data_T7R
# 
_chem_comp.id                                    T7R 
_chem_comp.name                                  "tungsten cofactor" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H24 N10 O14 P2 S4 W" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "[(5~{a}~{R},8~{R},9~{a}~{R})-2-azanyl-4-oxidanylidene-8-(phosphonooxymethyl)-6-sulfanyl-3,4~{a},5,5~{a},8,9~{a}-hexahydropyrano[3,2-g]pteridin-7-yl]sulfanyl-[[(5~{a}~{R},8~{R},9~{a}~{R})-2-azanyl-4-oxidanylidene-8-(phosphonooxymethyl)-7-sulfanyl-3,5,5~{a},6,7,8,9~{a},10-octahydropyrano[3,2-g]pteridin-6-yl]sulfanyl]-bis($l^{1}-oxidanyl)tungsten" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-12-22 
_chem_comp.pdbx_modified_date                    2023-05-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        1002.511 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     T7R 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8C0Z 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
T7R C1  C1  C 0 1 N N N 143.977 109.873 93.965  -1.655 1.716  1.778  C1  T7R 1  
T7R C2  C2  C 0 1 N N R 140.405 114.298 91.498  4.693  -1.446 -0.607 C2  T7R 2  
T7R C3  C3  C 0 1 N N N 142.638 115.341 91.542  4.731  0.112  1.321  C3  T7R 3  
T7R C4  C4  C 0 1 N N R 143.157 108.595 94.131  -2.593 0.525  1.995  C4  T7R 4  
T7R C5  C5  C 0 1 N N N 144.036 115.340 91.266  4.795  0.350  2.696  C5  T7R 5  
T7R C6  C6  C 0 1 N N N 141.735 108.678 93.569  -2.010 -0.721 1.281  C6  T7R 6  
T7R O2  O1  O 0 1 N N N 139.231 109.181 90.064  -0.028 -3.939 1.676  O2  T7R 7  
T7R O3  O2  O 0 1 N N N 137.247 109.388 91.856  0.451  -4.421 -0.708 O3  T7R 8  
T7R O4  O3  O 0 1 N N N 140.366 114.886 93.818  4.421  -0.487 -2.760 O4  T7R 9  
T7R O5  O4  O 0 1 N N N 142.700 113.814 97.102  1.852  3.843  -3.684 O5  T7R 10 
T7R O6  O5  O 0 1 N N N 141.040 114.850 98.767  4.265  4.140  -4.363 O6  T7R 11 
T7R C10 C7  C 0 1 N N R 140.954 107.137 95.403  -4.271 -1.223 0.390  C10 T7R 12 
T7R C14 C8  C 0 1 N N N 140.506 107.015 97.760  -5.641 0.138  -1.158 C14 T7R 13 
T7R C15 C9  C 0 1 N N N 139.464 106.793 98.714  -6.007 0.502  -2.456 C15 T7R 14 
T7R C19 C10 C 0 1 N N N 141.179 105.733 100.082 -7.994 1.405  -1.584 C19 T7R 15 
T7R C24 C11 C 0 1 N N N 141.742 106.417 97.991  -6.491 0.451  -0.106 C24 T7R 16 
T7R C28 C12 C 0 1 N N R 142.457 106.990 95.702  -4.755 -0.284 1.488  C28 T7R 17 
T7R C8  C13 C 0 1 N N N 140.740 107.974 94.159  -2.757 -1.502 0.570  C8  T7R 18 
T7R N12 N1  N 0 1 N N N 140.287 107.726 96.573  -4.434 -0.552 -0.908 N12 T7R 19 
T7R N17 N2  N 0 1 N N N 139.927 106.263 99.927  -7.181 1.141  -2.645 N17 T7R 20 
T7R N20 N3  N 0 1 N N N 141.418 105.125 101.282 -9.191 2.046  -1.797 N20 T7R 21 
T7R N23 N4  N 0 1 N N N 142.076 105.736 99.116  -7.654 1.064  -0.358 N23 T7R 22 
T7R N25 N5  N 0 1 N N N 142.711 106.496 97.020  -6.121 0.158  1.196  N25 T7R 23 
T7R O16 O6  O 0 1 N N N 138.232 107.019 98.568  -5.279 0.247  -3.401 O16 T7R 24 
T7R O29 O7  O 0 1 N N N 143.146 108.241 95.513  -3.878 0.846  1.491  O29 T7R 25 
T7R O31 O8  O 0 1 N N N 145.608 111.089 96.365  0.033  4.080  2.933  O31 T7R 26 
T7R O32 O9  O 0 1 N N N 147.587 109.881 95.305  -2.109 5.244  3.586  O32 T7R 27 
T7R O33 O10 O 0 1 N N N 146.503 111.910 94.118  -1.446 4.911  1.064  O33 T7R 28 
T7R O34 O11 O 0 1 N N N 145.359 109.611 94.239  -2.126 2.837  2.530  O34 T7R 29 
T7R P30 P1  P 0 1 N N N 146.324 110.679 95.061  -1.381 4.264  2.537  P30 T7R 30 
T7R S7  S1  S 0 1 N N N 141.506 109.510 92.032  -0.289 -0.991 1.502  S7  T7R 31 
T7R S9  S2  S 0 1 N N N 139.028 108.097 93.689  -2.139 -2.931 -0.241 S9  T7R 32 
T7R C11 C14 C 0 1 N N N 140.276 113.140 95.424  2.571  1.032  -2.522 C11 T7R 33 
T7R C41 C15 C 0 1 N N R 139.556 113.786 94.250  3.006  -0.421 -2.736 C41 T7R 34 
T7R C61 C16 C 0 1 N N N 139.286 112.785 93.145  2.426  -1.301 -1.599 C61 T7R 35 
T7R C7  C17 C 0 1 N N N 143.988 117.752 91.702  4.048  2.542  2.295  C7  T7R 36 
T7R C9  C18 C 0 1 N N N 142.059 116.543 91.969  4.349  1.143  0.475  C9  T7R 37 
T7R C27 C19 C 0 1 N N R 140.015 115.366 92.531  4.997  -0.233 -1.473 C27 T7R 38 
T7R C81 C20 C 0 1 N N N 139.703 113.007 91.874  3.175  -1.756 -0.649 C81 T7R 39 
T7R N1  N6  N 0 1 N N N 141.878 114.163 91.427  5.037  -1.158 0.790  N1  T7R 40 
T7R W1  W1  W 0 1 N N N 138.935 109.782 91.682  0.210  -2.968 0.238  W1  T7R 41 
T7R N2  N7  N 0 1 N N N 144.659 116.604 91.388  4.460  1.572  3.160  N2  T7R 42 
T7R N3  N8  N 0 1 N N N 144.702 118.912 91.638  3.685  3.772  2.787  N3  T7R 43 
T7R N4  N9  N 0 1 N N N 142.714 117.745 92.024  3.996  2.325  0.997  N4  T7R 44 
T7R N5  N10 N 0 1 N N N 140.727 116.585 92.270  4.378  0.964  -0.897 N5  T7R 45 
T7R O1  O12 O 0 1 N N N 144.757 114.362 90.974  5.145  -0.531 3.463  O1  T7R 46 
T7R O7  O13 O 0 1 N N N 140.941 112.318 98.277  3.552  4.085  -1.833 O7  T7R 47 
T7R O8  O14 O 0 1 N N N 140.256 114.039 96.528  3.412  1.898  -3.286 O8  T7R 48 
T7R P1  P2  P 0 1 N N N 141.303 113.739 97.785  3.240  3.499  -3.300 P1  T7R 49 
T7R S71 S3  S 0 1 N N N 138.110 111.558 93.539  0.704  -1.632 -1.691 S71 T7R 50 
T7R S91 S4  S 0 1 N N N 139.496 111.792 90.601  2.558  -2.744 0.663  S91 T7R 51 
T7R H1  H1  H 0 1 N N N 143.874 110.240 92.933  -0.651 1.453  2.110  H1  T7R 52 
T7R H2  H2  H 0 1 N N N 143.606 110.637 94.664  -1.632 1.973  0.719  H2  T7R 53 
T7R H3  H3  H 0 1 N N N 140.031 114.621 90.515  5.255  -2.308 -0.958 H3  T7R 54 
T7R H4  H4  H 0 1 N N N 143.678 107.802 93.575  -2.670 0.322  3.066  H4  T7R 55 
T7R H7  H7  H 0 1 N N N 141.795 115.426 98.804  4.217  5.104  -4.425 H7  T7R 56 
T7R H8  H8  H 0 1 N N N 140.541 106.134 95.222  -4.831 -2.151 0.410  H8  T7R 57 
T7R H10 H10 H 0 1 N N N 142.858 106.265 94.979  -4.721 -0.786 2.451  H10 T7R 58 
T7R H11 H11 H 0 1 N N N 140.628 108.658 96.695  -3.735 -0.582 -1.574 H11 T7R 59 
T7R H13 H13 H 0 1 N N N 139.313 106.273 100.716 -7.448 1.413  -3.537 H13 T7R 60 
T7R H14 H14 H 0 1 N N N 142.292 104.667 101.445 -9.450 2.304  -2.695 H14 T7R 61 
T7R H15 H15 H 0 1 N N N 140.719 105.138 101.997 -9.778 2.239  -1.049 H15 T7R 62 
T7R H16 H16 H 0 1 N N N 147.718 109.772 96.240  -1.711 6.124  3.644  H16 T7R 63 
T7R H17 H17 H 0 1 N N N 146.134 112.682 94.531  -2.345 5.060  0.739  H17 T7R 64 
T7R H19 H19 H 0 1 N N N 139.767 112.205 95.700  1.536  1.153  -2.844 H19 T7R 65 
T7R H20 H20 H 0 1 N N N 141.317 112.922 95.144  2.654  1.284  -1.465 H20 T7R 66 
T7R H21 H21 H 0 1 N N N 138.589 114.167 94.611  2.615  -0.772 -3.694 H21 T7R 67 
T7R H23 H23 H 0 1 N N N 138.931 115.540 92.469  6.071  -0.095 -1.565 H23 T7R 68 
T7R H25 H25 H 0 1 N N N 142.160 113.550 92.165  5.467  -1.830 1.339  H25 T7R 69 
T7R H26 H26 H 0 1 N N N 145.646 116.661 91.236  4.510  1.763  4.110  H26 T7R 70 
T7R H27 H27 H 0 1 N N N 144.257 119.785 91.839  3.722  3.944  3.741  H27 T7R 71 
T7R H28 H28 H 0 1 N N N 145.671 118.890 91.390  3.390  4.470  2.181  H28 T7R 72 
T7R H29 H29 H 0 1 N N N 140.632 117.156 93.086  3.985  1.636  -1.479 H29 T7R 73 
T7R H30 H30 H 0 1 N N N 141.651 111.721 98.073  4.446  3.896  -1.517 H30 T7R 74 
T7R H5  H5  H 0 1 N N N 143.432 107.077 97.397  -6.768 0.245  1.915  H5  T7R 75 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
T7R C1  C4  SING N N 1  
T7R C1  O34 SING N N 2  
T7R C2  C27 SING N N 3  
T7R C2  C81 SING N N 4  
T7R C2  N1  SING N N 5  
T7R C3  C5  SING N N 6  
T7R C3  C9  DOUB N N 7  
T7R C3  N1  SING N N 8  
T7R C4  C6  SING N N 9  
T7R C4  O29 SING N N 10 
T7R C5  N2  SING N N 11 
T7R C5  O1  DOUB N N 12 
T7R C6  C8  DOUB N N 13 
T7R C6  S7  SING N N 14 
T7R O2  W1  DOUB N N 15 
T7R O3  W1  DOUB N N 16 
T7R O4  C41 SING N N 17 
T7R O4  C27 SING N N 18 
T7R O5  P1  DOUB N N 19 
T7R O6  P1  SING N N 20 
T7R C10 C28 SING N N 21 
T7R C10 C8  SING N N 22 
T7R C10 N12 SING N N 23 
T7R C14 C15 SING N N 24 
T7R C14 C24 DOUB N N 25 
T7R C14 N12 SING N N 26 
T7R C15 N17 SING N N 27 
T7R C15 O16 DOUB N N 28 
T7R C19 N17 SING N N 29 
T7R C19 N20 SING N N 30 
T7R C19 N23 DOUB N N 31 
T7R C24 N23 SING N N 32 
T7R C24 N25 SING N N 33 
T7R C28 N25 SING N N 34 
T7R C28 O29 SING N N 35 
T7R C8  S9  SING N N 36 
T7R O31 P30 DOUB N N 37 
T7R O32 P30 SING N N 38 
T7R O33 P30 SING N N 39 
T7R O34 P30 SING N N 40 
T7R C11 C41 SING N N 41 
T7R C11 O8  SING N N 42 
T7R C41 C61 SING N N 43 
T7R C61 C81 DOUB N N 44 
T7R C61 S71 SING N N 45 
T7R C7  N2  SING N N 46 
T7R C7  N3  SING N N 47 
T7R C7  N4  DOUB N N 48 
T7R C9  N4  SING N N 49 
T7R C9  N5  SING N N 50 
T7R C27 N5  SING N N 51 
T7R C81 S91 SING N N 52 
T7R W1  S91 SING N N 53 
T7R O7  P1  SING N N 54 
T7R O8  P1  SING N N 55 
T7R W1  S7  SING N N 56 
T7R C1  H1  SING N N 57 
T7R C1  H2  SING N N 58 
T7R C2  H3  SING N N 59 
T7R C4  H4  SING N N 60 
T7R O6  H7  SING N N 61 
T7R C10 H8  SING N N 62 
T7R C28 H10 SING N N 63 
T7R N12 H11 SING N N 64 
T7R N17 H13 SING N N 65 
T7R N20 H14 SING N N 66 
T7R N20 H15 SING N N 67 
T7R O32 H16 SING N N 68 
T7R O33 H17 SING N N 69 
T7R C11 H19 SING N N 70 
T7R C11 H20 SING N N 71 
T7R C41 H21 SING N N 72 
T7R C27 H23 SING N N 73 
T7R N1  H25 SING N N 74 
T7R N2  H26 SING N N 75 
T7R N3  H27 SING N N 76 
T7R N3  H28 SING N N 77 
T7R N5  H29 SING N N 78 
T7R O7  H30 SING N N 79 
T7R W1  S71 SING N N 80 
T7R W1  S9  SING N N 81 
T7R N25 H5  SING N N 82 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
T7R InChI            InChI                1.06  "InChI=1S/2C10H14N5O6PS2.2O.W/c2*11-10-14-7-4(8(16)15-10)12-3-6(24)5(23)2(21-9(3)13-7)1-20-22(17,18)19;;;/h2*2-3,9,12,23-24H,1H2,(H2,17,18,19)(H4,11,13,14,15,16);;;/q;;;;+4/p-4/t2*2-,3+,9-;;;/m11.../s1" 
T7R InChIKey         InChI                1.06  KOSOUPJZBKQLDF-RRYOYCSRSA-J                                                                                                                                                                                
T7R SMILES_CANONICAL CACTVS               3.385 "NC1=NC2=C(N[C@@H]3[C@H](N2)O[C@H](CO[P](O)(O)=O)C4=C3S[W]5(=O)(=O)(S4)SC6=C(S5)[C@@H]7NC8=C(N[C@@H]7O[C@@H]6CO[P](O)(O)=O)N=C(N)NC8=O)C(=O)N1"                                                            
T7R SMILES           CACTVS               3.385 "NC1=NC2=C(N[CH]3[CH](N2)O[CH](CO[P](O)(O)=O)C4=C3S[W]5(=O)(=O)(S4)SC6=C(S5)[CH]7NC8=C(N[CH]7O[CH]6CO[P](O)(O)=O)N=C(N)NC8=O)C(=O)N1"                                                                      
T7R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1C2=C([C@H]3[C@@H](O1)NC4=C(N3)C(=O)NC(=N4)N)S[W]5(=O)(=O)(S2)SC6=C(S5)[C@H]7[C@H](NC8=C(N7)C(=O)NC(=N8)N)O[C@@H]6COP(=O)(O)O)OP(=O)(O)O"                                                         
T7R SMILES           "OpenEye OEToolkits" 2.0.7 "C(C1C2=C(C3C(O1)NC4=C(N3)C(=O)NC(=N4)N)S[W]5(=O)(=O)(S2)SC6=C(S5)C7C(NC8=C(N7)C(=O)NC(=N8)N)OC6COP(=O)(O)O)OP(=O)(O)O"                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           T7R 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        
;[(1~{R},1'~{R},10~{R},10'~{R},16~{R},16'~{R})-5,5'-bis(azanyl)-7,7',13,13-tetrakis(oxidanylidene)-16'-(phosphonooxymethyl)-13,13'-spirobi[17-oxa-12,14-dithia-2,4,6,9-tetraza-13$l^{8}-tungstatetracyclo[8.7.0.0^{3,8}.0^{11,15}]heptadeca-3(8),4,11(15)-triene]-16-yl]methyl dihydrogen phosphate
;
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      T7R 
_pdbx_chem_comp_synonyms.name         "[(5~{a}~{R},8~{R},9~{a}~{R})-2-azanyl-4-oxidanylidene-8-(phosphonooxymethyl)-6-sulfanyl-3,4~{a},5,5~{a},8,9~{a}-hexahydropyrano[3,2-g]pteridin-7-yl]sulfanyl-[[(5~{a}~{R},8~{R},9~{a}~{R})-2-azanyl-4-oxidanylidene-8-(phosphonooxymethyl)-7-sulfanyl-3,5,5~{a},6,7,8,9~{a},10-octahydropyrano[3,2-g]pteridin-6-yl]sulfanyl]-bis($l^{1}-oxidanyl)tungsten" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
T7R "Create component"    2022-12-22 PDBE 
T7R "Modify linking type" 2023-01-18 PDBE 
T7R "Initial release"     2023-05-31 RCSB 
# 
