data_K3R
# 
_chem_comp.id                                    K3R 
_chem_comp.name                                  "~{N}-[[4-(1-methylpyrazol-4-yl)phenyl]methyl]-6-[7-(3-pyrrolidin-1-ylpropoxy)imidazo[1,2-a]pyridin-3-yl]pyrimidin-4-amine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H32 N8 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "[4-(1-Methyl-1H-pyrazol-4-yl)-benzyl]-{6-[7-(3-pyrrolidin-1-yl-propoxy)-imidazo[1,2-a]pyridin-3-yl]-pyrimidin-4-yl}-amine" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-05-19 
_chem_comp.pdbx_modified_date                    2023-02-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        508.617 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     K3R 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ZW8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
K3R C1  C1  C 0 1 N N N 16.931 13.627 -20.652 10.392  -4.319 -1.279 C1  K3R 1  
K3R C3  C2  C 0 1 Y N N 15.615 12.517 -18.839 8.369   -2.891 -0.893 C3  K3R 2  
K3R C4  C3  C 0 1 Y N N 14.385 11.928 -18.690 7.708   -2.403 0.196  C4  K3R 3  
K3R C5  C4  C 0 1 Y N N 13.774 11.987 -19.969 8.392   -2.850 1.343  C5  K3R 4  
K3R C7  C5  C 0 1 Y N N 13.814 11.400 -17.403 6.490   -1.554 0.176  C7  K3R 5  
K3R C8  C6  C 0 1 Y N N 14.675 11.026 -16.361 5.912   -1.190 -1.039 C8  K3R 6  
K3R C11 C7  C 0 1 N N N 12.257 10.004 -13.641 2.981   0.887  0.117  C11 K3R 7  
K3R C15 C8  C 0 1 Y N N 10.019 5.652  -14.174 0.104   3.978  0.042  C15 K3R 8  
K3R C17 C9  C 0 1 Y N N 12.334 5.816  -14.079 1.820   5.519  -0.008 C17 K3R 9  
K3R C19 C10 C 0 1 Y N N 8.812  4.817  -14.319 -1.338  3.677  0.049  C19 K3R 10 
K3R C23 C11 C 0 1 Y N N 6.997  1.785  -14.368 -4.135  1.509  -0.108 C23 K3R 11 
K3R C24 C12 C 0 1 Y N N 7.936  0.766  -14.249 -3.595  0.250  -0.251 C24 K3R 12 
K3R O25 O1  O 0 1 N N N 7.563  -0.554 -14.206 -4.404  -0.836 -0.344 O25 K3R 13 
K3R C27 C13 C 0 1 N N N 6.035  -2.343 -14.861 -6.556  -1.933 -0.408 C27 K3R 14 
K3R C30 C14 C 0 1 N N N 5.241  -5.291 -14.827 -10.225 -2.744 -0.648 C30 K3R 15 
K3R C31 C15 C 0 1 N N N 5.475  -6.828 -14.907 -10.949 -3.497 0.487  C31 K3R 16 
K3R C32 C16 C 0 1 N N N 6.713  -7.015 -13.979 -9.908  -4.564 0.918  C32 K3R 17 
K3R C33 C17 C 0 1 N N N 7.531  -5.716 -14.200 -8.578  -3.791 0.743  C33 K3R 18 
K3R C34 C18 C 0 1 Y N N 9.302  1.111  -14.148 -2.195  0.099  -0.299 C34 K3R 19 
K3R C35 C19 C 0 1 Y N N 9.668  2.420  -14.156 -1.395  1.181  -0.210 C35 K3R 20 
K3R C37 C20 C 0 1 Y N N 11.897 10.820 -16.021 4.785   -0.336 1.346  C37 K3R 21 
K3R C38 C21 C 0 1 Y N N 12.414 11.317 -17.218 5.917   -1.125 1.370  C38 K3R 22 
K3R N2  N1  N 0 1 Y N N 15.761 12.939 -20.118 9.415   -3.615 -0.445 N2  K3R 23 
K3R N6  N2  N 0 1 Y N N 14.598 12.587 -20.818 9.411   -3.570 0.954  N6  K3R 24 
K3R C9  C22 C 0 1 Y N N 14.152 10.560 -15.170 4.780   -0.401 -1.052 C9  K3R 25 
K3R C10 C23 C 0 1 Y N N 12.773 10.454 -14.995 4.218   0.027  0.137  C10 K3R 26 
K3R N12 N3  N 0 1 N N N 11.037 9.172  -13.694 3.369   2.300  0.081  N12 K3R 27 
K3R C13 C24 C 0 1 Y N N 11.088 7.780  -13.844 2.395   3.286  0.057  C13 K3R 28 
K3R C14 C25 C 0 1 Y N N 9.905  7.049  -13.979 1.046   2.945  0.066  C14 K3R 29 
K3R N16 N4  N 0 1 Y N N 11.242 5.071  -14.183 0.533   5.245  0.005  N16 K3R 30 
K3R N18 N5  N 0 1 Y N N 12.266 7.140  -13.905 2.737   4.573  0.015  N18 K3R 31 
K3R C20 C26 C 0 1 Y N N 7.520  5.299  -14.453 -2.368  4.584  0.167  C20 K3R 32 
K3R N21 N6  N 0 1 Y N N 6.693  4.257  -14.483 -3.517  3.918  0.125  N21 K3R 33 
K3R C22 C27 C 0 1 Y N N 7.396  3.126  -14.374 -3.276  2.617  -0.014 C22 K3R 34 
K3R C26 C28 C 0 1 N N N 6.183  -0.951 -14.251 -5.813  -0.601 -0.288 C26 K3R 35 
K3R C28 C29 C 0 1 N N N 6.654  -3.434 -13.991 -8.064  -1.683 -0.348 C28 K3R 36 
K3R N29 N7  N 0 1 N N N 6.607  -4.702 -14.759 -8.778  -2.961 -0.463 N29 K3R 37 
K3R N36 N8  N 0 1 Y N N 8.734  3.424  -14.264 -1.921  2.430  -0.065 N36 K3R 38 
K3R H1  H1  H 0 1 N N N 16.775 13.842 -21.719 11.224  -3.652 -1.505 H1  K3R 39 
K3R H2  H2  H 0 1 N N N 17.083 14.570 -20.106 10.762  -5.194 -0.745 H2  K3R 40 
K3R H3  H3  H 0 1 N N N 17.818 12.988 -20.533 9.917   -4.635 -2.208 H3  K3R 41 
K3R H4  H4  H 0 1 N N N 16.353 12.627 -18.058 8.100   -2.731 -1.927 H4  K3R 42 
K3R H5  H5  H 0 1 N N N 12.794 11.604 -20.213 8.122   -2.635 2.366  H5  K3R 43 
K3R H6  H6  H 0 1 N N N 15.745 11.102 -16.489 6.350   -1.523 -1.968 H6  K3R 44 
K3R H7  H7  H 0 1 N N N 13.049 9.421  -13.148 2.389   0.651  -0.767 H7  K3R 45 
K3R H8  H8  H 0 1 N N N 12.036 10.900 -13.043 2.390   0.696  1.012  H8  K3R 46 
K3R H9  H9  H 0 1 N N N 13.303 5.342  -14.136 2.135   6.552  -0.042 H9  K3R 47 
K3R H10 H10 H 0 1 N N N 5.949  1.539  -14.457 -5.206  1.643  -0.070 H10 K3R 48 
K3R H11 H11 H 0 1 N N N 4.964  -2.560 -14.989 -6.304  -2.406 -1.358 H11 K3R 49 
K3R H12 H12 H 0 1 N N N 6.531  -2.352 -15.843 -6.264  -2.588 0.412  H12 K3R 50 
K3R H13 H13 H 0 1 N N N 4.709  -4.933 -15.720 -10.539 -3.139 -1.615 H13 K3R 51 
K3R H14 H14 H 0 1 N N N 4.663  -5.033 -13.928 -10.450 -1.679 -0.592 H14 K3R 52 
K3R H15 H15 H 0 1 N N N 4.605  -7.385 -14.530 -11.175 -2.824 1.314  H15 K3R 53 
K3R H16 H16 H 0 1 N N N 5.696  -7.146 -15.937 -11.857 -3.973 0.116  H16 K3R 54 
K3R H17 H17 H 0 1 N N N 6.405  -7.112 -12.927 -10.057 -4.857 1.957  H17 K3R 55 
K3R H18 H18 H 0 1 N N N 7.295  -7.901 -14.273 -9.945  -5.433 0.261  H18 K3R 56 
K3R H19 H19 H 0 1 N N N 8.354  -5.905 -14.905 -8.389  -3.159 1.611  H19 K3R 57 
K3R H20 H20 H 0 1 N N N 7.942  -5.363 -13.243 -7.752  -4.487 0.595  H20 K3R 58 
K3R H21 H21 H 0 1 N N N 10.052 0.338  -14.065 -1.763  -0.884 -0.410 H21 K3R 59 
K3R H22 H22 H 0 1 N N N 10.714 2.677  -14.076 -0.323  1.055  -0.248 H22 K3R 60 
K3R H23 H23 H 0 1 N N N 10.830 10.719 -15.888 4.342   0.001  2.272  H23 K3R 61 
K3R H24 H24 H 0 1 N N N 11.745 11.638 -18.003 6.359   -1.408 2.315  H24 K3R 62 
K3R H25 H25 H 0 1 N N N 14.817 10.276 -14.368 4.331   -0.118 -1.993 H25 K3R 63 
K3R H26 H26 H 0 1 N N N 10.498 9.516  -14.463 4.307   2.545  0.074  H26 K3R 64 
K3R H27 H27 H 0 1 N N N 8.940  7.532  -13.936 0.736   1.911  0.092  H27 K3R 65 
K3R H28 H28 H 0 1 N N N 7.234  6.338  -14.521 -2.260  5.653  0.274  H28 K3R 66 
K3R H29 H29 H 0 1 N N N 5.620  -0.229 -14.861 -6.065  -0.129 0.662  H29 K3R 67 
K3R H30 H30 H 0 1 N N N 5.778  -0.961 -13.228 -6.106  0.054  -1.109 H30 K3R 68 
K3R H31 H31 H 0 1 N N N 7.697  -3.178 -13.754 -8.317  -1.210 0.601  H31 K3R 69 
K3R H32 H32 H 0 1 N N N 6.081  -3.539 -13.058 -8.357  -1.028 -1.169 H32 K3R 70 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
K3R N6  N2  SING Y N 1  
K3R N6  C5  DOUB Y N 2  
K3R C1  N2  SING N N 3  
K3R N2  C3  SING Y N 4  
K3R C5  C4  SING Y N 5  
K3R C3  C4  DOUB Y N 6  
K3R C4  C7  SING N N 7  
K3R C7  C38 DOUB Y N 8  
K3R C7  C8  SING Y N 9  
K3R C38 C37 SING Y N 10 
K3R C8  C9  DOUB Y N 11 
K3R C37 C10 DOUB Y N 12 
K3R C9  C10 SING Y N 13 
K3R C10 C11 SING N N 14 
K3R C31 C30 SING N N 15 
K3R C31 C32 SING N N 16 
K3R C27 C26 SING N N 17 
K3R C27 C28 SING N N 18 
K3R C30 N29 SING N N 19 
K3R N29 C33 SING N N 20 
K3R N29 C28 SING N N 21 
K3R N21 C20 SING Y N 22 
K3R N21 C22 DOUB Y N 23 
K3R C20 C19 DOUB Y N 24 
K3R C22 C23 SING Y N 25 
K3R C22 N36 SING Y N 26 
K3R C23 C24 DOUB Y N 27 
K3R C19 N36 SING Y N 28 
K3R C19 C15 SING N N 29 
K3R N36 C35 SING Y N 30 
K3R C26 O25 SING N N 31 
K3R C24 O25 SING N N 32 
K3R C24 C34 SING Y N 33 
K3R C33 C32 SING N N 34 
K3R N16 C15 DOUB Y N 35 
K3R N16 C17 SING Y N 36 
K3R C15 C14 SING Y N 37 
K3R C35 C34 DOUB Y N 38 
K3R C17 N18 DOUB Y N 39 
K3R C14 C13 DOUB Y N 40 
K3R N18 C13 SING Y N 41 
K3R C13 N12 SING N N 42 
K3R N12 C11 SING N N 43 
K3R C1  H1  SING N N 44 
K3R C1  H2  SING N N 45 
K3R C1  H3  SING N N 46 
K3R C3  H4  SING N N 47 
K3R C5  H5  SING N N 48 
K3R C8  H6  SING N N 49 
K3R C11 H7  SING N N 50 
K3R C11 H8  SING N N 51 
K3R C17 H9  SING N N 52 
K3R C23 H10 SING N N 53 
K3R C27 H11 SING N N 54 
K3R C27 H12 SING N N 55 
K3R C30 H13 SING N N 56 
K3R C30 H14 SING N N 57 
K3R C31 H15 SING N N 58 
K3R C31 H16 SING N N 59 
K3R C32 H17 SING N N 60 
K3R C32 H18 SING N N 61 
K3R C33 H19 SING N N 62 
K3R C33 H20 SING N N 63 
K3R C34 H21 SING N N 64 
K3R C35 H22 SING N N 65 
K3R C37 H23 SING N N 66 
K3R C38 H24 SING N N 67 
K3R C9  H25 SING N N 68 
K3R N12 H26 SING N N 69 
K3R C14 H27 SING N N 70 
K3R C20 H28 SING N N 71 
K3R C26 H29 SING N N 72 
K3R C26 H30 SING N N 73 
K3R C28 H31 SING N N 74 
K3R C28 H32 SING N N 75 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
K3R InChI            InChI                1.06  "InChI=1S/C29H32N8O/c1-35-20-24(18-34-35)23-7-5-22(6-8-23)17-30-28-16-26(32-21-33-28)27-19-31-29-15-25(9-13-37(27)29)38-14-4-12-36-10-2-3-11-36/h5-9,13,15-16,18-21H,2-4,10-12,14,17H2,1H3,(H,30,32,33)" 
K3R InChIKey         InChI                1.06  LVMAULGVWBINFP-UHFFFAOYSA-N                                                                                                                                                                              
K3R SMILES_CANONICAL CACTVS               3.385 "Cn1cc(cn1)c2ccc(CNc3cc(ncn3)c4cnc5cc(OCCCN6CCCC6)ccn45)cc2"                                                                                                                                             
K3R SMILES           CACTVS               3.385 "Cn1cc(cn1)c2ccc(CNc3cc(ncn3)c4cnc5cc(OCCCN6CCCC6)ccn45)cc2"                                                                                                                                             
K3R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1cc(cn1)c2ccc(cc2)CNc3cc(ncn3)c4cnc5n4ccc(c5)OCCCN6CCCC6"                                                                                                                                             
K3R SMILES           "OpenEye OEToolkits" 2.0.7 "Cn1cc(cn1)c2ccc(cc2)CNc3cc(ncn3)c4cnc5n4ccc(c5)OCCCN6CCCC6"                                                                                                                                             
# 
_pdbx_chem_comp_identifier.comp_id           K3R 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[[4-(1-methylpyrazol-4-yl)phenyl]methyl]-6-[7-(3-pyrrolidin-1-ylpropoxy)imidazo[1,2-a]pyridin-3-yl]pyrimidin-4-amine" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      K3R 
_pdbx_chem_comp_synonyms.name         "[4-(1-Methyl-1H-pyrazol-4-yl)-benzyl]-{6-[7-(3-pyrrolidin-1-yl-propoxy)-imidazo[1,2-a]pyridin-3-yl]-pyrimidin-4-yl}-amine" 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
K3R "Create component"  2022-05-19 PDBE 
K3R "Modify descriptor" 2022-08-22 RCSB 
K3R "Initial release"   2023-02-22 RCSB 
# 
