data_X2S
#

_chem_comp.id                                   X2S
_chem_comp.name                                 "4-(3-chloro-5-cyanophenoxy)-3-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenyl sulfurofluoridate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H13 Cl F N3 O7 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-11-23
_chem_comp.pdbx_modified_date                   2021-01-08
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       481.839
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    X2S
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7KRD
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
X2S  N    N1   N   0  1  N  N  N  469.085  -16.696  129.273  -4.853  -2.117  -3.764  N    X2S   1  
X2S  C    C1   C   0  1  N  N  N  468.613  -16.350  128.290  -4.544  -1.910  -2.691  C    X2S   2  
X2S  O    O1   O   0  1  N  N  N  467.202  -17.160  123.728  -1.163  -0.813   0.573  O    X2S   3  
X2S  C1   C2   C   0  1  Y  N  N  467.984  -15.887  127.076  -4.155  -1.649  -1.337  C1   X2S   4  
X2S  C10  C3   C   0  1  Y  N  N  465.493  -16.724  120.525   1.224   1.844  -0.161  C10  X2S   5  
X2S  C11  C4   C   0  1  Y  N  N  465.825  -17.194  121.782   0.704   0.644   0.295  C11  X2S   6  
X2S  C12  C5   C   0  1  N  N  N  463.931  -18.107  122.972   2.893   0.091   1.041  C12  X2S   7  
X2S  C13  C6   C   0  1  N  N  N  463.200  -19.431  122.882   3.641  -1.043   1.746  C13  X2S   8  
X2S  C14  C7   C   0  1  N  N  N  464.674  -20.493  124.551   2.609  -3.142   1.015  C14  X2S   9  
X2S  C15  C8   C   0  1  N  N  N  465.404  -21.514  125.037   2.598  -4.242   0.232  C15  X2S  10  
X2S  C16  C9   C   0  1  N  N  N  465.518  -22.724  124.281   3.651  -4.439  -0.694  C16  X2S  11  
X2S  C17  C10  C   0  1  N  N  N  464.092  -21.689  122.544   4.621  -2.434   0.009  C17  X2S  12  
X2S  C18  C11  C   0  1  Y  N  N  468.000  -16.699  125.937  -2.826  -1.350  -1.036  C18  X2S  13  
X2S  C2   C12  C   0  1  Y  N  N  467.296  -14.685  127.066  -5.106  -1.688  -0.315  C2   X2S  14  
X2S  C3   C13  C   0  1  Y  N  N  466.607  -14.311  125.932  -4.728  -1.435   0.988  C3   X2S  15  
X2S  C4   C14  C   0  1  Y  N  N  466.587  -15.100  124.797  -3.408  -1.144   1.286  C4   X2S  16  
X2S  C5   C15  C   0  1  Y  N  N  467.284  -16.295  124.818  -2.457  -1.099   0.275  C5   X2S  17  
X2S  C6   C16  C   0  1  Y  N  N  466.986  -16.724  122.423  -0.650   0.366   0.127  C6   X2S  18  
X2S  C7   C17  C   0  1  Y  N  N  467.852  -15.875  121.748  -1.474   1.289  -0.494  C7   X2S  19  
X2S  C8   C18  C   0  1  Y  N  N  467.540  -15.450  120.467  -0.953   2.487  -0.949  C8   X2S  20  
X2S  C9   C19  C   0  1  Y  N  N  466.344  -15.840  119.881   0.394   2.769  -0.778  C9   X2S  21  
X2S  N1   N2   N   0  1  N  N  N  464.029  -20.566  123.348   3.629  -2.237   0.897  N1   X2S  22  
X2S  N2   N3   N   0  1  N  N  N  464.847  -22.714  123.076   4.640  -3.527  -0.776  N2   X2S  23  
X2S  O1   O2   O   0  1  N  N  N  465.931  -15.249  118.652   0.904   3.947  -1.225  O1   X2S  24  
X2S  O2   O3   O   0  1  N  N  N  463.628  -14.494  119.282   1.084   6.277  -0.915  O2   X2S  25  
X2S  O3   O4   O   0  1  N  N  N  464.251  -14.665  116.929  -0.300   4.843   0.593  O3   X2S  26  
X2S  O4   O5   O   0  1  N  N  N  465.219  -18.267  122.375   1.515  -0.262   0.904  O4   X2S  27  
X2S  O5   O6   O   0  1  N  N  N  466.145  -23.741  124.628   3.662  -5.424  -1.410  O5   X2S  28  
X2S  O6   O7   O   0  1  N  N  N  463.540  -21.777  121.465   5.520  -1.619  -0.076  O6   X2S  29  
X2S  S    S1   S   0  1  N  N  N  464.579  -14.389  118.261   0.857   5.071  -0.199  S    X2S  30  
X2S  CL   CL1  CL  0  0  N  N  N  465.723  -12.814  125.933  -5.911  -1.483   2.258  CL   X2S  31  
X2S  H1   H1   H   0  1  N  N  N  464.578  -17.043  120.049   2.274   2.062  -0.032  H1   X2S  32  
X2S  H2   H2   H   0  1  N  N  N  464.043  -17.814  124.026   2.978   1.003   1.631  H2   X2S  33  
X2S  H3   H3   H   0  1  N  N  N  463.365  -17.332  122.434   3.326   0.254   0.055  H3   X2S  34  
X2S  H4   H4   H   0  1  N  N  N  462.294  -19.377  123.503   4.672  -0.739   1.930  H4   X2S  35  
X2S  H5   H5   H   0  1  N  N  N  462.916  -19.607  121.834   3.153  -1.266   2.694  H5   X2S  36  
X2S  H6   H6   H   0  1  N  N  N  464.595  -19.585  125.131   1.815  -2.974   1.727  H6   X2S  37  
X2S  H7   H7   H   0  1  N  N  N  465.901  -21.421  125.992   1.797  -4.962   0.312  H7   X2S  38  
X2S  H8   H8   H   0  1  N  N  N  468.559  -17.623  125.928  -2.087  -1.315  -1.823  H8   X2S  39  
X2S  H9   H9   H   0  1  N  N  N  467.299  -14.047  127.938  -6.137  -1.914  -0.544  H9   X2S  40  
X2S  H10  H10  H   0  1  N  N  N  466.042  -14.792  123.917  -3.117  -0.947   2.307  H10  X2S  41  
X2S  H11  H11  H   0  1  N  N  N  468.766  -15.547  122.220  -2.524   1.074  -0.624  H11  X2S  42  
X2S  H12  H12  H   0  1  N  N  N  468.226  -14.816  119.925  -1.597   3.206  -1.433  H12  X2S  43  
X2S  H13  H13  H   0  1  N  N  N  464.916  -23.545  122.524   5.362  -3.654  -1.411  H13  X2S  44  
X2S  F1   F1   F   0  1  N  Y  N  464.820  -12.973  118.602   2.122   4.877   0.777  F1   X2S  45  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
X2S  O3   S    DOUB  N  N   1  
X2S  S    O1   SING  N  N   2  
X2S  S    O2   DOUB  N  N   3  
X2S  O1   C9   SING  N  N   4  
X2S  C9   C8   DOUB  Y  N   5  
X2S  C9   C10  SING  Y  N   6  
X2S  C8   C7   SING  Y  N   7  
X2S  C10  C11  DOUB  Y  N   8  
X2S  O6   C17  DOUB  N  N   9  
X2S  C7   C6   DOUB  Y  N  10  
X2S  C11  O4   SING  N  N  11  
X2S  C11  C6   SING  Y  N  12  
X2S  O4   C12  SING  N  N  13  
X2S  C6   O    SING  N  N  14  
X2S  C17  N2   SING  N  N  15  
X2S  C17  N1   SING  N  N  16  
X2S  C13  C12  SING  N  N  17  
X2S  C13  N1   SING  N  N  18  
X2S  N2   C16  SING  N  N  19  
X2S  N1   C14  SING  N  N  20  
X2S  O    C5   SING  N  N  21  
X2S  C16  O5   DOUB  N  N  22  
X2S  C16  C15  SING  N  N  23  
X2S  C14  C15  DOUB  N  N  24  
X2S  C4   C5   DOUB  Y  N  25  
X2S  C4   C3   SING  Y  N  26  
X2S  C5   C18  SING  Y  N  27  
X2S  C3   CL   SING  N  N  28  
X2S  C3   C2   DOUB  Y  N  29  
X2S  C18  C1   DOUB  Y  N  30  
X2S  C2   C1   SING  Y  N  31  
X2S  C1   C    SING  N  N  32  
X2S  C    N    TRIP  N  N  33  
X2S  C10  H1   SING  N  N  34  
X2S  C12  H2   SING  N  N  35  
X2S  C12  H3   SING  N  N  36  
X2S  C13  H4   SING  N  N  37  
X2S  C13  H5   SING  N  N  38  
X2S  C14  H6   SING  N  N  39  
X2S  C15  H7   SING  N  N  40  
X2S  C18  H8   SING  N  N  41  
X2S  C2   H9   SING  N  N  42  
X2S  C4   H10  SING  N  N  43  
X2S  C7   H11  SING  N  N  44  
X2S  C8   H12  SING  N  N  45  
X2S  N2   H13  SING  N  N  46  
X2S  S    F1   SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
X2S  SMILES            ACDLabs               12.01  "N#Cc3cc(Oc1c(cc(cc1)OS(=O)(=O)F)OCCN2C=CC(=O)NC2=O)cc(c3)Cl"  
X2S  InChI             InChI                 1.03   "InChI=1S/C19H13ClFN3O7S/c20-13-7-12(11-22)8-15(9-13)30-16-2-1-14(31-32(21,27)28)10-17(16)29-6-5-24-4-3-18(25)23-19(24)26/h1-4,7-10H,5-6H2,(H,23,25,26)"  
X2S  InChIKey          InChI                 1.03   RUICQBSNQUGNNJ-UHFFFAOYSA-N  
X2S  SMILES_CANONICAL  CACTVS                3.385  "F[S](=O)(=O)Oc1ccc(Oc2cc(Cl)cc(c2)C#N)c(OCCN3C=CC(=O)NC3=O)c1"  
X2S  SMILES            CACTVS                3.385  "F[S](=O)(=O)Oc1ccc(Oc2cc(Cl)cc(c2)C#N)c(OCCN3C=CC(=O)NC3=O)c1"  
X2S  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(c(cc1OS(=O)(=O)F)OCCN2C=CC(=O)NC2=O)Oc3cc(cc(c3)Cl)C#N"  
X2S  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(c(cc1OS(=O)(=O)F)OCCN2C=CC(=O)NC2=O)Oc3cc(cc(c3)Cl)C#N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
X2S  "SYSTEMATIC NAME"  ACDLabs               12.01  "4-(3-chloro-5-cyanophenoxy)-3-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenyl sulfurofluoridate"  
X2S  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "1-[2-[2-(3-chloranyl-5-cyano-phenoxy)-5-fluorosulfonyloxy-phenoxy]ethyl]-2,4-bis(oxidanylidene)pyrimidine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
X2S  "Create component"  2020-11-23  RCSB  
X2S  "Initial release"   2021-01-13  RCSB  
##
