data_USR
# 
_chem_comp.id                                    USR 
_chem_comp.name                                  "methyl 3-O-[3,5-dideoxy-5-(2-hydroxyacetamido)-L-glycero-alpha-D-gulo-non-2-ulopyranonosyl]-beta-D-talopyranoside" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H31 N O15" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-06 
_chem_comp.pdbx_modified_date                    2024-05-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        501.436 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     USR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8ST6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
USR C01  C1  C 0 1 N N R N N N 5.947  -8.058  -10.871 1.962  -1.825 -0.027 C01  USR 1  
USR C02  C2  C 0 1 N N S N N N 4.936  -6.984  -11.440 1.059  -2.783 0.752  C02  USR 2  
USR C03  C3  C 0 1 N N N N N N 3.661  -7.749  -11.848 1.842  -4.050 1.102  C03  USR 3  
USR C07  C4  C 0 1 N N R N N N 7.312  -7.703  -10.268 1.234  -0.496 -0.236 C07  USR 4  
USR C08  C5  C 0 1 N N S N N N 7.583  -7.008  -8.906  2.115  0.444  -1.063 C08  USR 5  
USR C09  C6  C 0 1 N N S N N N 8.757  -6.082  -8.951  1.405  1.793  -1.217 C09  USR 6  
USR C10  C7  C 0 1 N N N N N N 9.720  -6.426  -10.023 1.097  2.358  0.173  C10  USR 7  
USR C11  C8  C 0 1 N N S N N N 9.155  -6.441  -11.424 0.255  1.344  0.952  C11  USR 8  
USR C13  C9  C 0 1 N N N N N N 8.821  -5.076  -11.944 -0.002 1.866  2.341  C13  USR 9  
USR C16  C10 C 0 1 N N S N N N 10.293 -6.148  -14.470 -1.942 -1.082 0.233  C16  USR 10 
USR C17  C11 C 0 1 N N S N N N 10.347 -7.374  -13.663 -1.884 0.263  0.965  C17  USR 11 
USR C18  C12 C 0 1 N N S N N N 10.045 -8.725  -14.278 -3.287 0.877  0.991  C18  USR 12 
USR C19  C13 C 0 1 N N R N N N 9.723  -8.713  -15.746 -3.801 1.018  -0.444 C19  USR 13 
USR C21  C14 C 0 1 N N R N N N 9.975  -6.351  -15.957 -2.507 -0.865 -1.173 C21  USR 14 
USR C25  C15 C 0 1 N N N N N N 10.631 -5.298  -16.817 -2.624 -2.212 -1.889 C25  USR 15 
USR C28  C16 C 0 1 N N N N N N 5.858  -6.944  -6.970  4.491  0.983  -1.087 C28  USR 16 
USR C29  C17 C 0 1 N N N N N N 4.753  -6.161  -6.240  5.809  1.185  -0.385 C29  USR 17 
USR C32  C18 C 0 1 N N N N N N 9.938  -10.171 -17.579 -5.666 1.816  -1.721 C32  USR 18 
USR N15  N1  N 0 1 N N N N N N 6.483  -6.306  -8.152  3.396  0.641  -0.380 N15  USR 19 
USR O04  O1  O 0 1 N N N N N N 3.408  -7.672  -13.224 1.038  -4.895 1.928  O04  USR 20 
USR O05  O2  O 0 1 N N N N N N 5.357  -6.238  -12.553 -0.073 -3.129 -0.049 O05  USR 21 
USR O06  O3  O 0 1 N N N N N N 5.438  -8.947  -9.955  3.164  -1.598 0.711  O06  USR 22 
USR O12  O4  O 0 1 N N N N N N 7.880  -7.166  -11.478 0.960  0.103  1.032  O12  USR 23 
USR O14  O5  O 0 1 N N N N N N 9.427  -6.207  -7.658  0.186  1.612  -1.941 O14  USR 24 
USR O20  O6  O 0 1 N N N N N N 10.498 -7.645  -16.382 -3.800 -0.263 -1.077 O20  USR 25 
USR O22  O7  O 0 1 N N N N N N 10.230 -9.893  -16.209 -5.131 1.539  -0.425 O22  USR 26 
USR O23  O8  O 0 1 N N N N N N 11.699 -5.996  -14.347 -2.785 -1.982 0.954  O23  USR 27 
USR O24  O9  O 0 1 N N N N N N 10.144 -7.226  -12.183 -0.990 1.142  0.280  O24  USR 28 
USR O26  O10 O 0 1 N N N N N N 10.343 -5.498  -18.173 -3.039 -1.999 -3.240 O26  USR 29 
USR O27  O11 O 0 1 N N N N N N 9.129  -9.598  -13.551 -3.233 2.166  1.607  O27  USR 30 
USR O30  O12 O 0 1 N N N N N N 6.204  -8.034  -6.640  4.416  1.128  -2.289 O30  USR 31 
USR O31  O13 O 0 1 N N N N N N 4.624  -6.667  -4.933  6.810  1.539  -1.342 O31  USR 32 
USR O33  O14 O 0 1 N N N N N N 9.639  -4.161  -11.742 -1.136 2.053  2.716  O33  USR 33 
USR O34  O15 O 0 1 N N N N N N 7.724  -4.844  -12.571 1.027  2.124  3.163  O34  USR 34 
USR H011 H1  H 0 0 N N N N N N 6.200  -8.662  -11.755 2.206  -2.262 -0.995 H011 USR 35 
USR H021 H2  H 0 0 N N N N N N 4.675  -6.306  -10.614 0.721  -2.300 1.669  H021 USR 36 
USR H031 H3  H 0 0 N N N N N N 3.779  -8.807  -11.569 2.103  -4.581 0.186  H031 USR 37 
USR H032 H4  H 0 0 N N N N N N 2.804  -7.321  -11.307 2.752  -3.779 1.637  H032 USR 38 
USR H071 H5  H 0 0 N N N N N N 7.800  -8.682  -10.151 0.297  -0.674 -0.765 H071 USR 39 
USR H081 H6  H 0 0 N N N N N N 7.897  -7.827  -8.242  2.289  0.009  -2.047 H081 USR 40 
USR H091 H7  H 0 0 N N N N N N 8.403  -5.050  -9.090  2.051  2.485  -1.758 H091 USR 41 
USR H102 H8  H 0 0 N N N N N N 10.536 -5.689  -9.995  2.030  2.542  0.706  H102 USR 42 
USR H101 H9  H 0 0 N N N N N N 10.122 -7.427  -9.809  0.543  3.291  0.072  H101 USR 43 
USR H161 H10 H 0 0 N N N N N N 9.701  -5.341  -14.014 -0.938 -1.501 0.162  H161 USR 44 
USR H171 H11 H 0 0 N N N N N N 11.442 -7.478  -13.641 -1.535 0.108  1.985  H171 USR 45 
USR H181 H12 H 0 0 N N N N N N 11.010 -9.251  -14.229 -3.958 0.231  1.557  H181 USR 46 
USR H191 H13 H 0 0 N N N N N N 8.643  -8.598  -15.919 -3.152 1.698  -0.998 H191 USR 47 
USR H211 H14 H 0 0 N N N N N N 8.885  -6.316  -16.101 -1.842 -0.211 -1.736 H211 USR 48 
USR H252 H15 H 0 0 N N N N N N 10.262 -4.307  -16.514 -1.656 -2.713 -1.881 H252 USR 49 
USR H251 H16 H 0 0 N N N N N N 11.720 -5.344  -16.671 -3.359 -2.833 -1.377 H251 USR 50 
USR H292 H17 H 0 0 N N N N N N 5.021  -5.095  -6.199  5.711  1.984  0.350  H292 USR 51 
USR H291 H18 H 0 0 N N N N N N 3.800  -6.279  -6.777  6.098  0.262  0.118  H291 USR 52 
USR H323 H19 H 0 0 N N N N N N 10.384 -11.136 -17.861 -5.688 0.899  -2.309 H323 USR 53 
USR H322 H20 H 0 0 N N N N N N 8.848  -10.216 -17.720 -6.678 2.208  -1.621 H322 USR 54 
USR H321 H21 H 0 0 N N N N N N 10.357 -9.375  -18.212 -5.039 2.554  -2.223 H321 USR 55 
USR H151 H22 H 0 0 N N N N N N 6.173  -5.404  -8.451  3.456  0.525  0.581  H151 USR 56 
USR H041 H23 H 0 0 N N N N N N 2.616  -8.156  -13.428 1.472  -5.719 2.189  H041 USR 57 
USR H051 H24 H 0 0 N N N N N N 4.672  -5.629  -12.804 0.146  -3.641 -0.839 H051 USR 58 
USR H061 H25 H 0 0 N N N N N N 6.123  -9.545  -9.679  3.023  -1.209 1.585  H061 USR 59 
USR H141 H26 H 0 0 N N N N N N 10.185 -5.634  -7.637  -0.316 2.427  -2.076 H141 USR 60 
USR H231 H27 H 0 0 N N N N N N 11.975 -5.215  -14.812 -2.868 -2.855 0.547  H231 USR 61 
USR H261 H28 H 0 0 N N N N N N 10.767 -4.823  -18.690 -3.134 -2.812 -3.755 H261 USR 62 
USR H271 H29 H 0 0 N N N N N N 9.018  -10.411 -14.030 -4.097 2.581  1.728  H271 USR 63 
USR H311 H30 H 0 0 N N N N N N 5.143  -7.458  -4.847  7.686  1.684  -0.959 H311 USR 64 
USR H1   H31 H 0 1 N N N N N N 7.686  -3.927  -12.815 0.812  2.457  4.045  H1   USR 65 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
USR C01 C02  SING N N 1  
USR C02 C03  SING N N 2  
USR C03 O04  SING N N 3  
USR C02 O05  SING N N 4  
USR C01 O06  SING N N 5  
USR C07 C08  SING N N 6  
USR C08 C09  SING N N 7  
USR C10 C09  SING N N 8  
USR C10 C11  SING N N 9  
USR C11 O12  SING N N 10 
USR O12 C07  SING N N 11 
USR C11 C13  SING N N 12 
USR C09 O14  SING N N 13 
USR C08 N15  SING N N 14 
USR C16 C17  SING N N 15 
USR C17 C18  SING N N 16 
USR C19 C18  SING N N 17 
USR C19 O20  SING N N 18 
USR O20 C21  SING N N 19 
USR C21 C16  SING N N 20 
USR C19 O22  SING N N 21 
USR C16 O23  SING N N 22 
USR C17 O24  SING N N 23 
USR C01 C07  SING N N 24 
USR O24 C11  SING N N 25 
USR C21 C25  SING N N 26 
USR C25 O26  SING N N 27 
USR C18 O27  SING N N 28 
USR N15 C28  SING N N 29 
USR C28 C29  SING N N 30 
USR C28 O30  DOUB N N 31 
USR C29 O31  SING N N 32 
USR O22 C32  SING N N 33 
USR C13 O33  DOUB N N 34 
USR C13 O34  SING N N 35 
USR C01 H011 SING N N 36 
USR C02 H021 SING N N 37 
USR C03 H031 SING N N 38 
USR C03 H032 SING N N 39 
USR C07 H071 SING N N 40 
USR C08 H081 SING N N 41 
USR C09 H091 SING N N 42 
USR C10 H102 SING N N 43 
USR C10 H101 SING N N 44 
USR C16 H161 SING N N 45 
USR C17 H171 SING N N 46 
USR C18 H181 SING N N 47 
USR C19 H191 SING N N 48 
USR C21 H211 SING N N 49 
USR C25 H252 SING N N 50 
USR C25 H251 SING N N 51 
USR C29 H292 SING N N 52 
USR C29 H291 SING N N 53 
USR C32 H323 SING N N 54 
USR C32 H322 SING N N 55 
USR C32 H321 SING N N 56 
USR N15 H151 SING N N 57 
USR O04 H041 SING N N 58 
USR O05 H051 SING N N 59 
USR O06 H061 SING N N 60 
USR O14 H141 SING N N 61 
USR O23 H231 SING N N 62 
USR O26 H261 SING N N 63 
USR O27 H271 SING N N 64 
USR O31 H311 SING N N 65 
USR O34 H1   SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
USR SMILES           ACDLabs              12.01 "OCC(O)C(O)C1OC(OC2C(O)C(OC)OC(CO)C2O)(CC(O)C1NC(=O)CO)C(=O)O"                                                                                                                                                                 
USR InChI            InChI                1.06  "InChI=1S/C18H31NO15/c1-31-16-13(28)15(12(27)8(4-21)32-16)34-18(17(29)30)2-6(23)10(19-9(25)5-22)14(33-18)11(26)7(24)3-20/h6-8,10-16,20-24,26-28H,2-5H2,1H3,(H,19,25)(H,29,30)/t6-,7-,8+,10+,11+,12-,13-,14+,15-,16+,18-/m0/s1" 
USR InChIKey         InChI                1.06  UWADXVSOESDFFH-VKYAEBFESA-N                                                                                                                                                                                                    
USR SMILES_CANONICAL CACTVS               3.385 "CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](O[C@@]2(C[C@H](O)[C@H](NC(=O)CO)[C@@H](O2)[C@H](O)[C@@H](O)CO)C(O)=O)[C@@H]1O"                                                                                                               
USR SMILES           CACTVS               3.385 "CO[CH]1O[CH](CO)[CH](O)[CH](O[C]2(C[CH](O)[CH](NC(=O)CO)[CH](O2)[CH](O)[CH](O)CO)C(O)=O)[CH]1O"                                                                                                                               
USR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CO[C@H]1[C@@H]([C@@H]([C@H]([C@H](O1)CO)O)O[C@@]2(C[C@@H]([C@H]([C@H](O2)[C@H]([C@H](CO)O)O)NC(=O)CO)O)C(=O)O)O"                                                                                                              
USR SMILES           "OpenEye OEToolkits" 2.0.7 "COC1C(C(C(C(O1)CO)O)OC2(CC(C(C(O2)C(C(CO)O)O)NC(=O)CO)O)C(=O)O)O"                                                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
USR "SYSTEMATIC NAME" ACDLabs              12.01 "methyl 3-O-[3,5-dideoxy-5-(2-hydroxyacetamido)-L-glycero-alpha-D-gulo-non-2-ulopyranonosyl]-beta-D-talopyranoside"                                                                                                                  
USR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S},4~{S},5~{R},6~{S})-2-[(2~{R},3~{S},4~{R},5~{R},6~{R})-2-(hydroxymethyl)-6-methoxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-4-oxidanyl-5-(2-oxidanylethanoylamino)-6-[(1~{S},2~{S})-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
USR "Create component" 2023-09-06 RCSB 
USR "Initial release"  2024-05-15 RCSB 
# 
