data_6HS
#

_chem_comp.id                                   6HS
_chem_comp.name                                 "(1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(hydroxymethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H36 N4 O8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "6'-hydroxysisomicin"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-09-03
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       448.511
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    6HS
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4GPW
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6HS  C11  C11  C  0  1  N  N  S  -10.484   -6.508  11.805   3.052  -0.769   0.460  C11  6HS   1  
6HS  C12  C12  C  0  1  N  N  R   -7.558   -7.649  16.250  -0.733   2.944   0.516  C12  6HS   2  
6HS  C13  C13  C  0  1  N  N  R   -5.108   -9.482  14.485  -2.540   0.249  -1.179  C13  6HS   3  
6HS  C21  C21  C  0  1  N  N  R  -10.306   -5.372  10.724   3.708  -1.860   1.318  C21  6HS   4  
6HS  C22  C22  C  0  1  N  N  N   -9.137   -7.579  16.403   0.718   3.428   0.475  C22  6HS   5  
6HS  C23  C23  C  0  1  N  N  R   -3.675   -9.249  15.041  -4.055   0.029  -1.178  C23  6HS   6  
6HS  C31  C31  C  0  1  N  N  N  -10.988   -4.058  11.250   4.415  -2.845   0.381  C31  6HS   7  
6HS  C32  C32  C  0  1  N  N  S   -9.705   -6.539  15.342   1.606   2.444   1.237  C32  6HS   8  
6HS  C33  C33  C  0  1  N  N  R   -2.957   -8.172  14.120  -4.462  -0.669   0.123  C33  6HS   9  
6HS  C41  C41  C  0  1  N  N  N  -12.434   -4.348  11.827   5.221  -2.080  -0.633  C41  6HS  10  
6HS  C42  C42  C  0  1  N  N  R   -9.307   -6.997  13.886   1.511   1.062   0.587  C42  6HS  11  
6HS  C43  C43  C  0  1  N  N  R   -2.880   -8.746  12.579  -3.683  -1.982   0.249  C43  6HS  12  
6HS  C51  C51  C  0  1  N  N  N  -12.804   -5.597  12.179   5.021  -0.812  -0.877  C51  6HS  13  
6HS  C52  C52  C  0  1  N  N  S   -7.735   -7.061  13.755   0.060   0.577   0.629  C52  6HS  14  
6HS  C53  C53  C  0  1  N  N  N   -4.328   -9.009  12.071  -2.183  -1.685   0.194  C53  6HS  15  
6HS  C61  C61  C  0  1  N  N  N  -14.202   -5.907  12.729   5.877  -0.141  -1.920  C61  6HS  16  
6HS  C62  C62  C  0  1  N  N  S   -7.192   -8.123  14.789  -0.828   1.562  -0.134  C62  6HS  17  
6HS  C83  C83  C  0  1  N  N  N   -2.211   -7.785  11.551  -4.023  -2.652   1.582  C83  6HS  18  
6HS  C93  C93  C  0  1  N  N  N   -1.422   -6.810  15.595  -6.675   0.211   0.557  C93  6HS  19  
6HS  N12  N12  N  0  1  N  N  N   -7.051   -8.585  17.200  -1.586   3.889  -0.216  N12  6HS  20  
6HS  N21  N21  N  0  1  N  N  N   -8.882   -5.153  10.483   4.687  -1.253   2.230  N21  6HS  21  
6HS  N32  N32  N  0  1  N  N  N  -11.167   -6.476  15.460   2.999   2.909   1.197  N32  6HS  22  
6HS  N33  N33  N  0  1  N  N  N   -1.564   -7.913  14.638  -5.903  -0.952   0.099  N33  6HS  23  
6HS  O61  O61  O  0  1  N  N  N  -14.159   -7.142  13.470   5.059   0.267  -3.018  O61  6HS  24  
6HS  O11  O11  O  0  1  N  N  N   -9.809   -6.074  12.990   2.341   0.142   1.300  O11  6HS  25  
6HS  O23  O23  O  0  1  N  N  N   -3.777   -8.806  16.390  -4.720   1.290  -1.271  O23  6HS  26  
6HS  O43  O43  O  0  1  N  N  N   -2.177   -9.976  12.468  -4.038  -2.853  -0.827  O43  6HS  27  
6HS  O51  O51  O  0  1  N  N  N  -11.923   -6.722  12.055   4.085  -0.072  -0.243  O51  6HS  28  
6HS  O52  O52  O  0  1  N  N  N   -7.389   -7.466  12.433  -0.028  -0.713   0.022  O52  6HS  29  
6HS  O53  O53  O  0  1  N  N  N   -5.036   -9.938  13.038  -1.877  -1.008  -1.027  O53  6HS  30  
6HS  O62  O62  O  0  1  N  N  N   -5.801   -8.202  14.647  -2.183   1.110  -0.095  O62  6HS  31  
6HS  H1   H1   H  0  1  N  N  N  -10.030   -7.433  11.419   2.365  -1.225  -0.253  H1   6HS  32  
6HS  H2   H2   H  0  1  N  N  N   -7.138   -6.646  16.418  -1.066   2.882   1.553  H2   6HS  33  
6HS  H3   H3   H  0  1  N  N  N   -5.602  -10.258  15.088  -2.239   0.708  -2.121  H3   6HS  34  
6HS  H4   H4   H  0  1  N  N  N  -10.807   -5.685   9.796   2.944  -2.384   1.894  H4   6HS  35  
6HS  H5   H5   H  0  1  N  N  N   -9.396   -7.250  17.420   1.050   3.491  -0.561  H5   6HS  36  
6HS  H6   H6   H  0  1  N  N  N   -9.572   -8.572  16.217   0.785   4.413   0.938  H6   6HS  37  
6HS  H7   H7   H  0  1  N  N  N   -3.111  -10.192  14.981  -4.333  -0.593  -2.029  H7   6HS  38  
6HS  H8   H8   H  0  1  N  N  N  -10.365   -3.626  12.047   5.076  -3.488   0.962  H8   6HS  39  
6HS  H9   H9   H  0  1  N  N  N  -11.071   -3.341  10.420   3.672  -3.456  -0.132  H9   6HS  40  
6HS  H10  H10  H  0  1  N  N  N   -9.261   -5.552  15.540   1.274   2.382   2.274  H10  6HS  41  
6HS  H11  H11  H  0  1  N  N  N   -3.545   -7.243  14.120  -4.231  -0.024   0.971  H11  6HS  42  
6HS  H12  H12  H  0  1  N  N  N  -13.135   -3.534  11.940   5.996  -2.599  -1.179  H12  6HS  43  
6HS  H13  H13  H  0  1  N  N  N   -9.718   -8.001  13.706   1.844   1.124  -0.449  H13  6HS  44  
6HS  H14  H14  H  0  1  N  N  N   -7.312   -6.074  13.995  -0.272   0.515   1.665  H14  6HS  45  
6HS  H15  H15  H  0  1  N  N  N   -4.875   -8.056  12.009  -1.906  -1.054   1.038  H15  6HS  46  
6HS  H16  H16  H  0  1  N  N  N   -4.289   -9.475  11.075  -1.625  -2.620   0.240  H16  6HS  47  
6HS  H17  H17  H  0  1  N  N  N  -14.525   -5.091  13.393   6.363   0.732  -1.484  H17  6HS  48  
6HS  H18  H18  H  0  1  N  N  N  -14.912   -6.004  11.894   6.635  -0.840  -2.273  H18  6HS  49  
6HS  H19  H19  H  0  1  N  N  N   -7.674   -9.092  14.595  -0.495   1.624  -1.170  H19  6HS  50  
6HS  H20  H20  H  0  1  N  N  N   -1.180   -7.568  11.868  -5.093  -2.858   1.623  H20  6HS  51  
6HS  H21  H21  H  0  1  N  N  N   -2.197   -8.261  10.559  -3.469  -3.586   1.671  H21  6HS  52  
6HS  H22  H22  H  0  1  N  N  N   -2.784   -6.847  11.499  -3.750  -1.988   2.402  H22  6HS  53  
6HS  H23  H23  H  0  1  N  N  N   -0.368   -6.720  15.898  -6.385   0.461   1.577  H23  6HS  54  
6HS  H24  H24  H  0  1  N  N  N   -1.749   -5.871  15.124  -6.475   1.060  -0.097  H24  6HS  55  
6HS  H25  H25  H  0  1  N  N  N   -2.042   -7.011  16.481  -7.739  -0.026   0.529  H25  6HS  56  
6HS  H26  H26  H  0  1  N  N  N   -7.284   -8.282  18.124  -1.541   4.810   0.194  H26  6HS  57  
6HS  H27  H27  H  0  1  N  N  N   -7.456   -9.484  17.031  -1.339   3.917  -1.194  H27  6HS  58  
6HS  H29  H29  H  0  1  N  N  N   -8.466   -5.999  10.149   5.145  -1.956   2.789  H29  6HS  59  
6HS  H30  H30  H  0  1  N  N  N   -8.767   -4.433   9.799   5.360  -0.701   1.720  H30  6HS  60  
6HS  H32  H32  H  0  1  N  N  N  -11.415   -6.185  16.384   3.088   3.820   1.621  H32  6HS  61  
6HS  H33  H33  H  0  1  N  N  N  -11.527   -5.820  14.797   3.615   2.243   1.639  H33  6HS  62  
6HS  H35  H35  H  0  1  N  N  N   -1.245   -8.748  15.086  -6.199  -1.244  -0.820  H35  6HS  63  
6HS  H37  H37  H  0  1  N  N  N  -15.024   -7.337  13.812   5.545   0.708  -3.728  H37  6HS  64  
6HS  H38  H38  H  0  1  N  N  N   -4.210   -9.472  16.911  -4.505   1.791  -2.071  H38  6HS  65  
6HS  H39  H39  H  0  1  N  N  N   -2.544  -10.607  13.076  -3.581  -3.705  -0.811  H39  6HS  66  
6HS  H40  H40  H  0  1  N  N  N   -6.443   -7.506  12.351   0.453  -1.405   0.496  H40  6HS  67  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6HS  N21  C21  SING  N  N   1  
6HS  C21  C31  SING  N  N   2  
6HS  C21  C11  SING  N  N   3  
6HS  C31  C41  SING  N  N   4  
6HS  C83  C43  SING  N  N   5  
6HS  C11  O51  SING  N  N   6  
6HS  C11  O11  SING  N  N   7  
6HS  C41  C51  DOUB  N  N   8  
6HS  O51  C51  SING  N  N   9  
6HS  C53  C43  SING  N  N  10  
6HS  C53  O53  SING  N  N  11  
6HS  C51  C61  SING  N  N  12  
6HS  O52  C52  SING  N  N  13  
6HS  O43  C43  SING  N  N  14  
6HS  C43  C33  SING  N  N  15  
6HS  C61  O61  SING  N  N  16  
6HS  O11  C42  SING  N  N  17  
6HS  O53  C13  SING  N  N  18  
6HS  C52  C42  SING  N  N  19  
6HS  C52  C62  SING  N  N  20  
6HS  C42  C32  SING  N  N  21  
6HS  C33  N33  SING  N  N  22  
6HS  C33  C23  SING  N  N  23  
6HS  C13  O62  SING  N  N  24  
6HS  C13  C23  SING  N  N  25  
6HS  N33  C93  SING  N  N  26  
6HS  O62  C62  SING  N  N  27  
6HS  C62  C12  SING  N  N  28  
6HS  C23  O23  SING  N  N  29  
6HS  C32  N32  SING  N  N  30  
6HS  C32  C22  SING  N  N  31  
6HS  C12  C22  SING  N  N  32  
6HS  C12  N12  SING  N  N  33  
6HS  C11  H1   SING  N  N  34  
6HS  C12  H2   SING  N  N  35  
6HS  C13  H3   SING  N  N  36  
6HS  C21  H4   SING  N  N  37  
6HS  C22  H5   SING  N  N  38  
6HS  C22  H6   SING  N  N  39  
6HS  C23  H7   SING  N  N  40  
6HS  C31  H8   SING  N  N  41  
6HS  C31  H9   SING  N  N  42  
6HS  C32  H10  SING  N  N  43  
6HS  C33  H11  SING  N  N  44  
6HS  C41  H12  SING  N  N  45  
6HS  C42  H13  SING  N  N  46  
6HS  C52  H14  SING  N  N  47  
6HS  C53  H15  SING  N  N  48  
6HS  C53  H16  SING  N  N  49  
6HS  C61  H17  SING  N  N  50  
6HS  C61  H18  SING  N  N  51  
6HS  C62  H19  SING  N  N  52  
6HS  C83  H20  SING  N  N  53  
6HS  C83  H21  SING  N  N  54  
6HS  C83  H22  SING  N  N  55  
6HS  C93  H23  SING  N  N  56  
6HS  C93  H24  SING  N  N  57  
6HS  C93  H25  SING  N  N  58  
6HS  N12  H26  SING  N  N  59  
6HS  N12  H27  SING  N  N  60  
6HS  N21  H29  SING  N  N  61  
6HS  N21  H30  SING  N  N  62  
6HS  N32  H32  SING  N  N  63  
6HS  N32  H33  SING  N  N  64  
6HS  N33  H35  SING  N  N  65  
6HS  O61  H37  SING  N  N  66  
6HS  O23  H38  SING  N  N  67  
6HS  O43  H39  SING  N  N  68  
6HS  O52  H40  SING  N  N  69  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6HS  SMILES            ACDLabs               12.01  "O(C2C(O)C(OC1OC(=CCC1N)CO)C(N)CC2N)C3OCC(O)(C(NC)C3O)C"  
6HS  InChI             InChI                 1.03   "InChI=1S/C19H36N4O8/c1-19(27)7-28-18(13(26)16(19)23-2)31-15-11(22)5-10(21)14(12(15)25)30-17-9(20)4-3-8(6-24)29-17/h3,9-18,23-27H,4-7,20-22H2,1-2H3/t9-,10+,11-,12+,13-,14-,15+,16-,17-,18-,19+/m1/s1"  
6HS  InChIKey          InChI                 1.03   IZDCJSIPHXBXBL-YFMIWBNJSA-N  
6HS  SMILES_CANONICAL  CACTVS                3.370  "CN[C@@H]1[C@@H](O)[C@H](OC[C@]1(C)O)O[C@H]2[C@H](N)C[C@H](N)[C@@H](O[C@H]3OC(=CC[C@H]3N)CO)[C@@H]2O"  
6HS  SMILES            CACTVS                3.370  "CN[CH]1[CH](O)[CH](OC[C]1(C)O)O[CH]2[CH](N)C[CH](N)[CH](O[CH]3OC(=CC[CH]3N)CO)[CH]2O"  
6HS  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C[C@@]1(CO[C@@H]([C@@H]([C@H]1NC)O)O[C@H]2[C@@H](C[C@@H]([C@H]([C@@H]2O)O[C@@H]3[C@@H](CC=C(O3)CO)N)N)N)O"  
6HS  SMILES            "OpenEye OEToolkits"  1.7.6  "CC1(COC(C(C1NC)O)OC2C(CC(C(C2O)OC3C(CC=C(O3)CO)N)N)N)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
6HS  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(hydroxymethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside"  
6HS  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R,3R,4R,5R)-2-[(1S,2S,3R,4S,6R)-4,6-bis(azanyl)-3-[[(2S,3R)-3-azanyl-6-(hydroxymethyl)-3,4-dihydro-2H-pyran-2-yl]oxy]-2-oxidanyl-cyclohexyl]oxy-5-methyl-4-(methylamino)oxane-3,5-diol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6HS  "Create component"  2012-09-03  PDBJ  
6HS  "Initial release"   2013-04-03  RCSB  
6HS  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     6HS
_pdbx_chem_comp_synonyms.name        "6'-hydroxysisomicin"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
