data_L3R
# 
_chem_comp.id                                    L3R 
_chem_comp.name                                  "(2~{S},3~{R},4~{R},5~{S},6~{R})-2-[3-[[5-(4-fluorophenyl)thiophen-2-yl]methyl]-4-methyl-phenyl]-6-(hydroxymethyl)oxane-3,4,5-triol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H25 F O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         Canagliflozin 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-11-09 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        444.516 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     L3R 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8HDH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
L3R C7  C1  C 0 1 Y N N N N N 62.770 59.309 69.527 -0.332 2.004  -0.526 C7  L3R 1  
L3R C8  C2  C 0 1 Y N N N N N 63.965 60.023 69.805 -0.273 2.546  0.744  C8  L3R 2  
L3R C9  C3  C 0 1 N N S N N N 61.589 61.081 66.354 -3.527 0.001  -0.345 C9  L3R 3  
L3R O1  O1  O 0 1 N N N N N N 60.816 62.200 66.834 -4.739 0.507  0.216  O1  L3R 4  
L3R C1  C4  C 0 1 Y N N N N N 61.989 58.628 71.777 1.903  1.364  -1.333 C1  L3R 5  
L3R O5  O2  O 0 1 N N N N N N 60.141 65.183 66.587 -7.354 1.666  -0.075 O5  L3R 6  
L3R C5  C5  C 0 1 Y N N N N N 62.409 60.693 67.555 -2.381 0.902  0.038  C5  L3R 7  
L3R C6  C6  C 0 1 Y N N N N N 62.015 59.674 68.416 -1.385 1.182  -0.879 C6  L3R 8  
L3R C4  C7  C 0 1 Y N N N N N 63.584 61.377 67.832 -2.316 1.434  1.312  C4  L3R 9  
L3R O4  O3  O 0 1 N N N N N N 61.392 58.822 65.201 -2.087 -1.941 -0.413 O4  L3R 10 
L3R C3  C8  C 0 1 Y N N N N N 64.353 61.046 68.943 -1.265 2.260  1.663  C3  L3R 11 
L3R O3  O4  O 0 1 N N N N N N 59.073 59.724 64.047 -4.263 -3.604 0.410  O3  L3R 12 
L3R C2  C9  C 0 1 Y N N N N N 62.528 58.238 72.947 2.039  0.184  -1.945 C2  L3R 13 
L3R S1  S1  S 0 1 Y N N N N N 60.805 59.853 71.946 3.277  1.645  -0.271 S1  L3R 14 
L3R C10 C10 C 0 1 N N N N N N 62.270 58.179 70.406 0.750  2.314  -1.528 C10 L3R 15 
L3R C11 C11 C 0 1 N N N N N N 64.850 59.701 70.981 0.872  3.447  1.127  C11 L3R 16 
L3R C12 C12 C 0 1 N N R N N N 59.935 60.681 64.615 -4.464 -2.305 -0.150 C12 L3R 17 
L3R C13 C13 C 0 1 N N R N N N 60.703 59.980 65.717 -3.268 -1.410 0.191  C13 L3R 18 
L3R C14 C14 C 0 1 N N S N N N 59.118 61.816 65.210 -5.735 -1.684 0.437  C14 L3R 19 
L3R C15 C15 C 0 1 N N R N N N 60.021 62.837 65.821 -5.899 -0.263 -0.109 C15 L3R 20 
L3R C16 C16 C 0 1 N N N N N N 59.271 63.992 66.461 -7.134 0.386  0.519  C16 L3R 21 
L3R O2  O5  O 0 1 N N N N N N 58.356 62.452 64.227 -6.867 -2.472 0.063  O2  L3R 22 
L3R C17 C17 C 0 1 Y N N N N N 60.813 59.663 73.653 3.985  0.101  -0.727 C17 L3R 23 
L3R C18 C18 C 0 1 Y N N N N N 61.750 58.713 74.031 3.182  -0.516 -1.616 C18 L3R 24 
L3R C19 C19 C 0 1 Y N N N N N 59.870 60.423 74.470 5.263  -0.437 -0.213 C19 L3R 25 
L3R C20 C20 C 0 1 Y N N N N N 58.725 61.004 73.904 5.728  -1.677 -0.654 C20 L3R 26 
L3R C21 C21 C 0 1 Y N N N N N 57.815 61.705 74.679 6.921  -2.174 -0.172 C21 L3R 27 
L3R C22 C22 C 0 1 Y N N N N N 58.047 61.818 76.016 7.657  -1.445 0.748  C22 L3R 28 
L3R C23 C23 C 0 1 Y N N N N N 59.140 61.255 76.621 7.199  -0.214 1.189  C23 L3R 29 
L3R C24 C24 C 0 1 Y N N N N N 60.055 60.561 75.840 6.011  0.296  0.709  C24 L3R 30 
L3R F1  F1  F 0 1 N N N N N N 57.134 62.510 76.751 8.824  -1.937 1.218  F1  L3R 31 
L3R H1  H1  H 0 1 N N N N N N 62.279 61.438 65.575 -3.615 -0.033 -1.431 H1  L3R 32 
L3R H3  H3  H 0 1 N N N N N N 59.652 65.892 66.989 -8.123 2.136  0.276  H3  L3R 33 
L3R H4  H4  H 0 1 N N N N N N 61.093 59.149 68.216 -1.431 0.759  -1.872 H4  L3R 34 
L3R H5  H5  H 0 1 N N N N N N 63.905 62.175 67.178 -3.087 1.204  2.033  H5  L3R 35 
L3R H6  H6  H 0 1 N N N N N N 61.867 58.396 65.905 -1.865 -2.836 -0.123 H6  L3R 36 
L3R H7  H7  H 0 1 N N N N N N 65.265 61.590 69.140 -1.215 2.676  2.659  H7  L3R 37 
L3R H8  H8  H 0 1 N N N N N N 59.586 59.016 63.676 -4.987 -4.222 0.238  H8  L3R 38 
L3R H9  H9  H 0 1 N N N N N N 63.426 57.647 73.045 1.309  -0.193 -2.645 H9  L3R 39 
L3R H11 H11 H 0 1 N N N N N N 61.346 57.772 69.969 0.354  2.202  -2.538 H11 L3R 40 
L3R H12 H12 H 0 1 N N N N N N 63.037 57.391 70.441 1.095  3.339  -1.385 H12 L3R 41 
L3R H13 H13 H 0 1 N N N N N N 64.539 60.300 71.850 0.615  4.480  0.896  H13 L3R 42 
L3R H14 H14 H 0 1 N N N N N N 64.763 58.631 71.223 1.068  3.351  2.195  H14 L3R 43 
L3R H15 H15 H 0 1 N N N N N N 65.895 59.936 70.729 1.763  3.160  0.567  H15 L3R 44 
L3R H16 H16 H 0 1 N N N N N N 60.637 61.081 63.868 -4.563 -2.385 -1.233 H16 L3R 45 
L3R H17 H17 H 0 1 N N N N N N 59.980 59.654 66.479 -3.138 -1.371 1.272  H17 L3R 46 
L3R H18 H18 H 0 1 N N N N N N 58.464 61.404 65.993 -5.656 -1.651 1.523  H18 L3R 47 
L3R H19 H19 H 0 1 N N N N N N 60.679 63.241 65.038 -6.018 -0.300 -1.191 H19 L3R 48 
L3R H20 H20 H 0 1 N N N N N N 58.401 64.246 65.837 -6.977 0.504  1.591  H20 L3R 49 
L3R H21 H21 H 0 1 N N N N N N 58.929 63.689 67.461 -8.004 -0.249 0.348  H21 L3R 50 
L3R H22 H22 H 0 1 N N N N N N 57.855 63.156 64.621 -6.828 -3.388 0.372  H22 L3R 51 
L3R H25 H25 H 0 1 N N N N N N 61.874 58.371 75.048 3.414  -1.483 -2.038 H25 L3R 52 
L3R H26 H26 H 0 1 N N N N N N 58.549 60.903 72.843 5.155  -2.246 -1.371 H26 L3R 53 
L3R H27 H27 H 0 1 N N N N N N 56.940 62.153 74.232 7.282  -3.133 -0.513 H27 L3R 54 
L3R H28 H28 H 0 1 N N N N N N 59.287 61.349 77.687 7.777  0.350  1.907  H28 L3R 55 
L3R H29 H29 H 0 1 N N N N N N 60.925 60.121 76.305 5.657  1.258  1.050  H29 L3R 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
L3R O3  C12 SING N N 1  
L3R O2  C14 SING N N 2  
L3R C12 C14 SING N N 3  
L3R C12 C13 SING N N 4  
L3R O4  C13 SING N N 5  
L3R C14 C15 SING N N 6  
L3R C13 C9  SING N N 7  
L3R C15 C16 SING N N 8  
L3R C15 O1  SING N N 9  
L3R C9  O1  SING N N 10 
L3R C9  C5  SING N N 11 
L3R C16 O5  SING N N 12 
L3R C5  C4  DOUB Y N 13 
L3R C5  C6  SING Y N 14 
L3R C4  C3  SING Y N 15 
L3R C6  C7  DOUB Y N 16 
L3R C3  C8  DOUB Y N 17 
L3R C7  C8  SING Y N 18 
L3R C7  C10 SING N N 19 
L3R C8  C11 SING N N 20 
L3R C10 C1  SING N N 21 
L3R C1  S1  SING Y N 22 
L3R C1  C2  DOUB Y N 23 
L3R S1  C17 SING Y N 24 
L3R C2  C18 SING Y N 25 
L3R C17 C18 DOUB Y N 26 
L3R C17 C19 SING N N 27 
L3R C20 C19 DOUB Y N 28 
L3R C20 C21 SING Y N 29 
L3R C19 C24 SING Y N 30 
L3R C21 C22 DOUB Y N 31 
L3R C24 C23 DOUB Y N 32 
L3R C22 C23 SING Y N 33 
L3R C22 F1  SING N N 34 
L3R C9  H1  SING N N 35 
L3R O5  H3  SING N N 36 
L3R C6  H4  SING N N 37 
L3R C4  H5  SING N N 38 
L3R O4  H6  SING N N 39 
L3R C3  H7  SING N N 40 
L3R O3  H8  SING N N 41 
L3R C2  H9  SING N N 42 
L3R C10 H11 SING N N 43 
L3R C10 H12 SING N N 44 
L3R C11 H13 SING N N 45 
L3R C11 H14 SING N N 46 
L3R C11 H15 SING N N 47 
L3R C12 H16 SING N N 48 
L3R C13 H17 SING N N 49 
L3R C14 H18 SING N N 50 
L3R C15 H19 SING N N 51 
L3R C16 H20 SING N N 52 
L3R C16 H21 SING N N 53 
L3R O2  H22 SING N N 54 
L3R C18 H25 SING N N 55 
L3R C20 H26 SING N N 56 
L3R C21 H27 SING N N 57 
L3R C23 H28 SING N N 58 
L3R C24 H29 SING N N 59 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
L3R InChI            InChI                1.06  "InChI=1S/C24H25FO5S/c1-13-2-3-15(24-23(29)22(28)21(27)19(12-26)30-24)10-16(13)11-18-8-9-20(31-18)14-4-6-17(25)7-5-14/h2-10,19,21-24,26-29H,11-12H2,1H3/t19-,21-,22+,23-,24+/m1/s1" 
L3R InChIKey         InChI                1.06  XTNGUQKDFGDXSJ-ZXGKGEBGSA-N                                                                                                                                                         
L3R SMILES_CANONICAL CACTVS               3.385 "Cc1ccc(cc1Cc2sc(cc2)c3ccc(F)cc3)[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4O"                                                                                                         
L3R SMILES           CACTVS               3.385 "Cc1ccc(cc1Cc2sc(cc2)c3ccc(F)cc3)[CH]4O[CH](CO)[CH](O)[CH](O)[CH]4O"                                                                                                                
L3R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1Cc2ccc(s2)c3ccc(cc3)F)[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O"                                                                                                       
L3R SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1Cc2ccc(s2)c3ccc(cc3)F)C4C(C(C(C(O4)CO)O)O)O"                                                                                                                             
# 
_pdbx_chem_comp_identifier.comp_id           L3R 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S},3~{R},4~{R},5~{S},6~{R})-2-[3-[[5-(4-fluorophenyl)thiophen-2-yl]methyl]-4-methyl-phenyl]-6-(hydroxymethyl)oxane-3,4,5-triol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
L3R "Create component" 2022-11-09 PDBJ 
L3R "Initial release"  2023-11-08 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      L3R 
_pdbx_chem_comp_synonyms.name         Canagliflozin 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
