data_LES
#

_chem_comp.id                                   LES
_chem_comp.name                                 "(3S)-N-(pyrimidin-2-yl)azepan-3-amine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H16 N4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-02-22
_chem_comp.pdbx_modified_date                   2019-05-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       192.261
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LES
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5QOS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LES  N1   N1   N  0  1  N  N  N  -38.995  18.165  77.654   0.432   1.058  -0.483  N1   LES   1  
LES  N3   N2   N  0  1  Y  N  N  -38.282  17.379  75.571   2.769   1.027  -0.498  N3   LES   2  
LES  C4   C1   C  0  1  N  N  N  -39.118  18.269  80.139  -1.250  -0.582  -1.208  C4   LES   3  
LES  C5   C2   C  0  1  N  N  N  -39.160  20.508  81.424  -3.497  -0.853  -0.350  C5   LES   4  
LES  C6   C3   C  0  1  Y  N  N  -38.024  18.191  76.655   1.629   0.444  -0.158  C6   LES   5  
LES  C7   C4   C  0  1  Y  N  N  -36.071  19.002  75.740   2.733  -1.327   0.814  C7   LES   6  
LES  C8   C5   C  0  1  Y  N  N  -36.232  18.229  74.625   3.943  -0.745   0.472  C8   LES   7  
LES  N    N3   N  0  1  N  N  N  -38.638  19.135  81.246  -2.220  -1.477  -0.748  N    LES   8  
LES  C    C6   C  0  1  N  N  N  -40.565  20.777  80.925  -3.348  -0.341   1.061  C    LES   9  
LES  C1   C7   C  0  1  N  N  N  -40.663  20.970  79.403  -2.955   1.146   1.086  C1   LES  10  
LES  C2   C8   C  0  1  N  N  N  -40.444  19.751  78.551  -1.908   1.484   0.006  C2   LES  11  
LES  C3   C9   C  0  1  N  N  S  -39.047  19.050  78.788  -0.838   0.429  -0.115  C3   LES  12  
LES  C9   C10  C  0  1  Y  N  N  -37.334  17.440  74.575   3.930   0.466  -0.202  C9   LES  13  
LES  N2   N4   N  0  1  Y  N  N  -36.957  19.014  76.792   1.607  -0.714   0.487  N2   LES  14  
LES  H1   H1   H  0  1  N  N  N  -39.866  18.290  77.180   0.435   1.908  -0.952  H1   LES  15  
LES  H2   H2   H  0  1  N  N  N  -40.159  17.970  80.334  -0.370  -1.143  -1.523  H2   LES  16  
LES  H3   H3   H  0  1  N  N  N  -38.485  17.372  80.076  -1.648  -0.036  -2.064  H3   LES  17  
LES  H4   H4   H  0  1  N  N  N  -38.482  21.193  80.893  -3.727  -0.024  -1.020  H4   LES  18  
LES  H5   H5   H  0  1  N  N  N  -39.141  20.734  82.500  -4.297  -1.592  -0.391  H5   LES  19  
LES  H6   H6   H  0  1  N  N  N  -35.200  19.638  75.799   2.709  -2.270   1.339  H6   LES  20  
LES  H7   H7   H  0  1  N  N  N  -35.513  18.246  73.819   4.877  -1.224   0.726  H7   LES  21  
LES  H8   H8   H  0  1  N  N  N  -38.834  18.645  82.095  -2.372  -2.219  -1.414  H8   LES  22  
LES  H10  H10  H  0  1  N  N  N  -40.937  21.690  81.414  -4.293  -0.468   1.588  H10  LES  23  
LES  H11  H11  H  0  1  N  N  N  -41.201  19.925  81.207  -2.576  -0.920   1.570  H11  LES  24  
LES  H12  H12  H  0  1  N  N  N  -39.911  21.718  79.113  -3.846   1.751   0.917  H12  LES  25  
LES  H13  H13  H  0  1  N  N  N  -41.669  21.356  79.180  -2.543   1.388   2.066  H13  LES  26  
LES  H14  H14  H  0  1  N  N  N  -40.507  20.050  77.494  -2.413   1.586  -0.955  H14  LES  27  
LES  H15  H15  H  0  1  N  N  N  -41.239  19.024  78.774  -1.437   2.435   0.257  H15  LES  28  
LES  H16  H16  H  0  1  N  N  N  -38.232  19.789  78.797  -0.726  -0.090   0.837  H16  LES  29  
LES  H17  H17  H  0  1  N  N  N  -37.476  16.822  73.701   4.856   0.946  -0.482  H17  LES  30  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LES  C9  C8   DOUB  Y  N   1  
LES  C9  N3   SING  Y  N   2  
LES  C8  C7   SING  Y  N   3  
LES  N3  C6   DOUB  Y  N   4  
LES  C7  N2   DOUB  Y  N   5  
LES  C6  N2   SING  Y  N   6  
LES  C6  N1   SING  N  N   7  
LES  N1  C3   SING  N  N   8  
LES  C2  C3   SING  N  N   9  
LES  C2  C1   SING  N  N  10  
LES  C3  C4   SING  N  N  11  
LES  C1  C    SING  N  N  12  
LES  C4  N    SING  N  N  13  
LES  C   C5   SING  N  N  14  
LES  N   C5   SING  N  N  15  
LES  N1  H1   SING  N  N  16  
LES  C4  H2   SING  N  N  17  
LES  C4  H3   SING  N  N  18  
LES  C5  H4   SING  N  N  19  
LES  C5  H5   SING  N  N  20  
LES  C7  H6   SING  N  N  21  
LES  C8  H7   SING  N  N  22  
LES  N   H8   SING  N  N  23  
LES  C   H10  SING  N  N  24  
LES  C   H11  SING  N  N  25  
LES  C1  H12  SING  N  N  26  
LES  C1  H13  SING  N  N  27  
LES  C2  H14  SING  N  N  28  
LES  C2  H15  SING  N  N  29  
LES  C3  H16  SING  N  N  30  
LES  C9  H17  SING  N  N  31  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LES  SMILES            ACDLabs               12.01  "N(C1CNCCCC1)c2ncccn2"  
LES  InChI             InChI                 1.03   "InChI=1S/C10H16N4/c1-2-5-11-8-9(4-1)14-10-12-6-3-7-13-10/h3,6-7,9,11H,1-2,4-5,8H2,(H,12,13,14)/t9-/m0/s1"  
LES  InChIKey          InChI                 1.03   PFXDAYBNPUUKPB-VIFPVBQESA-N  
LES  SMILES_CANONICAL  CACTVS                3.385  "C1CC[C@@H](CNC1)Nc2ncccn2"  
LES  SMILES            CACTVS                3.385  "C1CC[CH](CNC1)Nc2ncccn2"  
LES  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1cnc(nc1)N[C@H]2CCCCNC2"  
LES  SMILES            "OpenEye OEToolkits"  2.0.6  "c1cnc(nc1)NC2CCCCNC2"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LES  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3S)-N-(pyrimidin-2-yl)azepan-3-amine"  
LES  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(3~{S})-~{N}-pyrimidin-2-ylazepan-3-amine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LES  "Create component"  2019-02-22  RCSB  
LES  "Initial release"   2019-05-08  RCSB  
##
