data_3KT
#

_chem_comp.id                                   3KT
_chem_comp.name                                 "(2E,5R)-5-(2-cyclohexylethyl)-5-{[(1S,3R)-3-(cyclopentylamino)cyclohexyl]methyl}-2-imino-3-methylimidazolidin-4-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H42 N4 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-09-08
_chem_comp.pdbx_modified_date                   2019-12-08
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       402.616
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    3KT
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4R91
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
3KT  C12  C12  C  0  1  N  N  R  24.989  10.955  20.612   3.196   1.012   0.123  C12  3KT   1  
3KT  C13  C13  C  0  1  N  N  S  22.538  10.510  20.466   1.013   2.128  -0.354  C13  3KT   2  
3KT  C3   C3   C  0  1  N  N  N  21.182  11.820  23.263  -0.633  -0.233   0.454  C3   3KT   3  
3KT  C1   C1   C  0  1  N  N  N  22.018   9.891  24.113  -0.301  -0.619  -1.732  C1   3KT   4  
3KT  C4   C4   C  0  1  N  N  R  20.725  10.692  22.360  -1.186   0.942  -0.324  C4   3KT   5  
3KT  C7   C7   C  0  1  N  N  N  21.133  10.909  20.906  -0.456   2.230   0.063  C7   3KT   6  
3KT  N2   N2   N  0  1  N  N  N  21.881  11.235  24.288  -0.137  -1.094  -0.454  N2   3KT   7  
3KT  C9   C9   C  0  1  N  N  N  19.210  10.551  22.380  -2.689   1.086  -0.077  C9   3KT   8  
3KT  C11  C11  C  0  1  N  N  N  22.581  12.008  25.307   0.497  -2.373  -0.122  C11  3KT   9  
3KT  N5   N5   N  0  1  N  N  N  22.690   9.144  24.919   0.087  -1.246  -2.805  N5   3KT  10  
3KT  N6   N6   N  0  1  N  N  N  21.342   9.523  22.982  -0.926   0.604  -1.732  N6   3KT  11  
3KT  O8   O8   O  0  1  N  N  N  20.909  13.008  23.150  -0.633  -0.370   1.659  O8   3KT  12  
3KT  N10  N10  N  0  1  N  N  N  26.017  11.656  21.463   3.883   0.037   0.981  N10  3KT  13  
3KT  C14  C14  C  0  1  N  N  N  23.626  11.326  21.167   1.728   1.113   0.540  C14  3KT  14  
3KT  C15  C15  C  0  1  N  N  N  18.554  10.624  23.754  -3.392  -0.227  -0.426  C15  3KT  15  
3KT  C16  C16  C  0  1  N  N  N  27.426  11.600  20.971   5.054  -0.531   0.300  C16  3KT  16  
3KT  C17  C17  C  0  1  N  N  N  17.094  10.195  23.748  -4.895  -0.083  -0.180  C17  3KT  17  
3KT  C18  C18  C  0  1  N  N  N  23.994  10.551  18.386   3.149   3.396  -0.623  C18  3KT  18  
3KT  C19  C19  C  0  1  N  N  N  25.062  11.343  19.134   3.864   2.380   0.270  C19  3KT  19  
3KT  C20  C20  C  0  1  N  N  N  22.604  10.802  18.971   1.680   3.497  -0.206  C20  3KT  20  
3KT  C21  C21  C  0  1  N  N  N  27.873  10.146  20.878   4.637  -1.763  -0.530  C21  3KT  21  
3KT  C22  C22  C  0  1  N  N  N  28.262  12.271  22.034   6.078  -1.025   1.336  C22  3KT  22  
3KT  C23  C23  C  0  1  N  N  N  16.186  11.219  23.064  -5.149   0.128   1.314  C23  3KT  23  
3KT  C24  C24  C  0  1  N  N  N  16.651   9.969  25.189  -5.612  -1.351  -0.646  C24  3KT  24  
3KT  C25  C25  C  0  1  N  N  N  15.185   9.551  25.297  -7.115  -1.207  -0.400  C25  3KT  25  
3KT  C26  C26  C  0  1  N  N  N  28.937   9.916  21.919   5.825  -2.745  -0.376  C26  3KT  26  
3KT  C27  C27  C  0  1  N  N  N  29.190  11.229  22.603   6.248  -2.540   1.100  C27  3KT  27  
3KT  C28  C28  C  0  1  N  N  N  14.740  10.732  23.118  -6.652   0.272   1.560  C28  3KT  28  
3KT  C29  C29  C  0  1  N  N  N  14.271  10.509  24.549  -7.370  -0.996   1.094  C29  3KT  29  
3KT  H1   H1   H  0  1  N  N  N  25.128   9.867  20.701   3.257   0.688  -0.916  H1   3KT  30  
3KT  H2   H2   H  0  1  N  N  N  22.698   9.437  20.647   1.074   1.804  -1.393  H2   3KT  31  
3KT  H3   H3   H  0  1  N  N  N  21.022  11.983  20.697  -0.518   2.372   1.142  H3   3KT  32  
3KT  H4   H4   H  0  1  N  N  N  20.426  10.340  20.284  -0.920   3.076  -0.443  H4   3KT  33  
3KT  H5   H5   H  0  1  N  N  N  18.788  11.357  21.762  -2.864   1.324   0.972  H5   3KT  34  
3KT  H6   H6   H  0  1  N  N  N  18.956   9.577  21.936  -3.084   1.887  -0.702  H6   3KT  35  
3KT  H7   H7   H  0  1  N  N  N  23.065  11.323  26.019  -0.260  -3.157  -0.096  H7   3KT  36  
3KT  H8   H8   H  0  1  N  N  N  23.344  12.639  24.828   1.245  -2.615  -0.877  H8   3KT  37  
3KT  H9   H9   H  0  1  N  N  N  21.862  12.645  25.843   0.976  -2.298   0.854  H9   3KT  38  
3KT  H10  H10  H  0  1  N  N  N  23.088   9.668  25.672   0.524  -2.109  -2.732  H10  3KT  39  
3KT  H12  H12  H  0  1  N  N  N  25.754  12.619  21.529   4.144   0.452   1.863  H12  3KT  40  
3KT  H14  H14  H  0  1  N  N  N  23.443  12.398  20.999   1.252   0.138   0.435  H14  3KT  41  
3KT  H15  H15  H  0  1  N  N  N  23.602  11.115  22.246   1.667   1.437   1.579  H15  3KT  42  
3KT  H16  H16  H  0  1  N  N  N  19.108   9.967  24.441  -3.217  -0.465  -1.476  H16  3KT  43  
3KT  H17  H17  H  0  1  N  N  N  18.611  11.662  24.113  -2.997  -1.028   0.199  H17  3KT  44  
3KT  H18  H18  H  0  1  N  N  N  27.534  12.108  20.001   5.509   0.219  -0.347  H18  3KT  45  
3KT  H19  H19  H  0  1  N  N  N  17.013   9.242  23.205  -5.273   0.774  -0.738  H19  3KT  46  
3KT  H20  H20  H  0  1  N  N  N  24.226   9.478  18.460   3.625   4.371  -0.518  H20  3KT  47  
3KT  H21  H21  H  0  1  N  N  N  23.998  10.854  17.329   3.210   3.072  -1.662  H21  3KT  48  
3KT  H22  H22  H  0  1  N  N  N  26.057  11.100  18.733   3.803   2.704   1.309  H22  3KT  49  
3KT  H23  H23  H  0  1  N  N  N  24.875  12.421  19.021   4.910   2.308  -0.027  H23  3KT  50  
3KT  H24  H24  H  0  1  N  N  N  22.337  11.856  18.805   1.171   4.220  -0.843  H24  3KT  51  
3KT  H25  H25  H  0  1  N  N  N  21.881  10.155  18.453   1.619   3.821   0.833  H25  3KT  52  
3KT  H26  H26  H  0  1  N  N  N  27.018   9.480  21.066   3.724  -2.203  -0.127  H26  3KT  53  
3KT  H27  H27  H  0  1  N  N  N  28.281   9.945  19.877   4.501  -1.490  -1.576  H27  3KT  54  
3KT  H28  H28  H  0  1  N  N  N  28.845  13.092  21.591   7.031  -0.516   1.191  H28  3KT  55  
3KT  H29  H29  H  0  1  N  N  N  27.612  12.669  22.827   5.707  -0.844   2.344  H29  3KT  56  
3KT  H30  H30  H  0  1  N  N  N  16.494  11.339  22.015  -4.770  -0.729   1.871  H30  3KT  57  
3KT  H31  H31  H  0  1  N  N  N  16.267  12.186  23.583  -4.638   1.031   1.645  H31  3KT  58  
3KT  H32  H32  H  0  1  N  N  N  17.276   9.178  25.629  -5.431  -1.501  -1.711  H32  3KT  59  
3KT  H33  H33  H  0  1  N  N  N  16.793  10.904  25.751  -5.234  -2.208  -0.089  H33  3KT  60  
3KT  H34  H34  H  0  1  N  N  N  14.895   9.537  26.358  -7.494  -0.350  -0.957  H34  3KT  61  
3KT  H35  H35  H  0  1  N  N  N  15.069   8.543  24.872  -7.626  -2.110  -0.732  H35  3KT  62  
3KT  H36  H36  H  0  1  N  N  N  28.591   9.171  22.651   5.502  -3.772  -0.546  H36  3KT  63  
3KT  H37  H37  H  0  1  N  N  N  29.006  11.123  23.682   7.288  -2.835   1.243  H37  3KT  64  
3KT  H38  H38  H  0  1  N  N  N  14.093  11.485  22.645  -6.833   0.422   2.624  H38  3KT  65  
3KT  H39  H39  H  0  1  N  N  N  14.663   9.783  22.566  -7.031   1.129   1.003  H39  3KT  66  
3KT  H40  H40  H  0  1  N  N  N  14.260  11.475  25.075  -8.440  -0.893   1.270  H40  3KT  67  
3KT  H41  H41  H  0  1  N  N  N  13.254  10.090  24.530  -6.991  -1.853   1.651  H41  3KT  68  
3KT  H11  H11  H  0  1  N  N  N  21.279   8.589  22.632  -1.151   1.140  -2.509  H11  3KT  69  
3KT  H13  H13  H  0  1  N  N  N  29.860   9.558  21.440   6.638  -2.477  -1.051  H13  3KT  70  
3KT  H42  H42  H  0  1  N  N  N  30.233  11.535  22.437   5.596  -3.105   1.766  H42  3KT  71  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3KT  C18  C20  SING  N  N   1  
3KT  C18  C19  SING  N  N   2  
3KT  C20  C13  SING  N  N   3  
3KT  C19  C12  SING  N  N   4  
3KT  C13  C7   SING  N  N   5  
3KT  C13  C14  SING  N  N   6  
3KT  C12  C14  SING  N  N   7  
3KT  C12  N10  SING  N  N   8  
3KT  C21  C16  SING  N  N   9  
3KT  C21  C26  SING  N  N  10  
3KT  C7   C4   SING  N  N  11  
3KT  C16  N10  SING  N  N  12  
3KT  C16  C22  SING  N  N  13  
3KT  C26  C27  SING  N  N  14  
3KT  C22  C27  SING  N  N  15  
3KT  C4   C9   SING  N  N  16  
3KT  C4   N6   SING  N  N  17  
3KT  C4   C3   SING  N  N  18  
3KT  C9   C15  SING  N  N  19  
3KT  N6   C1   SING  N  N  20  
3KT  C23  C28  SING  N  N  21  
3KT  C23  C17  SING  N  N  22  
3KT  C28  C29  SING  N  N  23  
3KT  O8   C3   DOUB  N  N  24  
3KT  C3   N2   SING  N  N  25  
3KT  C17  C15  SING  N  N  26  
3KT  C17  C24  SING  N  N  27  
3KT  C1   N2   SING  N  N  28  
3KT  C1   N5   DOUB  N  N  29  
3KT  N2   C11  SING  N  N  30  
3KT  C29  C25  SING  N  N  31  
3KT  C24  C25  SING  N  N  32  
3KT  C12  H1   SING  N  N  33  
3KT  C13  H2   SING  N  N  34  
3KT  C7   H3   SING  N  N  35  
3KT  C7   H4   SING  N  N  36  
3KT  C9   H5   SING  N  N  37  
3KT  C9   H6   SING  N  N  38  
3KT  C11  H7   SING  N  N  39  
3KT  C11  H8   SING  N  N  40  
3KT  C11  H9   SING  N  N  41  
3KT  N5   H10  SING  N  N  42  
3KT  N10  H12  SING  N  N  43  
3KT  C14  H14  SING  N  N  44  
3KT  C14  H15  SING  N  N  45  
3KT  C15  H16  SING  N  N  46  
3KT  C15  H17  SING  N  N  47  
3KT  C16  H18  SING  N  N  48  
3KT  C17  H19  SING  N  N  49  
3KT  C18  H20  SING  N  N  50  
3KT  C18  H21  SING  N  N  51  
3KT  C19  H22  SING  N  N  52  
3KT  C19  H23  SING  N  N  53  
3KT  C20  H24  SING  N  N  54  
3KT  C20  H25  SING  N  N  55  
3KT  C21  H26  SING  N  N  56  
3KT  C21  H27  SING  N  N  57  
3KT  C22  H28  SING  N  N  58  
3KT  C22  H29  SING  N  N  59  
3KT  C23  H30  SING  N  N  60  
3KT  C23  H31  SING  N  N  61  
3KT  C24  H32  SING  N  N  62  
3KT  C24  H33  SING  N  N  63  
3KT  C25  H34  SING  N  N  64  
3KT  C25  H35  SING  N  N  65  
3KT  C26  H36  SING  N  N  66  
3KT  C27  H37  SING  N  N  67  
3KT  C28  H38  SING  N  N  68  
3KT  C28  H39  SING  N  N  69  
3KT  C29  H40  SING  N  N  70  
3KT  C29  H41  SING  N  N  71  
3KT  N6   H11  SING  N  N  72  
3KT  C26  H13  SING  N  N  73  
3KT  C27  H42  SING  N  N  74  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
3KT  SMILES            ACDLabs               12.01  "O=C1N(C(=[N@H])NC1(CC3CCCC(NC2CCCC2)C3)CCC4CCCCC4)C"  
3KT  InChI             InChI                 1.03   "InChI=1S/C24H42N4O/c1-28-22(29)24(27-23(28)25,15-14-18-8-3-2-4-9-18)17-19-10-7-13-21(16-19)26-20-11-5-6-12-20/h18-21,26H,2-17H2,1H3,(H2,25,27)/t19-,21+,24+/m0/s1"  
3KT  InChIKey          InChI                 1.03   NOZCXTAZEGFFAQ-XZDHIHRUSA-N  
3KT  SMILES_CANONICAL  CACTVS                3.385  "CN1C(=N)N[C@](CCC2CCCCC2)(C[C@H]3CCC[C@H](C3)NC4CCCC4)C1=O"  
3KT  SMILES            CACTVS                3.385  "CN1C(=N)N[C](CCC2CCCCC2)(C[CH]3CCC[CH](C3)NC4CCCC4)C1=O"  
3KT  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "[H]/N=C/1\N[C@](C(=O)N1C)(CCC2CCCCC2)C[C@H]3CCC[C@H](C3)NC4CCCC4"  
3KT  SMILES            "OpenEye OEToolkits"  1.7.6  "CN1C(=O)C(NC1=N)(CCC2CCCCC2)CC3CCCC(C3)NC4CCCC4"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
3KT  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2E,5R)-5-(2-cyclohexylethyl)-5-{[(1S,3R)-3-(cyclopentylamino)cyclohexyl]methyl}-2-imino-3-methylimidazolidin-4-one"  
3KT  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(5R)-2-azanylidene-5-(2-cyclohexylethyl)-5-[[(1S,3R)-3-(cyclopentylamino)cyclohexyl]methyl]-3-methyl-imidazolidin-4-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
3KT  "Create component"    2014-09-08  RCSB  
3KT  "Initial release"     2014-11-05  RCSB  
3KT  "Other modification"  2019-12-08  RCSB  
##
