data_T3R
# 
_chem_comp.id                                    T3R 
_chem_comp.name                                  N,5-dimethyl-L-norleucine 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C8 H17 N O2" 
_chem_comp.mon_nstd_parent_comp_id               LEU 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-07-15 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        159.226 
_chem_comp.one_letter_code                       L 
_chem_comp.three_letter_code                     T3R 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8DNY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
T3R C52  C52  C 0 1 N N N N N N 122.299 123.400 112.397 -2.012 -2.322 0.581  C52  T3R 1  
T3R CA   C53  C 0 1 N N S Y N N 124.060 124.263 110.835 -0.941 -0.170 0.284  C53  T3R 2  
T3R C    C54  C 0 1 N N N Y N Y 124.740 122.860 111.003 -2.085 0.749  -0.060 C54  T3R 3  
T3R C70  C70  C 0 1 N N N N N N 124.670 125.328 111.770 0.362  0.407  -0.273 C70  T3R 4  
T3R C71  C71  C 0 1 N N N N N N 124.160 126.800 111.426 1.538  -0.459 0.182  C71  T3R 5  
T3R C72  C72  C 0 1 N N N N N N 123.662 127.614 112.662 2.842  0.117  -0.376 C72  T3R 6  
T3R C73  C73  C 0 1 N N N N N N 124.728 127.724 113.721 3.093  1.496  0.238  C73  T3R 7  
T3R C74  C74  C 0 1 N N N N N N 122.353 127.036 113.240 4.003  -0.816 -0.026 C74  T3R 8  
T3R N    N51  N 0 1 N N N Y Y N 122.665 124.055 111.155 -1.182 -1.494 -0.305 N51  T3R 9  
T3R O    O69  O 0 1 N N N Y N Y 125.379 122.621 111.982 -2.734 0.557  -1.061 O69  T3R 10 
T3R H521 H521 H 0 0 N N N N N N 121.203 123.331 112.467 -1.470 -2.519 1.505  H521 T3R 11 
T3R H522 H522 H 0 0 N N N N N N 122.732 122.389 112.420 -2.938 -1.794 0.808  H522 T3R 12 
T3R H523 H523 H 0 0 N N N N N N 122.684 123.983 113.246 -2.242 -3.265 0.086  H523 T3R 13 
T3R HA   H531 H 0 0 N N N Y N N 124.172 124.591 109.791 -0.863 -0.263 1.367  H531 T3R 14 
T3R H702 H702 H 0 0 N N N N N N 124.390 125.090 112.807 0.318  0.417  -1.362 H702 T3R 15 
T3R H701 H701 H 0 0 N N N N N N 125.765 125.301 111.670 0.496  1.424  0.095  H701 T3R 16 
T3R H711 H711 H 0 0 N N N N N N 124.990 127.352 110.962 1.582  -0.470 1.271  H711 T3R 17 
T3R H712 H712 H 0 0 N N N N N N 123.329 126.718 110.710 1.405  -1.477 -0.187 H712 T3R 18 
T3R H721 H721 H 0 0 N N N N N N 123.439 128.631 112.308 2.764  0.211  -1.459 H721 T3R 19 
T3R H733 H733 H 0 0 N N N N N N 124.341 128.302 114.573 3.171  1.403  1.321  H733 T3R 20 
T3R H731 H731 H 0 0 N N N N N N 125.013 126.717 114.061 4.021  1.907  -0.159 H731 T3R 21 
T3R H732 H732 H 0 0 N N N N N N 125.609 128.233 113.303 2.266  2.161  -0.011 H732 T3R 22 
T3R H743 H743 H 0 0 N N N N N N 122.038 127.636 114.106 3.824  -1.798 -0.464 H743 T3R 23 
T3R H741 H741 H 0 0 N N N N N N 121.568 127.064 112.469 4.931  -0.405 -0.423 H741 T3R 24 
T3R H742 H742 H 0 0 N N N N N N 122.520 125.996 113.556 4.081  -0.909 1.057  H742 T3R 25 
T3R H    H2   H 0 1 N Y N Y Y N 122.233 124.957 111.165 -1.601 -1.412 -1.220 H2   T3R 26 
T3R OXT  OXT  O 0 1 N Y N Y N Y 124.550 121.807 109.938 -2.383 1.780  0.746  OXT  T3R 27 
T3R HXT  HXT  H 0 1 N Y N Y N Y 125.000 121.011 110.195 -3.125 2.342  0.483  HXT  T3R 28 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
T3R CA  C    SING N N 1  
T3R CA  N    SING N N 2  
T3R CA  C70  SING N N 3  
T3R C   O    DOUB N N 4  
T3R N   C52  SING N N 5  
T3R C71 C70  SING N N 6  
T3R C71 C72  SING N N 7  
T3R C72 C74  SING N N 8  
T3R C72 C73  SING N N 9  
T3R C52 H521 SING N N 10 
T3R C52 H522 SING N N 11 
T3R C52 H523 SING N N 12 
T3R CA  HA   SING N N 13 
T3R C70 H702 SING N N 14 
T3R C70 H701 SING N N 15 
T3R C71 H711 SING N N 16 
T3R C71 H712 SING N N 17 
T3R C72 H721 SING N N 18 
T3R C73 H733 SING N N 19 
T3R C73 H731 SING N N 20 
T3R C73 H732 SING N N 21 
T3R C74 H743 SING N N 22 
T3R C74 H741 SING N N 23 
T3R C74 H742 SING N N 24 
T3R N   H    SING N N 25 
T3R C   OXT  SING N N 26 
T3R OXT HXT  SING N N 27 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
T3R SMILES           ACDLabs              12.01 "CNC(CCC(C)C)C(=O)O"                                                                 
T3R InChI            InChI                1.06  "InChI=1S/C8H17NO2/c1-6(2)4-5-7(9-3)8(10)11/h6-7,9H,4-5H2,1-3H3,(H,10,11)/t7-/m0/s1" 
T3R InChIKey         InChI                1.06  NEBSZBVQOBTMPC-ZETCQYMHSA-N                                                          
T3R SMILES_CANONICAL CACTVS               3.385 "CN[C@@H](CCC(C)C)C(O)=O"                                                            
T3R SMILES           CACTVS               3.385 "CN[CH](CCC(C)C)C(O)=O"                                                              
T3R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)CC[C@@H](C(=O)O)NC"                                                            
T3R SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CCC(C(=O)O)NC"                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
T3R "SYSTEMATIC NAME" ACDLabs              12.01 N,5-dimethyl-L-norleucine                       
T3R "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-5-methyl-2-(methylamino)hexanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
T3R "Create component" 2022-07-15 RCSB 
T3R "Initial release"  2023-05-24 RCSB 
T3R "Modify backbone"  2023-11-03 PDBE 
T3R "Modify PCM"       2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 T3R LEU Norleucine  "Named protein modification" "Amino-acid side chain"              "Any position" ? ? ? ? 
2 T3R LEU Methylation "Named protein modification" "Amino-acid side chain and backbone" "Any position" ? ? ? ? 
# 
