  N  N  -22.443  -11.789  12.972  -4.151   2.807  -1.058  "O2'"  6AT  20  
6AT  "C1'"  "C1'"  C  0  1  N  N  R  -21.232  -10.599  11.235  -2.777   0.948  -0.265  "C1'"  6AT  21  
6AT  N9     N9     N  0  1  Y  N  N  -20.192  -11.473  10.602  -3.540   0.045   0.601  N9     6AT  22  
6AT  C8     C8     C  0  1  Y  N  N  -18.988  -11.769  11.094  -3.184  -0.365   1.853  C8     6AT  23  
6AT  N7     N7     N  0  1  Y  N  N  -18.361  -12.556  10.229  -4.092  -1.163   2.333  N7     6AT  24  
6AT  C5     C5     C  0  1  Y  N  N  -19.159  -12.727   9.178  -5.086  -1.315   1.424  C5     6AT  25  
6AT  C4     C4     C  0  1  Y  N  N  -20.294  -12.051   9.404  -4.746  -0.537   0.305  C4     6AT  26  
6AT  N3     N3     N  0  1  Y  N  N  -21.281  -12.058   8.479  -5.567  -0.513  -0.741  N3     6AT  27  
6AT  C2     C2     C  0  1  Y  N  N  -21.138  -12.750   7.331  -6.691  -1.212  -0.731  C2     6AT  28  
6AT  S2     S2     S  0  1  N  N  N  -22.466  -12.737   6.137  -7.745  -1.147  -2.141  S2     6AT  29  
6AT  CAA    CAA    C  0  1  N  N  N  -21.719  -13.469   4.692  -9.074  -2.247  -1.590  CAA    6AT  30  
6AT  N1     N1     N  0  1  Y  N  N  -19.990  -13.427   7.109  -7.050  -1.960   0.305  N1     6AT  31  
6AT  C6     C6     C  0  1  Y  N  N  -19.014  -13.412   8.036  -6.294  -2.034   1.394  C6     6AT  32  
6AT  N6     N6     N  0  1  N  N  N  -17.866  -14.067   7.861  -6.677  -2.817   2.469  N6     6AT  33  
6AT  H1     H1     H  0  1  N  N  N  -15.910   -9.225  18.994   6.604  -3.952  -0.403  H1     6AT  34  
6AT  H2     H2     H  0  1  N  N  N  -16.217   -5.595  18.529   8.223  -2.638  -2.772  H2     6AT  35  
6AT  H3     H3     H  0  1  N  N  N  -15.792   -4.803  15.025   4.188  -1.992   1.544  H3     6AT  36  
6AT  H4     H4     H  0  1  N  N  N  -16.940  -10.789  14.483   3.754   3.076  -0.983  H4     6AT  37  
6AT  H5     H5     H  0  1  N  N  N  -19.561   -6.947  12.543   0.306   2.484   1.365  H5     6AT  38  
6AT  H6     H6     H  0  1  N  N  N  -19.859   -7.874  14.052   0.775   3.523  -0.002  H6     6AT  39  
6AT  H7     H7     H  0  1  N  N  N  -21.717   -7.692  12.171  -0.657   2.062  -1.506  H7     6AT  40  
6AT  H8     H8     H  0  1  N  N  N  -21.262   -9.394  14.319  -1.707   3.748   0.773  H8     6AT  41  
6AT  H9     H9     H  0  1  N  N  N  -23.542   -9.838  13.930  -2.659   4.841  -1.126  H9     6AT  42  
6AT  H10    H10    H  0  1  N  N  N  -20.436  -11.221  13.140  -3.665   2.532   0.943  H10    6AT  43  
6AT  H11    H11    H  0  1  N  N  N  -22.527  -11.936  13.907  -4.419   3.735  -1.004  H11    6AT  44  
6AT  H12    H12    H  0  1  N  N  N  -22.200  -10.751  10.735  -2.901   0.666  -1.311  H12    6AT  45  
6AT  H13    H13    H  0  1  N  N  N  -18.590  -11.426  12.038  -2.281  -0.072   2.368  H13    6AT  46  
6AT  H14    H14    H  0  1  N  N  N  -22.458  -13.513   3.879  -9.832  -2.319  -2.370  H14    6AT  47  
6AT  H15    H15    H  0  1  N  N  N  -20.860  -12.859   4.374  -8.665  -3.237  -1.387  H15    6AT  48  
6AT  H16    H16    H  0  1  N  N  N  -21.377  -14.487   4.932  -9.524  -1.846  -0.682  H16    6AT  49  
6AT  H17    H17    H  0  1  N  N  N  -17.878  -14.532   6.976  -7.506  -3.319   2.432  H17    6AT  50  
6AT  H18    H18    H  0  1  N  N  N  -17.105  -13.419   7.886  -6.116  -2.863   3.259  H18    6AT  51  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6AT  CAA    S2     SING  N  N   1  
6AT  S2     C2     SING  N  N   2  
6AT  N1     C2     DOUB  Y  N   3  
6AT  N1     C6     SING  Y  N   4  
6AT  C2     N3     SING  Y  N   5  
6AT  N6     C6     SING  N  N   6  
6AT  C6     C5     DOUB  Y  N   7  
6AT  N3     C4     DOUB  Y  N   8  
6AT  C5     C4     SING  Y  N   9  
6AT  C5     N7     SING  Y  N  10  
6AT  C4     N9     SING  Y  N  11  
6AT  N7     C8     DOUB  Y  N  12  
6AT  N9     C8     SING  Y  N  13  
6AT  N9     "C1'"  SING  N  N  14  
6AT  "O4'"  "C1'"  SING  N  N  15  
6AT  "O4'"  "C4'"  SING  N  N  16  
6AT  "C1'"  "C2'"  SING  N  N  17  
6AT  "C4'"  "C5'"  SING  N  N  18  
6AT  "C4'"  "C3'"  SING  N  N  19  
6AT  "O5'"  "C5'"  SING  N  N  20  
6AT  "O5'"  PBF    SING  N  N  21  
6AT  "C2'"  "O2'"  SING  N  N  22  
6AT  "C2'"  "C3'"  SING  N  N  23  
6AT  OAD    PBF    DOUB  N  N  24  
6AT  "C3'"  "O3'"  SING  N  N  25  
6AT  PBF    OAT    SING  N  N  26  
6AT  PBF    OAJ    SING  N  N  27  
6AT  OAK    PBG    DOUB  N  N  28  
6AT  OAT    PBG    SING  N  N  29  
6AT  PBG    OAE    SING  N  N  30  
6AT  PBG    OAS    SING  N  N  31  
6AT  OAS    PBE    SING  N  N  32  
6AT  OAH    PBE    DOUB  N  N  33  
6AT  PBE    OAC    SING  N  N  34  
6AT  PBE    OAI    SING  N  N  35  
6AT  OAI    H1     SING  N  N  36  
6AT  OAC    H2     SING  N  N  37  
6AT  OAE    H3     SING  N  N  38  
6AT  OAJ    H4     SING  N  N  39  
6AT  "C5'"  H5     SING  N  N  40  
6AT  "C5'"  H6     SING  N  N  41  
6AT  "C4'"  H7     SING  N  N  42  
6AT  "C3'"  H8     SING  N  N  43  
6AT  "O3'"  H9     SING  N  N  44  
6AT  "C2'"  H10    SING  N  N  45  
6AT  "O2'"  H11    SING  N  N  46  
6AT  "C1'"  H12    SING  N  N  47  
6AT  C8     H13    SING  N  N  48  
6AT  CAA    H14    SING  N  N  49  
6AT  CAA    H15    SING  N  N  50  
6AT  CAA    H16    SING  N  N  51  
6AT  N6     H17    SING  N  N  52  
6AT  N6     H18    SING  N  N  53  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6AT  SMILES            ACDLabs               12.01  "O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(nc(SC)nc12)N)C(O)C3O"  
6AT  InChI             InChI                 1.03   "InChI=1S/C11H18N5O13P3S/c1-33-11-14-8(12)5-9(15-11)16(3-13-5)10-7(18)6(17)4(27-10)2-26-31(22,23)29-32(24,25)28-30(19,20)21/h3-4,6-7,10,17-18H,2H2,1H3,(H,22,23)(H,24,25)(H2,12,14,15)(H2,19,20,21)/t4-,6-,7-,10-/m1/s1"  
6AT  InChIKey          InChI                 1.03   XNOBOKJVOTYSJV-KQYNXXCUSA-N  
6AT  SMILES_CANONICAL  CACTVS                3.385  "CSc1nc(N)c2ncn([C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O)c2n1"  
6AT  SMILES            CACTVS                3.385  "CSc1nc(N)c2ncn([CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O)c2n1"  
6AT  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CSc1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N"  
6AT  SMILES            "OpenEye OEToolkits"  1.7.6  "CSc1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
6AT  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-(methylsulfanyl)adenosine 5'-(tetrahydrogen triphosphate)"  
6AT  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "[[(2R,3S,4R,5R)-5-(6-azanyl-2-methylsulfanyl-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6AT  "Create component"  2014-04-01  PDBJ  
6AT  "Initial release"   2014-04-30  RCSB  
6AT  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     6AT
_pdbx_chem_comp_synonyms.name        "2-methylthio-adenosine-5'-triphosphate"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
