data_XDS
# 
_chem_comp.id                                    XDS 
_chem_comp.name                                  "(5S)-5-(dioxidanyl)-9-methyl-7H-purine-2,6,8-trione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H6 N4 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-04-01 
_chem_comp.pdbx_modified_date                    2014-10-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        214.136 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XDS 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4CW2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XDS O4  O4  O 0 1 N N N 27.921 27.467 37.534 -2.939 -2.027 0.113  O4  XDS 1  
XDS C4  C4  C 0 1 N N N 29.081 27.103 37.492 -1.995 -1.281 -0.071 C4  XDS 2  
XDS N2  N2  N 0 1 N N N 29.820 27.281 36.307 -2.251 -0.066 -0.580 N2  XDS 3  
XDS C3  C3  C 0 1 N N N 31.140 26.995 36.119 -1.315 0.917  -0.555 C3  XDS 4  
XDS O3  O3  O 0 1 N N N 31.716 27.081 35.042 -1.524 2.021  -1.012 O3  XDS 5  
XDS N3  N3  N 0 1 N N N 29.642 26.408 38.568 -0.772 -1.728 0.254  N3  XDS 6  
XDS C5  C5  C 0 1 N N N 30.892 26.158 38.475 0.267  -0.960 0.178  C5  XDS 7  
XDS N   N   N 0 1 N N N 31.701 25.381 39.235 1.619  -1.023 0.120  N   XDS 8  
XDS C   C   C 0 1 N N N 31.307 24.793 40.515 2.448  -2.071 0.722  C   XDS 9  
XDS C2  C2  C 0 1 N N S 31.866 26.676 37.417 0.003  0.544  0.079  C2  XDS 10 
XDS O1  O1  O 0 1 N N N 32.084 28.132 37.797 0.101  1.139  1.375  O1  XDS 11 
XDS O2  O2  O 0 1 N N N 32.634 28.296 39.155 -0.103 2.594  1.382  O2  XDS 12 
XDS N1  N1  N 0 1 N N N 33.035 25.862 37.438 1.121  0.976  -0.767 N1  XDS 13 
XDS C1  C1  C 0 1 N N N 32.949 25.186 38.643 2.080  0.035  -0.581 C1  XDS 14 
XDS O   O   O 0 1 N N N 33.846 24.488 39.124 3.218  0.132  -0.997 O   XDS 15 
XDS H2  H2  H 0 1 N N N 29.326 27.656 35.522 -3.120 0.113  -0.973 H2  XDS 16 
XDS HC1 HC1 H 0 1 N N N 32.145 24.210 40.924 2.591  -2.878 0.003  HC1 XDS 17 
XDS HC2 HC2 H 0 1 N N N 31.039 25.594 41.220 3.417  -1.655 0.998  HC2 XDS 18 
XDS HC3 HC3 H 0 1 N N N 30.440 24.133 40.364 1.953  -2.461 1.611  HC3 XDS 19 
XDS H1  H1  H 0 1 N N N 33.751 25.795 36.744 1.165  1.763  -1.332 H1  XDS 20 
XDS H3  H3  H 0 1 N N N 32.750 29.220 39.341 -0.036 2.996  2.259  H3  XDS 21 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XDS O4 C4  DOUB N N 1  
XDS C4 N2  SING N N 2  
XDS C4 N3  SING N N 3  
XDS N2 C3  SING N N 4  
XDS C3 O3  DOUB N N 5  
XDS C3 C2  SING N N 6  
XDS N3 C5  DOUB N N 7  
XDS C5 N   SING N N 8  
XDS C5 C2  SING N N 9  
XDS N  C   SING N N 10 
XDS N  C1  SING N N 11 
XDS C2 O1  SING N N 12 
XDS C2 N1  SING N N 13 
XDS O1 O2  SING N N 14 
XDS N1 C1  SING N N 15 
XDS C1 O   DOUB N N 16 
XDS N2 H2  SING N N 17 
XDS C  HC1 SING N N 18 
XDS C  HC2 SING N N 19 
XDS C  HC3 SING N N 20 
XDS N1 H1  SING N N 21 
XDS O2 H3  SING N N 22 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XDS SMILES           ACDLabs              12.01 "O=C2N=C1N(C(=O)NC1(OO)C(=O)N2)C"                                                                    
XDS InChI            InChI                1.03  "InChI=1S/C6H6N4O5/c1-10-2-6(15-14,9-5(10)13)3(11)8-4(12)7-2/h14H,1H3,(H,9,13)(H,8,11,12)/t6-/m0/s1" 
XDS InChIKey         InChI                1.03  JQXTWGOGXIASQD-LURJTMIESA-N                                                                          
XDS SMILES_CANONICAL CACTVS               3.385 "CN1C(=O)N[C@@]2(OO)C(=O)NC(=O)N=C12"                                                                
XDS SMILES           CACTVS               3.385 "CN1C(=O)N[C]2(OO)C(=O)NC(=O)N=C12"                                                                  
XDS SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CN1C2=NC(=O)NC(=O)[C@@]2(NC1=O)OO"                                                                  
XDS SMILES           "OpenEye OEToolkits" 1.7.6 "CN1C2=NC(=O)NC(=O)C2(NC1=O)OO"                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XDS "SYSTEMATIC NAME" ACDLabs              12.01 "(5S)-5-hydroperoxy-9-methyl-5,7-dihydro-1H-purine-2,6,8(9H)-trione" 
XDS "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(5S)-5-(dioxidanyl)-9-methyl-7H-purine-2,6,8-trione"                
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XDS "Create component" 2014-04-01 EBI  
XDS "Initial release"  2014-10-29 RCSB 
# 
