data_D4S
# 
_chem_comp.id                                    D4S 
_chem_comp.name                                  "(6R)-6-(3-aminophenyl)-3-[(2-chlorophenyl)sulfanyl]-4-hydroxy-6-(thiophen-3-yl)-5,6-dihydro-2H-pyran-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H16 Cl N O3 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-10-17 
_chem_comp.pdbx_modified_date                    2018-10-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        429.940 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     D4S 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6BAX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
D4S C4  C1  C  0 1 Y N N -9.622  -17.798 17.828 4.946  -2.893 -0.324 C4  D4S 1  
D4S C14 C2  C  0 1 N N R -10.931 -12.125 21.612 -1.795 -0.096 0.304  C14 D4S 2  
D4S C5  C3  C  0 1 Y N N -10.394 -16.735 18.299 3.587  -2.947 -0.073 C5  D4S 3  
D4S C6  C4  C  0 1 Y N N -9.783  -15.534 18.644 2.874  -1.781 0.129  C6  D4S 4  
D4S C7  C5  C  0 1 Y N N -8.391  -15.382 18.519 3.524  -0.554 0.081  C7  D4S 5  
D4S C9  C6  C  0 1 N N N -8.752  -12.980 19.984 0.950  0.374  0.430  C9  D4S 6  
D4S C10 C7  C  0 1 N N N -9.749  -12.257 19.413 0.263  0.476  1.583  C10 D4S 7  
D4S C13 C8  C  0 1 N N N -10.766 -11.502 20.218 -1.157 -0.007 1.692  C13 D4S 8  
D4S C3  C9  C  0 1 Y N N -8.239  -17.657 17.691 5.598  -1.674 -0.368 C3  D4S 9  
D4S CL1 CL1 CL 0 0 N N N -5.877  -16.299 17.838 5.709  1.026  -0.227 CL1 D4S 10 
D4S C2  C10 C  0 1 Y N N -7.614  -16.457 18.031 4.891  -0.504 -0.171 C2  D4S 11 
D4S S8  S1  S  0 1 N N N -7.589  -13.879 19.007 2.618  0.936  0.338  S8  D4S 12 
D4S O11 O1  O  0 1 N N N -9.879  -12.217 18.084 0.862  1.023  2.664  O11 D4S 13 
D4S C15 C11 C  0 1 Y N N -11.638 -13.469 21.444 -2.033 1.292  -0.234 C15 D4S 14 
D4S C16 C12 C  0 1 Y N N -11.194 -14.573 22.060 -2.290 2.334  0.558  C16 D4S 15 
D4S S17 S2  S  0 1 Y N N -12.150 -15.965 21.601 -2.511 3.778  -0.421 S17 D4S 16 
D4S C18 C13 C  0 1 Y N N -13.128 -14.968 20.519 -2.234 2.858  -1.894 C18 D4S 17 
D4S C19 C14 C  0 1 Y N N -12.690 -13.709 20.560 -1.996 1.582  -1.587 C19 D4S 18 
D4S C20 C15 C  0 1 Y N N -11.638 -11.088 22.474 -3.106 -0.833 0.398  C20 D4S 19 
D4S C21 C16 C  0 1 Y N N -10.867 -10.185 23.221 -3.552 -1.585 -0.671 C21 D4S 20 
D4S C22 C17 C  0 1 Y N N -11.471 -9.187  23.994 -4.760 -2.264 -0.584 C22 D4S 21 
D4S N23 N1  N  0 1 N N N -10.692 -8.286  24.732 -5.214 -3.027 -1.663 N23 D4S 22 
D4S C24 C18 C  0 1 Y N N -12.867 -9.083  24.007 -5.516 -2.185 0.579  C24 D4S 23 
D4S C25 C19 C  0 1 Y N N -13.639 -9.959  23.252 -5.064 -1.431 1.644  C25 D4S 24 
D4S C26 C20 C  0 1 Y N N -13.030 -10.949 22.483 -3.858 -0.760 1.556  C26 D4S 25 
D4S O27 O2  O  0 1 N N N -9.605  -12.335 22.180 -0.907 -0.805 -0.572 O27 D4S 26 
D4S C28 C21 C  0 1 N N N -8.653  -13.008 21.455 0.300  -0.207 -0.751 C28 D4S 27 
D4S O29 O3  O  0 1 N N N -7.774  -13.627 22.020 0.822  -0.156 -1.849 O29 D4S 28 
D4S H1  H1  H  0 1 N N N -10.096 -18.733 17.568 5.501  -3.807 -0.482 H1  D4S 29 
D4S H2  H2  H  0 1 N N N -11.464 -16.845 18.395 3.083  -3.901 -0.036 H2  D4S 30 
D4S H3  H3  H  0 1 N N N -10.382 -14.713 19.010 1.813  -1.824 0.324  H3  D4S 31 
D4S H4  H4  H  0 1 N N N -10.437 -10.458 20.326 -1.728 0.687  2.308  H4  D4S 32 
D4S H5  H5  H  0 1 N N N -11.733 -11.529 19.694 -1.168 -0.993 2.158  H5  D4S 33 
D4S H6  H6  H  0 1 N N N -7.650  -18.482 17.319 6.660  -1.637 -0.564 H6  D4S 34 
D4S H12 H7  H  0 1 N N N -10.621 -11.670 17.854 1.744  1.378  2.488  H12 D4S 35 
D4S H7  H8  H  0 1 N N N -10.360 -14.600 22.746 -2.354 2.296  1.636  H7  D4S 36 
D4S H8  H9  H  0 1 N N N -13.952 -15.323 19.918 -2.245 3.266  -2.894 H8  D4S 37 
D4S H9  H10 H  0 1 N N N -13.120 -12.928 19.950 -1.798 0.831  -2.337 H9  D4S 38 
D4S H10 H11 H  0 1 N N N -9.790  -10.261 23.199 -2.962 -1.645 -1.574 H10 D4S 39 
D4S H11 H12 H  0 1 N N N -11.290 -7.649  25.219 -4.686 -3.082 -2.474 H11 D4S 40 
D4S H13 H13 H  0 1 N N N -10.134 -8.790  25.392 -6.058 -3.501 -1.601 H13 D4S 41 
D4S H14 H14 H  0 1 N N N -13.345 -8.321  24.605 -6.456 -2.711 0.650  H14 D4S 42 
D4S H15 H15 H  0 1 N N N -14.715 -9.872  23.262 -5.651 -1.368 2.548  H15 D4S 43 
D4S H16 H16 H  0 1 N N N -13.638 -11.615 21.889 -3.505 -0.174 2.391  H16 D4S 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
D4S C3  C4  DOUB Y N 1  
D4S C3  C2  SING Y N 2  
D4S C4  C5  SING Y N 3  
D4S CL1 C2  SING N N 4  
D4S C2  C7  DOUB Y N 5  
D4S O11 C10 SING N N 6  
D4S C5  C6  DOUB Y N 7  
D4S C7  C6  SING Y N 8  
D4S C7  S8  SING N N 9  
D4S S8  C9  SING N N 10 
D4S C10 C9  DOUB N N 11 
D4S C10 C13 SING N N 12 
D4S C9  C28 SING N N 13 
D4S C13 C14 SING N N 14 
D4S C18 C19 DOUB Y N 15 
D4S C18 S17 SING Y N 16 
D4S C19 C15 SING Y N 17 
D4S C15 C14 SING N N 18 
D4S C15 C16 DOUB Y N 19 
D4S C28 O29 DOUB N N 20 
D4S C28 O27 SING N N 21 
D4S S17 C16 SING Y N 22 
D4S C14 O27 SING N N 23 
D4S C14 C20 SING N N 24 
D4S C20 C26 DOUB Y N 25 
D4S C20 C21 SING Y N 26 
D4S C26 C25 SING Y N 27 
D4S C21 C22 DOUB Y N 28 
D4S C25 C24 DOUB Y N 29 
D4S C22 C24 SING Y N 30 
D4S C22 N23 SING N N 31 
D4S C4  H1  SING N N 32 
D4S C5  H2  SING N N 33 
D4S C6  H3  SING N N 34 
D4S C13 H4  SING N N 35 
D4S C13 H5  SING N N 36 
D4S C3  H6  SING N N 37 
D4S O11 H12 SING N N 38 
D4S C16 H7  SING N N 39 
D4S C18 H8  SING N N 40 
D4S C19 H9  SING N N 41 
D4S C21 H10 SING N N 42 
D4S N23 H11 SING N N 43 
D4S N23 H13 SING N N 44 
D4S C24 H14 SING N N 45 
D4S C25 H15 SING N N 46 
D4S C26 H16 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
D4S SMILES           ACDLabs              12.01 "c4ccc(SC=2C(OC(c1cccc(c1)N)(CC=2O)c3cscc3)=O)c(c4)Cl"                                                                                           
D4S InChI            InChI                1.03  "InChI=1S/C21H16ClNO3S2/c22-16-6-1-2-7-18(16)28-19-17(24)11-21(26-20(19)25,14-8-9-27-12-14)13-4-3-5-15(23)10-13/h1-10,12,24H,11,23H2/t21-/m1/s1" 
D4S InChIKey         InChI                1.03  UHNGEDKMVUGEAD-OAQYLSRUSA-N                                                                                                                      
D4S SMILES_CANONICAL CACTVS               3.385 "Nc1cccc(c1)[C@]2(CC(=C(Sc3ccccc3Cl)C(=O)O2)O)c4cscc4"                                                                                           
D4S SMILES           CACTVS               3.385 "Nc1cccc(c1)[C]2(CC(=C(Sc3ccccc3Cl)C(=O)O2)O)c4cscc4"                                                                                            
D4S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)SC2=C(C[C@@](OC2=O)(c3cccc(c3)N)c4ccsc4)O)Cl"                                                                                        
D4S SMILES           "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)SC2=C(CC(OC2=O)(c3cccc(c3)N)c4ccsc4)O)Cl"                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
D4S "SYSTEMATIC NAME" ACDLabs              12.01 "(6R)-6-(3-aminophenyl)-3-[(2-chlorophenyl)sulfanyl]-4-hydroxy-6-(thiophen-3-yl)-5,6-dihydro-2H-pyran-2-one" 
D4S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R})-2-(3-aminophenyl)-5-(2-chlorophenyl)sulfanyl-4-oxidanyl-2-thiophen-3-yl-3~{H}-pyran-6-one"          
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
D4S "Create component" 2017-10-17 RCSB 
D4S "Initial release"  2018-10-24 RCSB 
# 
