data_3LT
# 
_chem_comp.id                                    3LT 
_chem_comp.name                                  "(4R)-4-[[(2S)-2-[[(2R)-2-[(2R,3S,4R,5R,6R)-5-acetamido-2-(hydroxymethyl)-3,6-bis(oxidanyl)oxan-4-yl]oxypropanoyl]amino]propanoyl]amino]-5-azanyl-5-oxidanylidene-pentanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H32 N4 O11" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-09-19 
_chem_comp.pdbx_modified_date                    2015-10-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        492.478 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3LT 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4PI9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3LT CAA C1  C 0 1 N N R -0.969 5.073  -9.438  5.413  1.335  0.353  CAA 3LT 1  
3LT CAJ C2  C 0 1 N N R -2.053 4.784  -10.510 4.104  0.792  -0.226 CAJ 3LT 2  
3LT CAI C3  C 0 1 N N R -1.692 5.644  -11.768 3.922  -0.663 0.218  CAI 3LT 3  
3LT CAG C4  C 0 1 N N S -1.638 7.127  -11.361 5.139  -1.477 -0.232 CAG 3LT 4  
3LT CAD C5  C 0 1 N N R -0.680 7.310  -10.157 6.408  -0.847 0.347  CAD 3LT 5  
3LT CAE C6  C 0 1 N N N -0.555 8.762  -9.633  7.633  -1.620 -0.147 CAE 3LT 6  
3LT CAL C7  C 0 1 N N N -3.047 2.554  -11.013 2.567  2.671  -0.440 CAL 3LT 7  
3LT CAN C8  C 0 1 N N N -2.774 1.164  -11.511 1.413  3.500  0.062  CAN 3LT 8  
3LT CAP C9  C 0 1 N N R -2.366 4.541  -13.792 1.603  -1.203 0.488  CAP 3LT 9  
3LT CAR C10 C 0 1 N N N -3.583 3.788  -14.235 0.346  -1.072 -0.333 CAR 3LT 10 
3LT CAQ C11 C 0 1 N N N -1.686 5.211  -15.002 1.564  -2.515 1.274  CAQ 3LT 11 
3LT OAB O1  O 0 1 N N N -1.194 4.238  -8.365  5.617  2.674  -0.103 OAB 3LT 12 
3LT OAO O2  O 0 1 N N N -2.648 5.504  -12.790 2.740  -1.200 -0.378 OAO 3LT 13 
3LT OAH O3  O 0 1 N N N -1.158 7.887  -12.497 5.015  -2.821 0.239  OAH 3LT 14 
3LT OAC O4  O 0 1 N N N -1.105 6.461  -9.062  6.500  0.514  -0.079 OAC 3LT 15 
3LT OAF O5  O 0 1 N N N -1.954 9.184  -9.547  8.807  -1.106 0.484  OAF 3LT 16 
3LT OAM O6  O 0 1 N N N -4.202 2.910  -10.821 3.122  2.970  -1.476 OAM 3LT 17 
3LT OAS O7  O 0 1 N N N -3.461 2.778  -14.920 0.410  -1.076 -1.545 OAS 3LT 18 
3LT NAK N1  N 0 1 N N N -1.996 3.366  -10.905 2.982  1.598  0.262  NAK 3LT 19 
3LT NAT N2  N 0 1 N N N -4.776 4.253  -13.830 -0.849 -0.950 0.278  NAT 3LT 20 
3LT CAU C12 C 0 1 N N S -6.031 3.518  -14.151 -2.070 -0.822 -0.520 CAU 3LT 21 
3LT CAW C13 C 0 1 N N N -6.925 4.051  -15.294 -3.126 -0.112 0.287  CAW 3LT 22 
3LT CAV C14 C 0 1 N N N -6.844 3.382  -12.842 -2.575 -2.214 -0.907 CAV 3LT 23 
3LT OAX O8  O 0 1 N N N -7.128 3.004  -16.251 -2.882 0.253  1.418  OAX 3LT 24 
3LT C   C15 C 0 1 N N N -8.517 6.545  -16.183 -5.185 2.300  0.402  C   3LT 25 
3LT N   N3  N 0 1 N N N -6.377 5.239  -15.982 -4.341 0.119  -0.248 N   3LT 26 
3LT O   O9  O 0 1 N N N -9.242 7.485  -15.863 -4.286 2.741  -0.282 O   3LT 27 
3LT NBH N4  N 0 1 N N N -8.893 5.651  -17.110 -6.020 3.142  1.042  NBH 3LT 28 
3LT CA  C16 C 0 1 N N R -7.086 6.436  -15.550 -5.368 0.811  0.537  CA  3LT 29 
3LT CB  C17 C 0 1 N N N -7.101 6.525  -13.983 -6.754 0.418  0.022  CB  3LT 30 
3LT CD  C18 C 0 1 N N N -5.735 7.404  -12.030 -8.353 -1.459 -0.235 CD  3LT 31 
3LT CG  C19 C 0 1 N N N -6.116 7.595  -13.509 -6.988 -1.073 0.273  CG  3LT 32 
3LT OE2 O10 O 0 1 N N N -5.666 6.276  -11.487 -9.066 -0.628 -0.745 OE2 3LT 33 
3LT OE1 O11 O 0 1 N N N -5.557 8.478  -11.406 -8.778 -2.728 -0.120 OE1 3LT 34 
3LT H1  H1  H 0 1 N N N 0.022  4.895  -9.880  5.361  1.325  1.442  H1  3LT 35 
3LT H2  H2  H 0 1 N N N -3.049 5.060  -10.133 4.140  0.839  -1.314 H2  3LT 36 
3LT H3  H3  H 0 1 N N N -0.697 5.338  -12.124 3.837  -0.705 1.304  H3  3LT 37 
3LT H4  H4  H 0 1 N N N -2.646 7.461  -11.073 5.195  -1.476 -1.321 H4  3LT 38 
3LT H5  H5  H 0 1 N N N 0.321  6.990  -10.482 6.369  -0.886 1.436  H5  3LT 39 
3LT H6  H6  H 0 1 N N N -0.069 8.789  -8.646  7.520  -2.676 0.100  H6  3LT 40 
3LT H7  H7  H 0 1 N N N 0.009  9.392  -10.337 7.722  -1.508 -1.228 H7  3LT 41 
3LT H8  H8  H 0 1 N N N -3.725 0.627  -11.641 1.789  4.294  0.706  H8  3LT 42 
3LT H9  H9  H 0 1 N N N -2.249 1.217  -12.476 0.884  3.938  -0.785 H9  3LT 43 
3LT H10 H10 H 0 1 N N N -2.148 0.630  -10.781 0.730  2.866  0.628  H10 3LT 44 
3LT H11 H11 H 0 1 N N N -1.653 3.809  -13.385 1.673  -0.365 1.182  H11 3LT 45 
3LT H12 H12 H 0 1 N N N -0.795 5.760  -14.665 1.412  -3.346 0.586  H12 3LT 46 
3LT H13 H13 H 0 1 N N N -1.389 4.440  -15.728 2.506  -2.649 1.804  H13 3LT 47 
3LT H14 H14 H 0 1 N N N -2.390 5.910  -15.477 0.744  -2.483 1.992  H14 3LT 48 
3LT H15 H15 H 0 1 N N N -0.540 4.399  -7.695  6.430  3.081  0.225  H15 3LT 49 
3LT H16 H16 H 0 1 N N N -1.117 8.808  -12.268 5.752  -3.395 -0.010 H16 3LT 50 
3LT H17 H17 H 0 1 N N N -1.996 10.078 -9.230  9.623  -1.550 0.217  H17 3LT 51 
3LT H18 H18 H 0 1 N N N -1.096 2.982  -11.109 2.537  1.359  1.091  H18 3LT 52 
3LT H19 H19 H 0 1 N N N -4.822 5.104  -13.306 -0.900 -0.947 1.247  H19 3LT 53 
3LT H20 H20 H 0 1 N N N -5.739 2.497  -14.439 -1.857 -0.250 -1.423 H20 3LT 54 
3LT H22 H22 H 0 1 N N N -6.191 3.002  -12.042 -3.484 -2.119 -1.501 H22 3LT 55 
3LT H23 H23 H 0 1 N N N -7.242 4.366  -12.554 -1.811 -2.728 -1.491 H23 3LT 56 
3LT H24 H24 H 0 1 N N N -7.677 2.681  -12.999 -2.789 -2.786 -0.004 H24 3LT 57 
3LT H26 H26 H 0 1 N N N -5.630 5.223  -16.646 -4.537 -0.172 -1.152 H26 3LT 58 
3LT H28 H28 H 0 1 N N N -9.782 5.740  -17.559 -5.903 4.101  0.955  H28 3LT 59 
3LT H29 H29 H 0 1 N N N -8.284 4.895  -17.352 -6.739 2.789  1.589  H29 3LT 60 
3LT H30 H30 H 0 1 N N N -6.520 7.309  -15.907 -5.276 0.526  1.585  H30 3LT 61 
3LT H31 H31 H 0 1 N N N -8.114 6.786  -13.643 -7.514 0.998  0.545  H31 3LT 62 
3LT H32 H32 H 0 1 N N N -6.812 5.551  -13.560 -6.815 0.621  -1.048 H32 3LT 63 
3LT H33 H33 H 0 1 N N N -5.205 7.537  -14.122 -6.228 -1.653 -0.251 H33 3LT 64 
3LT H34 H34 H 0 1 N N N -6.579 8.585  -13.633 -6.927 -1.275 1.342  H34 3LT 65 
3LT H35 H35 H 0 1 N N N -5.370 8.288  -10.494 -9.661 -2.928 -0.460 H35 3LT 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3LT NBH C   SING N N 1  
3LT OAX CAW DOUB N N 2  
3LT C   O   DOUB N N 3  
3LT C   CA  SING N N 4  
3LT N   CA  SING N N 5  
3LT N   CAW SING N N 6  
3LT CA  CB  SING N N 7  
3LT CAW CAU SING N N 8  
3LT CAQ CAP SING N N 9  
3LT OAS CAR DOUB N N 10 
3LT CAR NAT SING N N 11 
3LT CAR CAP SING N N 12 
3LT CAU NAT SING N N 13 
3LT CAU CAV SING N N 14 
3LT CB  CG  SING N N 15 
3LT CAP OAO SING N N 16 
3LT CG  CD  SING N N 17 
3LT OAO CAI SING N N 18 
3LT OAH CAG SING N N 19 
3LT CD  OE2 DOUB N N 20 
3LT CD  OE1 SING N N 21 
3LT CAI CAG SING N N 22 
3LT CAI CAJ SING N N 23 
3LT CAN CAL SING N N 24 
3LT CAG CAD SING N N 25 
3LT CAL NAK SING N N 26 
3LT CAL OAM DOUB N N 27 
3LT NAK CAJ SING N N 28 
3LT CAJ CAA SING N N 29 
3LT CAD CAE SING N N 30 
3LT CAD OAC SING N N 31 
3LT CAE OAF SING N N 32 
3LT CAA OAC SING N N 33 
3LT CAA OAB SING N N 34 
3LT CAA H1  SING N N 35 
3LT CAJ H2  SING N N 36 
3LT CAI H3  SING N N 37 
3LT CAG H4  SING N N 38 
3LT CAD H5  SING N N 39 
3LT CAE H6  SING N N 40 
3LT CAE H7  SING N N 41 
3LT CAN H8  SING N N 42 
3LT CAN H9  SING N N 43 
3LT CAN H10 SING N N 44 
3LT CAP H11 SING N N 45 
3LT CAQ H12 SING N N 46 
3LT CAQ H13 SING N N 47 
3LT CAQ H14 SING N N 48 
3LT OAB H15 SING N N 49 
3LT OAH H16 SING N N 50 
3LT OAF H17 SING N N 51 
3LT NAK H18 SING N N 52 
3LT NAT H19 SING N N 53 
3LT CAU H20 SING N N 54 
3LT CAV H22 SING N N 55 
3LT CAV H23 SING N N 56 
3LT CAV H24 SING N N 57 
3LT N   H26 SING N N 58 
3LT NBH H28 SING N N 59 
3LT NBH H29 SING N N 60 
3LT CA  H30 SING N N 61 
3LT CB  H31 SING N N 62 
3LT CB  H32 SING N N 63 
3LT CG  H33 SING N N 64 
3LT CG  H34 SING N N 65 
3LT OE1 H35 SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3LT SMILES           ACDLabs              12.01 "C1(OC(C(C(C1NC(=O)C)OC(C(NC(C)C(=O)NC(C(=O)N)CCC(=O)O)=O)C)O)CO)O" 
3LT InChI            InChI                1.03  
"InChI=1S/C19H32N4O11/c1-7(17(30)23-10(16(20)29)4-5-12(26)27)21-18(31)8(2)33-15-13(22-9(3)25)19(32)34-11(6-24)14(15)28/h7-8,10-11,13-15,19,24,28,32H,4-6H2,1-3H3,(H2,20,29)(H,21,31)(H,22,25)(H,23,30)(H,26,27)/t7-,8+,10+,11+,13+,14+,15+,19+/m0/s1" 
3LT InChIKey         InChI                1.03  BSOQXXWZTUDTEL-ZUYCGGNHSA-N 
3LT SMILES_CANONICAL CACTVS               3.385 "C[C@H](NC(=O)[C@@H](C)O[C@H]1[C@H](O)[C@@H](CO)O[C@@H](O)[C@@H]1NC(C)=O)C(=O)N[C@H](CCC(O)=O)C(N)=O" 
3LT SMILES           CACTVS               3.385 "C[CH](NC(=O)[CH](C)O[CH]1[CH](O)[CH](CO)O[CH](O)[CH]1NC(C)=O)C(=O)N[CH](CCC(O)=O)C(N)=O" 
3LT SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C[C@@H](C(=O)N[C@H](CCC(=O)O)C(=O)N)NC(=O)[C@@H](C)O[C@@H]1[C@H]([C@@H](O[C@@H]([C@H]1O)CO)O)NC(=O)C" 
3LT SMILES           "OpenEye OEToolkits" 1.9.2 "CC(C(=O)NC(CCC(=O)O)C(=O)N)NC(=O)C(C)OC1C(C(OC(C1O)CO)O)NC(=O)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3LT "SYSTEMATIC NAME" ACDLabs              12.01 "(4R)-4-{[(2S)-2-{[(2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoyl]amino}propanoyl]amino}-5-amino-5-oxopentanoic acid (non-preferred name)" 
3LT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(4R)-4-[[(2S)-2-[[(2R)-2-[(2R,3S,4R,5R,6R)-5-acetamido-2-(hydroxymethyl)-3,6-bis(oxidanyl)oxan-4-yl]oxypropanoyl]amino]propanoyl]amino]-5-azanyl-5-oxidanylidene-pentanoic acid"                           
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3LT "Create component"   2014-09-19 RCSB 
3LT "Other modification" 2015-10-03 RCSB 
3LT "Initial release"    2015-10-14 RCSB 
# 
