data_ZDR
# 
_chem_comp.id                                    ZDR 
_chem_comp.name                                  "(2R,6S)-2,6-DIAMINO-2-METHYLHEPTANEDIOIC ACID" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H16 N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2006-04-13 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        204.224 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ZDR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2GKJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ZDR CAN  CAN  C 0 1 N N N N N N 21.696 12.783 9.984  2.361  0.207  -1.776 CAN  ZDR 1  
ZDR CAT  CAT  C 0 1 N N R N N N 23.100 13.411 9.971  2.329  0.232  -0.246 CAT  ZDR 2  
ZDR NAC  NAC  N 0 1 N N N N N N 23.921 12.544 9.228  2.366  1.624  0.222  NAC  ZDR 3  
ZDR CAQ  CAQ  C 0 1 N N N N N N 23.582 13.544 11.344 3.523  -0.512 0.294  CAQ  ZDR 4  
ZDR OAF  OAF  O 0 1 N N N N N N 23.614 14.628 11.984 4.699  0.119  0.437  OAF  ZDR 5  
ZDR OAH  OAH  O 0 1 N N N N N N 24.040 12.487 11.844 3.422  -1.677 0.598  OAH  ZDR 6  
ZDR CAM  CAM  C 0 1 N N N N N N 22.993 14.742 9.327  1.044  -0.438 0.247  CAM  ZDR 7  
ZDR CAJ  CAJ  C 0 1 N N N N N N 23.554 14.847 7.896  -0.168 0.317  -0.301 CAJ  ZDR 8  
ZDR CAK  CAK  C 0 1 N N N N N N 23.360 16.250 7.282  -1.452 -0.352 0.193  CAK  ZDR 9  
ZDR CAS  CAS  C 0 1 N N S N N N 21.962 16.503 6.706  -2.664 0.403  -0.355 CAS  ZDR 10 
ZDR NAB  NAB  N 0 1 N N N N N N 21.703 15.643 5.571  -2.692 1.759  0.208  NAB  ZDR 11 
ZDR CAP  CAP  C 0 1 N N N N N N 21.849 17.929 6.214  -3.926 -0.326 0.029  CAP  ZDR 12 
ZDR OAE  OAE  O 0 1 N N N N N N 21.846 18.829 7.074  -4.320 -1.401 -0.673 OAE  ZDR 13 
ZDR OAG  OAG  O 0 1 N N N N N N 21.781 18.194 4.984  -4.583 0.056  0.968  OAG  ZDR 14 
ZDR HAN1 1HAN H 0 0 N N N N N N 21.370 12.633 11.024 3.276  0.684  -2.128 HAN1 ZDR 15 
ZDR HAN2 2HAN H 0 0 N N N N N N 20.990 13.453 9.472  2.333  -0.826 -2.123 HAN2 ZDR 16 
ZDR HAN3 3HAN H 0 0 N N N N N N 21.724 11.813 9.465  1.497  0.745  -2.167 HAN3 ZDR 17 
ZDR HAC1 1HAC H 0 0 N N N N N N 24.116 12.952 8.336  2.345  1.667  1.230  HAC1 ZDR 18 
ZDR HAC2 2HAC H 0 0 N N N N N N 24.778 12.394 9.720  3.173  2.107  -0.145 HAC2 ZDR 19 
ZDR HOAF HOAF H 0 0 N N N N N N 24.016 14.484 12.832 5.436  -0.399 0.787  HOAF ZDR 20 
ZDR HAM1 1HAM H 0 0 N N N N N N 21.924 14.999 9.280  1.017  -1.471 -0.100 HAM1 ZDR 21 
ZDR HAM2 2HAM H 0 0 N N N N N N 23.603 15.422 9.940  1.021  -0.420 1.337  HAM2 ZDR 22 
ZDR HAJ1 1HAJ H 0 0 N N N N N N 24.631 14.628 7.928  -0.140 1.350  0.046  HAJ1 ZDR 23 
ZDR HAJ2 2HAJ H 0 0 N N N N N N 23.006 14.129 7.269  -0.145 0.299  -1.390 HAJ2 ZDR 24 
ZDR HAK1 1HAK H 0 0 N N N N N N 23.537 16.992 8.074  -1.480 -1.385 -0.154 HAK1 ZDR 25 
ZDR HAK2 2HAK H 0 0 N N N N N N 24.067 16.328 6.443  -1.475 -0.335 1.283  HAK2 ZDR 26 
ZDR HAS  HAS  H 0 1 N N N N N N 21.240 16.302 7.511  -2.595 0.462  -1.442 HAS  ZDR 27 
ZDR HAB1 1HAB H 0 0 N N N N N N 21.643 16.196 4.740  -2.756 1.731  1.214  HAB1 ZDR 28 
ZDR HAB2 2HAB H 0 0 N N N N N N 22.447 14.981 5.478  -1.887 2.290  -0.089 HAB2 ZDR 29 
ZDR HOAE HOAE H 0 0 N N N N N N 21.787 19.676 6.647  -5.136 -1.836 -0.389 HOAE ZDR 30 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ZDR CAN CAT  SING N N 1  
ZDR CAN HAN1 SING N N 2  
ZDR CAN HAN2 SING N N 3  
ZDR CAN HAN3 SING N N 4  
ZDR CAT NAC  SING N N 5  
ZDR CAT CAQ  SING N N 6  
ZDR CAT CAM  SING N N 7  
ZDR NAC HAC1 SING N N 8  
ZDR NAC HAC2 SING N N 9  
ZDR CAQ OAF  SING N N 10 
ZDR CAQ OAH  DOUB N N 11 
ZDR OAF HOAF SING N N 12 
ZDR CAM CAJ  SING N N 13 
ZDR CAM HAM1 SING N N 14 
ZDR CAM HAM2 SING N N 15 
ZDR CAJ CAK  SING N N 16 
ZDR CAJ HAJ1 SING N N 17 
ZDR CAJ HAJ2 SING N N 18 
ZDR CAK CAS  SING N N 19 
ZDR CAK HAK1 SING N N 20 
ZDR CAK HAK2 SING N N 21 
ZDR CAS NAB  SING N N 22 
ZDR CAS CAP  SING N N 23 
ZDR CAS HAS  SING N N 24 
ZDR NAB HAB1 SING N N 25 
ZDR NAB HAB2 SING N N 26 
ZDR CAP OAE  SING N N 27 
ZDR CAP OAG  DOUB N N 28 
ZDR OAE HOAE SING N N 29 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ZDR SMILES           ACDLabs              10.04 "O=C(O)C(N)(CCCC(N)C(=O)O)C"                                                                              
ZDR InChI            InChI                1.03  "InChI=1S/C8H16N2O4/c1-8(10,7(13)14)4-2-3-5(9)6(11)12/h5H,2-4,9-10H2,1H3,(H,11,12)(H,13,14)/t5-,8+/m0/s1" 
ZDR InChIKey         InChI                1.03  TVZGBXIJPFGQBJ-YLWLKBPMSA-N                                                                               
ZDR SMILES_CANONICAL CACTVS               3.385 "C[C@@](N)(CCC[C@H](N)C(O)=O)C(O)=O"                                                                      
ZDR SMILES           CACTVS               3.385 "C[C](N)(CCC[CH](N)C(O)=O)C(O)=O"                                                                         
ZDR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.5 "C[C@@](CCC[C@@H](C(=O)O)N)(C(=O)O)N"                                                                     
ZDR SMILES           "OpenEye OEToolkits" 1.7.5 "CC(CCCC(C(=O)O)N)(C(=O)O)N"                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ZDR "SYSTEMATIC NAME" ACDLabs              10.04 "(2R,6S)-2,6-diamino-2-methylheptanedioic acid"  
ZDR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,6S)-2,6-diamino-2-methyl-heptanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ZDR "Create component"   2006-04-13 EBI  
ZDR "Modify descriptor"  2011-06-04 RCSB 
ZDR "Modify descriptor"  2012-01-05 RCSB 
ZDR "Modify coordinates" 2012-01-05 RCSB 
ZDR "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            ZDR 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               CAN 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
