data_08T
# 
_chem_comp.id                                    08T 
_chem_comp.name                                  "[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-tris(fluoranyl)beryllium " 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H14 Be F3 N5 O10 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-10-18 
_chem_comp.pdbx_modified_date                    2011-12-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        492.201 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     08T 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3U5Z 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
08T PA    PA    P  0 1 N N N 20.482 -45.143 41.309 2.264  -0.984 -0.942 PA    08T 1  
08T PB    PB    P  0 1 N N N 18.739 -45.192 43.437 4.823  0.346  -0.257 PB    08T 2  
08T BE    BE    BE 0 0 N N N 16.182 -44.835 44.070 6.712  1.379  1.127  BE    08T 3  
08T "C5'" "C5'" C  0 1 N N N 20.843 -43.910 39.212 -0.157 -2.027 -0.508 "C5'" 08T 4  
08T "O5'" "O5'" O  0 1 N N N 21.142 -44.029 40.580 0.883  -1.125 -0.127 "O5'" 08T 5  
08T "C4'" "C4'" C  0 1 N N R 21.491 -42.802 38.509 -1.322 -1.908 0.477  "C4'" 08T 6  
08T "O4'" "O4'" O  0 1 N N N 21.751 -41.720 39.322 -1.930 -0.610 0.361  "O4'" 08T 7  
08T "C3'" "C3'" C  0 1 N N S 22.757 -43.294 38.062 -2.404 -2.952 0.139  "C3'" 08T 8  
08T "O3'" "O3'" O  0 1 N N N 22.820 -43.023 36.679 -2.608 -3.837 1.242  "O3'" 08T 9  
08T "C2'" "C2'" C  0 1 N N R 23.737 -42.594 38.767 -3.676 -2.109 -0.123 "C2'" 08T 10 
08T "O2'" "O2'" O  0 1 N N N 24.604 -41.959 37.820 -4.827 -2.732 0.452  "O2'" 08T 11 
08T "C1'" "C1'" C  0 1 N N R 23.116 -41.579 39.631 -3.342 -0.783 0.606  "C1'" 08T 12 
08T N1    N1    N  0 1 Y N N 27.462 -41.899 41.537 -7.721 2.008  0.733  N1    08T 13 
08T O1A   O1A   O  0 1 N N N 21.471 -46.025 42.096 1.962  -0.403 -2.413 O1A   08T 14 
08T O1B   O1B   O  0 1 N N N 18.182 -46.442 42.888 5.574  -0.913 -0.463 O1B   08T 15 
08T F1    F1    F  0 1 N N N 16.174 -46.189 43.878 7.031  1.975  2.342  F1    08T 16 
08T C2    C2    C  0 1 Y N N 27.068 -41.681 40.282 -7.372 0.984  1.490  C2    08T 17 
08T O2A   O2A   O  0 1 N N N 19.810 -45.998 40.264 2.906  -2.312 -1.058 O2A   08T 18 
08T O2B   O2B   O  0 1 N N N 19.772 -45.451 44.598 5.091  1.339  -1.495 O2B   08T 19 
08T F2    F2    F  0 1 N N N 15.415 -44.180 43.098 7.466  0.222  0.966  F2    08T 20 
08T N3    N3    N  0 1 Y N N 25.754 -41.634 39.970 -6.221 0.361  1.350  N3    08T 21 
08T O3A   O3A   O  0 1 N N N 19.482 -44.428 42.331 3.249  0.022  -0.160 O3A   08T 22 
08T O3B   O3B   O  0 1 N N N 17.521 -44.321 43.988 5.312  1.046  1.108  O3B   08T 23 
08T F3    F3    F  0 1 N N N 15.626 -44.519 45.314 6.992  2.262  0.090  F3    08T 24 
08T C4    C4    C  0 1 Y N N 24.688 -41.792 40.849 -5.350 0.748  0.424  C4    08T 25 
08T C5    C5    C  0 1 Y N N 25.199 -42.021 42.160 -5.674 1.833  -0.407 C5    08T 26 
08T C6    C6    C  0 1 Y N N 26.548 -42.068 42.479 -6.915 2.466  -0.219 C6    08T 27 
08T N6    N6    N  0 1 N N N 26.942 -42.304 43.826 -7.288 3.540  -1.008 N6    08T 28 
08T N7    N7    N  0 1 Y N N 24.211 -42.180 43.017 -4.629 2.016  -1.249 N7    08T 29 
08T C8    C8    C  0 1 Y N N 23.069 -42.061 42.374 -3.707 1.134  -0.994 C8    08T 30 
08T N9    N9    N  0 1 Y N N 23.277 -41.878 41.069 -4.105 0.328  0.030  N9    08T 31 
08T H1    H1    H  0 1 N N N 19.756 -43.763 39.125 -0.503 -1.780 -1.511 H1    08T 32 
08T H2    H2    H  0 1 N N N 21.164 -44.842 38.723 0.225  -3.048 -0.497 H2    08T 33 
08T H3    H3    H  0 1 N N N 20.820 -42.466 37.704 -0.963 -2.060 1.495  H3    08T 34 
08T H4    H4    H  0 1 N N N 22.901 -44.371 38.231 -2.127 -3.512 -0.755 H4    08T 35 
08T H5    H5    H  0 1 N N N 23.648 -43.333 36.332 -3.279 -4.515 1.084  H5    08T 36 
08T H6    H6    H  0 1 N N N 24.307 -43.288 39.402 -3.819 -1.942 -1.191 H6    08T 37 
08T H7    H7    H  0 1 N N N 25.279 -41.476 38.282 -5.023 -3.607 0.090  H7    08T 38 
08T H8    H8    H  0 1 N N N 23.556 -40.585 39.465 -3.539 -0.872 1.674  H8    08T 39 
08T H9    H9    H  0 1 N N N 21.445 -46.912 41.756 1.540  0.467  -2.414 H9    08T 40 
08T H10   H10   H  0 1 N N N 27.807 -41.541 39.507 -8.058 0.644  2.252  H10   08T 41 
08T H11   H11   H  0 1 N N N 19.857 -46.386 44.744 4.629  2.186  -1.427 H11   08T 42 
08T H12   H12   H  0 1 N N N 27.940 -42.311 43.885 -8.148 3.968  -0.869 H12   08T 43 
08T H13   H13   H  0 1 N N N 26.579 -41.579 44.411 -6.691 3.865  -1.700 H13   08T 44 
08T H14   H14   H  0 1 N N N 22.096 -42.105 42.840 -2.766 1.052  -1.518 H14   08T 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
08T "O3'" "C3'" SING N N 1  
08T "O2'" "C2'" SING N N 2  
08T "C3'" "C4'" SING N N 3  
08T "C3'" "C2'" SING N N 4  
08T "C4'" "C5'" SING N N 5  
08T "C4'" "O4'" SING N N 6  
08T "C2'" "C1'" SING N N 7  
08T "C5'" "O5'" SING N N 8  
08T "O4'" "C1'" SING N N 9  
08T "C1'" N9    SING N N 10 
08T N3    C2    DOUB Y N 11 
08T N3    C4    SING Y N 12 
08T O2A   PA    DOUB N N 13 
08T C2    N1    SING Y N 14 
08T "O5'" PA    SING N N 15 
08T C4    N9    SING Y N 16 
08T C4    C5    DOUB Y N 17 
08T N9    C8    SING Y N 18 
08T PA    O1A   SING N N 19 
08T PA    O3A   SING N N 20 
08T N1    C6    DOUB Y N 21 
08T C5    C6    SING Y N 22 
08T C5    N7    SING Y N 23 
08T O3A   PB    SING N N 24 
08T C8    N7    DOUB Y N 25 
08T C6    N6    SING N N 26 
08T O1B   PB    DOUB N N 27 
08T PB    O3B   SING N N 28 
08T PB    O2B   SING N N 29 
08T F1    BE    SING N N 30 
08T BE    F3    SING N N 31 
08T O3B   BE    SING N N 32 
08T BE    F2    SING N N 33 
08T "C5'" H1    SING N N 34 
08T "C5'" H2    SING N N 35 
08T "C4'" H3    SING N N 36 
08T "C3'" H4    SING N N 37 
08T "O3'" H5    SING N N 38 
08T "C2'" H6    SING N N 39 
08T "O2'" H7    SING N N 40 
08T "C1'" H8    SING N N 41 
08T O1A   H9    SING N N 42 
08T C2    H10   SING N N 43 
08T O2B   H11   SING N N 44 
08T N6    H12   SING N N 45 
08T N6    H13   SING N N 46 
08T C8    H14   SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
08T InChI            InChI                1.03  
"InChI=1S/C10H15N5O10P2.Be.3FH/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20;;;;/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20);;3*1H/q;+4;;;/p-4/t4-,6-,7-,10-;;;;/m1..../s1" 
08T InChIKey         InChI                1.03  WOGYHYSOODLXII-KWIZKVQNSA-J 
08T SMILES_CANONICAL CACTVS               3.370 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(=O)O[Be](F)(F)F)[C@@H](O)[C@H]3O" 
08T SMILES           CACTVS               3.370 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[Be](F)(F)F)[CH](O)[CH]3O" 
08T SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "[Be](OP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O)(F)(F)F" 
08T SMILES           "OpenEye OEToolkits" 1.7.2 "[Be](OP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O)(F)(F)F" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
08T "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-tris(fluoranyl)beryllium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
08T "Create component" 2011-10-18 RCSB 
# 
