data_5YS
# 
_chem_comp.id                                    5YS 
_chem_comp.name                                  "~{N}-[(1~{R})-1-(3-methoxyphenyl)ethyl]-4-pyridin-4-yl-piperidine-1-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H25 N3 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-07-19 
_chem_comp.pdbx_modified_date                    2022-07-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        339.431 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5YS 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7P6N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5YS C2  C1  C 0 1 N N N 82.025 40.390 18.156 -0.172 2.039  -0.351 C2  5YS 1  
5YS C4  C2  C 0 1 N N R 80.752 41.314 16.296 -2.562 1.570  -0.295 C4  5YS 2  
5YS C6  C3  C 0 1 N N N 80.462 40.915 14.854 -3.200 2.869  0.203  C6  5YS 3  
5YS C7  C4  C 0 1 Y N N 81.556 42.577 16.306 -3.401 0.398  0.147  C7  5YS 4  
5YS C8  C5  C 0 1 Y N N 82.926 42.545 16.262 -3.295 -0.079 1.440  C8  5YS 5  
5YS C11 C6  C 0 1 Y N N 81.590 44.967 16.374 -5.046 -1.278 -0.335 C11 5YS 6  
5YS C16 C7  C 0 1 N N N 82.846 37.769 18.042 1.320  1.061  1.326  C16 5YS 7  
5YS C17 C8  C 0 1 N N N 84.285 37.282 18.159 2.315  -0.062 1.015  C17 5YS 8  
5YS C18 C9  C 0 1 N N N 84.657 37.196 19.636 3.579  0.539  0.396  C18 5YS 9  
5YS C19 C10 C 0 1 N N N 84.812 38.616 20.174 3.221  1.243  -0.915 C19 5YS 10 
5YS C21 C11 C 0 1 Y N N 85.945 36.439 19.856 4.574  -0.559 0.120  C21 5YS 11 
5YS C23 C12 C 0 1 Y N N 87.876 35.257 19.077 5.198  -2.591 -0.967 C23 5YS 12 
5YS O1  O1  O 0 1 N N N 81.958 41.448 18.730 -0.363 2.756  -1.314 O1  5YS 13 
5YS N3  N1  N 0 1 N N N 81.469 40.228 16.951 -1.214 1.444  0.263  N3  5YS 14 
5YS C9  C13 C 0 1 Y N N 83.622 43.732 16.273 -4.062 -1.154 1.848  C9  5YS 15 
5YS C10 C14 C 0 1 Y N N 82.964 44.937 16.331 -4.938 -1.754 0.964  C10 5YS 16 
5YS O12 O2  O 0 1 N N N 80.969 46.172 16.429 -5.906 -1.866 -1.206 O12 5YS 17 
5YS C13 C15 C 0 1 N N N 79.543 46.276 16.477 -6.669 -2.972 -0.719 C13 5YS 18 
5YS C14 C16 C 0 1 Y N N 80.893 43.775 16.360 -4.278 -0.195 -0.740 C14 5YS 19 
5YS N15 N2  N 0 1 N N N 82.742 39.215 18.791 1.082  1.834  0.099  N15 5YS 20 
5YS C20 C17 C 0 1 N N N 83.451 39.313 20.252 2.236  2.381  -0.627 C20 5YS 21 
5YS C22 C18 C 0 1 Y N N 86.708 35.938 18.816 4.260  -1.602 -0.738 C22 5YS 22 
5YS N24 N3  N 0 1 Y N N 88.279 35.075 20.310 6.378  -2.551 -0.379 N24 5YS 23 
5YS C25 C19 C 0 1 Y N N 87.586 35.533 21.325 6.712  -1.572 0.438  C25 5YS 24 
5YS C26 C20 C 0 1 Y N N 86.409 36.221 21.136 5.826  -0.548 0.715  C26 5YS 25 
5YS H1  H1  H 0 1 N N N 79.797 41.491 16.813 -2.505 1.587  -1.383 H1  5YS 26 
5YS H2  H2  H 0 1 N N N 79.871 39.987 14.841 -4.204 2.963  -0.212 H2  5YS 27 
5YS H3  H3  H 0 1 N N N 79.895 41.717 14.359 -3.257 2.852  1.291  H3  5YS 28 
5YS H4  H4  H 0 1 N N N 81.410 40.753 14.321 -2.594 3.717  -0.116 H4  5YS 29 
5YS H5  H5  H 0 1 N N N 83.451 41.602 16.219 -2.611 0.389  2.133  H5  5YS 30 
5YS H6  H6  H 0 1 N N N 82.573 37.877 16.982 0.381  0.631  1.675  H6  5YS 31 
5YS H7  H7  H 0 1 N N N 82.168 37.049 18.524 1.734  1.714  2.095  H7  5YS 32 
5YS H8  H8  H 0 1 N N N 84.378 36.288 17.696 2.574  -0.583 1.937  H8  5YS 33 
5YS H9  H9  H 0 1 N N N 84.957 37.988 17.649 1.864  -0.764 0.314  H9  5YS 34 
5YS H10 H10 H 0 1 N N N 83.844 36.693 20.181 4.016  1.259  1.087  H10 5YS 35 
5YS H11 H11 H 0 1 N N N 85.256 38.575 21.180 4.125  1.650  -1.368 H11 5YS 36 
5YS H12 H12 H 0 1 N N N 85.473 39.186 19.505 2.761  0.529  -1.598 H12 5YS 37 
5YS H13 H13 H 0 1 N N N 88.465 34.870 18.258 4.959  -3.409 -1.630 H13 5YS 38 
5YS H14 H14 H 0 1 N N N 81.547 39.344 16.490 -1.071 0.932  1.074  H14 5YS 39 
5YS H15 H15 H 0 1 N N N 84.701 43.716 16.236 -3.978 -1.525 2.859  H15 5YS 40 
5YS H16 H16 H 0 1 N N N 83.525 45.860 16.343 -5.537 -2.594 1.283  H16 5YS 41 
5YS H17 H17 H 0 1 N N N 79.253 47.336 16.517 -5.994 -3.764 -0.394 H17 5YS 42 
5YS H18 H18 H 0 1 N N N 79.111 45.812 15.578 -7.281 -2.648 0.123  H18 5YS 43 
5YS H19 H19 H 0 1 N N N 79.168 45.759 17.373 -7.314 -3.347 -1.513 H19 5YS 44 
5YS H20 H20 H 0 1 N N N 79.814 43.787 16.392 -4.364 0.181  -1.749 H20 5YS 45 
5YS H21 H21 H 0 1 N N N 83.589 40.369 20.528 2.725  3.141  -0.017 H21 5YS 46 
5YS H22 H22 H 0 1 N N N 82.821 38.816 21.005 1.902  2.822  -1.566 H22 5YS 47 
5YS H23 H23 H 0 1 N N N 86.386 36.082 17.795 3.295  -1.641 -1.222 H23 5YS 48 
5YS H24 H24 H 0 1 N N N 87.946 35.367 22.330 7.688  -1.573 0.901  H24 5YS 49 
5YS H25 H25 H 0 1 N N N 85.852 36.588 21.985 6.106  0.252  1.385  H25 5YS 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5YS C6  C4  SING N N 1  
5YS C8  C9  DOUB Y N 2  
5YS C8  C7  SING Y N 3  
5YS C9  C10 SING Y N 4  
5YS C4  C7  SING N N 5  
5YS C4  N3  SING N N 6  
5YS C7  C14 DOUB Y N 7  
5YS C10 C11 DOUB Y N 8  
5YS C14 C11 SING Y N 9  
5YS C11 O12 SING N N 10 
5YS O12 C13 SING N N 11 
5YS N3  C2  SING N N 12 
5YS C16 C17 SING N N 13 
5YS C16 N15 SING N N 14 
5YS C2  O1  DOUB N N 15 
5YS C2  N15 SING N N 16 
5YS C17 C18 SING N N 17 
5YS N15 C20 SING N N 18 
5YS C22 C23 DOUB Y N 19 
5YS C22 C21 SING Y N 20 
5YS C23 N24 SING Y N 21 
5YS C18 C21 SING N N 22 
5YS C18 C19 SING N N 23 
5YS C21 C26 DOUB Y N 24 
5YS C19 C20 SING N N 25 
5YS N24 C25 DOUB Y N 26 
5YS C26 C25 SING Y N 27 
5YS C4  H1  SING N N 28 
5YS C6  H2  SING N N 29 
5YS C6  H3  SING N N 30 
5YS C6  H4  SING N N 31 
5YS C8  H5  SING N N 32 
5YS C16 H6  SING N N 33 
5YS C16 H7  SING N N 34 
5YS C17 H8  SING N N 35 
5YS C17 H9  SING N N 36 
5YS C18 H10 SING N N 37 
5YS C19 H11 SING N N 38 
5YS C19 H12 SING N N 39 
5YS C23 H13 SING N N 40 
5YS N3  H14 SING N N 41 
5YS C9  H15 SING N N 42 
5YS C10 H16 SING N N 43 
5YS C13 H17 SING N N 44 
5YS C13 H18 SING N N 45 
5YS C13 H19 SING N N 46 
5YS C14 H20 SING N N 47 
5YS C20 H21 SING N N 48 
5YS C20 H22 SING N N 49 
5YS C22 H23 SING N N 50 
5YS C25 H24 SING N N 51 
5YS C26 H25 SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5YS InChI            InChI                1.03  "InChI=1S/C20H25N3O2/c1-15(18-4-3-5-19(14-18)25-2)22-20(24)23-12-8-17(9-13-23)16-6-10-21-11-7-16/h3-7,10-11,14-15,17H,8-9,12-13H2,1-2H3,(H,22,24)/t15-/m1/s1" 
5YS InChIKey         InChI                1.03  TUPUYLLHTGZRRB-OAHLLOKOSA-N                                                                                                                                   
5YS SMILES_CANONICAL CACTVS               3.385 "COc1cccc(c1)[C@@H](C)NC(=O)N2CCC(CC2)c3ccncc3"                                                                                                               
5YS SMILES           CACTVS               3.385 "COc1cccc(c1)[CH](C)NC(=O)N2CCC(CC2)c3ccncc3"                                                                                                                 
5YS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1cccc(c1)OC)NC(=O)N2CCC(CC2)c3ccncc3"                                                                                                                
5YS SMILES           "OpenEye OEToolkits" 2.0.7 "CC(c1cccc(c1)OC)NC(=O)N2CCC(CC2)c3ccncc3"                                                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           5YS 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[(1~{R})-1-(3-methoxyphenyl)ethyl]-4-pyridin-4-yl-piperidine-1-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5YS "Create component" 2021-07-19 PDBE 
5YS "Initial release"  2022-07-27 RCSB 
# 
