data_ZIR
# 
_chem_comp.id                                    ZIR 
_chem_comp.name                                  "N-(3-methylbut-2-en-1-yl)adenosine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H21 N5 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-05-23 
_chem_comp.pdbx_modified_date                    2012-05-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        335.358 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ZIR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3S1C 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ZIR N1     N1     N 0 1 Y N N -35.954 8.312  -2.629 2.408  -1.511 -1.009 N1     ZIR 1  
ZIR C2     C2     C 0 1 Y N N -35.759 9.449  -2.061 1.328  -2.234 -1.242 C2     ZIR 2  
ZIR N3     N3     N 0 1 Y N N -36.456 10.509 -2.442 0.112  -1.775 -1.034 N3     ZIR 3  
ZIR C4     C4     C 0 1 Y N N -37.409 10.506 -3.377 -0.077 -0.543 -0.572 C4     ZIR 4  
ZIR C5     C5     C 0 1 Y N N -37.662 9.312  -3.966 1.040  0.266  -0.308 C5     ZIR 5  
ZIR C6     C6     C 0 1 Y N N -36.901 8.215  -3.564 2.318  -0.269 -0.546 C6     ZIR 6  
ZIR N7     N7     N 0 1 Y N N -38.618 9.520  -4.854 0.574  1.454  0.146  N7     ZIR 7  
ZIR C8     C8     C 0 1 Y N N -38.938 10.765 -4.791 -0.727 1.426  0.177  C8     ZIR 8  
ZIR N9     N9     N 0 1 Y N N -38.213 11.402 -3.901 -1.177 0.215  -0.257 N9     ZIR 9  
ZIR "C1'"  "C1'"  C 0 1 N N R -38.356 12.917 -3.546 -2.577 -0.201 -0.368 "C1'"  ZIR 10 
ZIR N10    N10    N 0 1 N N N -37.109 7.040  -4.075 3.455  0.481  -0.304 N10    ZIR 11 
ZIR C11    C11    C 0 1 N N N -37.122 5.849  -3.251 4.779  -0.093 -0.558 C11    ZIR 12 
ZIR C12    C12    C 0 1 N N N -37.923 4.851  -3.732 5.840  0.921  -0.216 C12    ZIR 13 
ZIR C13    C13    C 0 1 N N N -37.837 3.575  -3.203 6.813  0.600  0.601  C13    ZIR 14 
ZIR C14    C14    C 0 1 N N N -38.667 2.433  -3.738 7.776  1.657  1.078  C14    ZIR 15 
ZIR C15    C15    C 0 1 N N N -36.817 3.376  -2.086 6.969  -0.826 1.064  C15    ZIR 16 
ZIR "C2'"  "C2'"  C 0 1 N N R -38.156 14.028 -4.590 -3.035 -0.898 0.932  "C2'"  ZIR 17 
ZIR "O2'"  "O2'"  O 0 1 N N N -36.797 14.381 -4.619 -2.979 -2.318 0.786  "O2'"  ZIR 18 
ZIR "C3'"  "C3'"  C 0 1 N N S -39.088 15.172 -4.143 -4.497 -0.430 1.114  "C3'"  ZIR 19 
ZIR "O3'"  "O3'"  O 0 1 N N N -38.612 15.979 -3.074 -5.387 -1.546 1.086  "O3'"  ZIR 20 
ZIR "C4'"  "C4'"  C 0 1 N N R -40.258 14.385 -3.665 -4.748 0.495  -0.098 "C4'"  ZIR 21 
ZIR "O4'"  "O4'"  O 0 1 N N N -39.709 13.197 -3.092 -3.436 0.953  -0.491 "O4'"  ZIR 22 
ZIR "C5'"  "C5'"  C 0 1 N N N -41.110 14.080 -4.899 -5.627 1.679  0.309  "C5'"  ZIR 23 
ZIR "O5'"  "O5'"  O 0 1 N N N -42.319 14.863 -4.825 -5.943 2.457  -0.847 "O5'"  ZIR 24 
ZIR H2     H2     H 0 1 N N N -35.026 9.540  -1.273 1.447  -3.240 -1.618 H2     ZIR 25 
ZIR H8     H8     H 0 1 N N N -39.706 11.227 -5.394 -1.357 2.242  0.498  H8     ZIR 26 
ZIR "H1'"  "H1'"  H 0 1 N N N -37.514 12.982 -2.841 -2.709 -0.865 -1.223 "H1'"  ZIR 27 
ZIR HN10   HN10   H 0 0 N N N -38.014 7.086  -4.497 3.376  1.387  0.034  HN10   ZIR 28 
ZIR H11    H11    H 0 1 N N N -36.094 5.463  -3.195 4.914  -0.982 0.057  H11    ZIR 29 
ZIR H11A   H11A   H 0 0 N N N -37.490 6.130  -2.253 4.861  -0.363 -1.611 H11A   ZIR 30 
ZIR H12    H12    H 0 1 N N N -38.624 5.059  -4.527 5.799  1.911  -0.644 H12    ZIR 31 
ZIR H14    H14    H 0 1 N N N -38.439 1.517  -3.173 7.398  2.105  1.996  H14    ZIR 32 
ZIR H14A   H14A   H 0 0 N N N -39.735 2.674  -3.630 8.748  1.202  1.269  H14A   ZIR 33 
ZIR H14B   H14B   H 0 0 N N N -38.432 2.276  -4.801 7.879  2.426  0.313  H14B   ZIR 34 
ZIR H15    H15    H 0 1 N N N -36.841 2.329  -1.749 6.249  -1.457 0.544  H15    ZIR 35 
ZIR H15A   H15A   H 0 0 N N N -35.811 3.618  -2.461 7.979  -1.171 0.845  H15A   ZIR 36 
ZIR H15B   H15B   H 0 0 N N N -37.063 4.038  -1.243 6.792  -0.880 2.138  H15B   ZIR 37 
ZIR "H2'"  "H2'"  H 0 1 N N N -38.409 13.734 -5.619 -2.423 -0.575 1.775  "H2'"  ZIR 38 
ZIR "HO2'" "HO2'" H 0 0 N N N -36.661 15.068 -5.261 -3.257 -2.806 1.573  "HO2'" ZIR 39 
ZIR "H3'"  "H3'"  H 0 1 N N N -39.247 15.899 -4.953 -4.607 0.124  2.046  "H3'"  ZIR 40 
ZIR "HO3'" "HO3'" H 0 0 N N N -39.253 16.651 -2.874 -6.319 -1.309 1.196  "HO3'" ZIR 41 
ZIR "H4'"  "H4'"  H 0 1 N N N -40.885 14.899 -2.922 -5.214 -0.063 -0.910 "H4'"  ZIR 42 
ZIR "H5'"  "H5'"  H 0 1 N N N -40.552 14.341 -5.811 -6.547 1.311  0.762  "H5'"  ZIR 43 
ZIR "H5'A" "H5'A" H 0 0 N N N -41.360 13.009 -4.923 -5.091 2.299  1.028  "H5'A" ZIR 44 
ZIR "HO5'" "HO5'" H 0 0 N N N -42.860 14.684 -5.586 -6.499 3.227  -0.664 "HO5'" ZIR 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ZIR C6    N1     DOUB Y N 1  
ZIR N1    C2     SING Y N 2  
ZIR N3    C2     DOUB Y N 3  
ZIR C2    H2     SING N N 4  
ZIR C4    N3     SING Y N 5  
ZIR C5    C4     DOUB Y N 6  
ZIR N9    C4     SING Y N 7  
ZIR N7    C5     SING Y N 8  
ZIR C5    C6     SING Y N 9  
ZIR N10   C6     SING N N 10 
ZIR N7    C8     DOUB Y N 11 
ZIR C8    N9     SING Y N 12 
ZIR C8    H8     SING N N 13 
ZIR N9    "C1'"  SING N N 14 
ZIR "C2'" "C1'"  SING N N 15 
ZIR "C1'" "O4'"  SING N N 16 
ZIR "C1'" "H1'"  SING N N 17 
ZIR N10   C11    SING N N 18 
ZIR N10   HN10   SING N N 19 
ZIR C12   C11    SING N N 20 
ZIR C11   H11    SING N N 21 
ZIR C11   H11A   SING N N 22 
ZIR C12   C13    DOUB N N 23 
ZIR C12   H12    SING N N 24 
ZIR C14   C13    SING N N 25 
ZIR C13   C15    SING N N 26 
ZIR C14   H14    SING N N 27 
ZIR C14   H14A   SING N N 28 
ZIR C14   H14B   SING N N 29 
ZIR C15   H15    SING N N 30 
ZIR C15   H15A   SING N N 31 
ZIR C15   H15B   SING N N 32 
ZIR "O2'" "C2'"  SING N N 33 
ZIR "C2'" "C3'"  SING N N 34 
ZIR "C2'" "H2'"  SING N N 35 
ZIR "O2'" "HO2'" SING N N 36 
ZIR "C3'" "C4'"  SING N N 37 
ZIR "C3'" "O3'"  SING N N 38 
ZIR "C3'" "H3'"  SING N N 39 
ZIR "O3'" "HO3'" SING N N 40 
ZIR "C5'" "C4'"  SING N N 41 
ZIR "C4'" "O4'"  SING N N 42 
ZIR "C4'" "H4'"  SING N N 43 
ZIR "C5'" "O5'"  SING N N 44 
ZIR "C5'" "H5'"  SING N N 45 
ZIR "C5'" "H5'A" SING N N 46 
ZIR "O5'" "HO5'" SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ZIR SMILES           ACDLabs              12.01 "n2c1c(ncnc1n(c2)C3OC(C(O)C3O)CO)NC\C=C(/C)C"                                                                                                                          
ZIR SMILES_CANONICAL CACTVS               3.370 "CC(C)=CCNc1ncnc2n(cnc12)[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O"                                                                                                            
ZIR SMILES           CACTVS               3.370 "CC(C)=CCNc1ncnc2n(cnc12)[CH]3O[CH](CO)[CH](O)[CH]3O"                                                                                                                  
ZIR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CC(=CCNc1c2c(ncn1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)C"                                                                                                        
ZIR SMILES           "OpenEye OEToolkits" 1.7.2 "CC(=CCNc1c2c(ncn1)n(cn2)C3C(C(C(O3)CO)O)O)C"                                                                                                                          
ZIR InChI            InChI                1.03  "InChI=1S/C15H21N5O4/c1-8(2)3-4-16-13-10-14(18-6-17-13)20(7-19-10)15-12(23)11(22)9(5-21)24-15/h3,6-7,9,11-12,15,21-23H,4-5H2,1-2H3,(H,16,17,18)/t9-,11-,12-,15-/m1/s1" 
ZIR InChIKey         InChI                1.03  USVMJSALORZVDV-SDBHATRESA-N                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ZIR "SYSTEMATIC NAME" ACDLabs              12.01 "N-(3-methylbut-2-en-1-yl)adenosine"                                                        
ZIR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2R,3S,4R,5R)-2-(hydroxymethyl)-5-[6-(3-methylbut-2-enylamino)purin-9-yl]oxolane-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ZIR "Create component"     2011-05-23 RCSB 
ZIR "Modify aromatic_flag" 2011-06-04 RCSB 
ZIR "Modify descriptor"    2011-06-04 RCSB 
# 
