data_GER
# 
_chem_comp.id                                    GER 
_chem_comp.name                                  "GERAN-8-YL GERAN" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H34" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2000-01-19 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        274.484 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     GER 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1DOA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
GER C1   C1   C 0 1 N N N N N N 61.911 15.896 40.363 8.160  -0.190 0.569  C1   GER 1  
GER C2   C2   C 0 1 N N N N N N 61.687 14.397 40.304 6.659  -0.313 0.635  C2   GER 2  
GER C3   C3   C 0 1 N N N N N N 61.790 13.612 41.395 5.978  -0.612 -0.444 C3   GER 3  
GER C4   C4   C 0 1 N N N N N N 62.145 14.309 42.700 6.695  -0.831 -1.751 C4   GER 4  
GER C5   C5   C 0 1 N N N N N N 61.555 12.091 41.286 4.478  -0.735 -0.377 C5   GER 5  
GER C6   C6   C 0 1 N N N N N N 60.997 11.394 40.050 3.838  0.594  -0.783 C6   GER 6  
GER C7   C7   C 0 1 N N N N N N 61.507 9.970  39.929 2.338  0.470  -0.717 C7   GER 7  
GER C8   C8   C 0 1 N N N N N N 61.819 9.500  38.703 1.649  1.261  0.069  C8   GER 8  
GER C9   C9   C 0 1 N N N N N N 61.616 10.491 37.555 2.364  2.203  1.004  C9   GER 9  
GER C10  C10  C 0 1 N N N N N N 62.329 8.028  38.636 0.143  1.228  0.038  C10  GER 10 
GER C11  C11  C 0 1 N N N N N N 62.504 7.258  37.322 -0.370 0.294  1.136  C11  GER 11 
GER C12  C12  C 0 1 N N N N N N 62.675 5.767  37.537 -1.876 0.262  1.105  C12  GER 12 
GER C13  C13  C 0 1 N N N N N N 62.851 4.910  36.502 -2.503 -0.873 0.915  C13  GER 13 
GER C14  C14  C 0 1 N N N N N N 62.874 5.508  35.096 -1.722 -2.121 0.596  C14  GER 14 
GER C15  C15  C 0 1 N N N N N N 63.029 3.409  36.754 -4.006 -0.929 1.015  C15  GER 15 
GER C16  C16  C 0 1 N N N N N N 64.026 2.539  35.992 -4.616 -0.778 -0.379 C16  GER 16 
GER C17  C17  C 0 1 N N N N N N 64.267 1.224  36.703 -6.119 -0.835 -0.279 C17  GER 17 
GER C18  C18  C 0 1 N N N N N N 64.144 0.070  36.016 -6.837 0.209  -0.613 C18  GER 18 
GER C19  C19  C 0 1 N N N N N N 63.758 0.207  34.539 -6.160 1.505  -0.975 C19  GER 19 
GER C20  C20  C 0 1 N N N N N N 64.412 -1.213 36.841 -8.341 0.112  -0.636 C20  GER 20 
GER H11  H11  H 0 1 N N N N N N 61.965 16.218 41.413 8.547  0.062  1.556  H11  GER 21 
GER H12  H12  H 0 1 N N N N N N 62.853 16.146 39.854 8.588  -1.137 0.240  H12  GER 22 
GER H13  H13  H 0 1 N N N N N N 61.077 16.411 39.864 8.429  0.595  -0.138 H13  GER 23 
GER H21  H21  H 0 1 N N N N N N 61.437 13.943 39.356 6.145  -0.156 1.572  H21  GER 24 
GER H41  H41  H 0 1 N N N N N N 62.231 13.563 43.503 6.960  -1.884 -1.847 H41  GER 25 
GER H42  H42  H 0 1 N N N N N N 63.104 14.836 42.585 6.043  -0.543 -2.576 H42  GER 26 
GER H43  H43  H 0 1 N N N N N N 61.357 15.033 42.955 7.601  -0.225 -1.775 H43  GER 27 
GER H51  H51  H 0 1 N N N N N N 62.548 11.642 41.438 4.148  -1.520 -1.058 H51  GER 28 
GER H52  H52  H 0 1 N N N N N N 60.734 11.948 42.004 4.179  -0.987 0.640  H52  GER 29 
GER H61  H61  H 0 1 N N N N N N 59.900 11.371 40.123 4.168  1.379  -0.102 H61  GER 30 
GER H62  H62  H 0 1 N N N N N N 61.326 11.954 39.162 4.137  0.845  -1.801 H62  GER 31 
GER H71  H71  H 0 1 N N N N N N 61.618 9.347  40.804 1.830  -0.270 -1.317 H71  GER 32 
GER H91  H91  H 0 1 N N N N N N 61.567 11.514 37.957 2.616  3.120  0.472  H91  GER 33 
GER H92  H92  H 0 1 N N N N N N 62.458 10.414 36.851 1.715  2.438  1.847  H92  GER 34 
GER H93  H93  H 0 1 N N N N N N 60.677 10.258 37.032 3.276  1.730  1.367  H93  GER 35 
GER H101 H101 H 0 0 N N N N N N 63.330 8.050  39.091 -0.246 2.233  0.205  H101 GER 36 
GER H102 H102 H 0 0 N N N N N N 61.502 7.480  39.111 -0.193 0.866  -0.933 H102 GER 37 
GER H111 H111 H 0 0 N N N N N N 61.609 7.420  36.703 0.019  -0.711 0.969  H111 GER 38 
GER H112 H112 H 0 0 N N N N N N 63.416 7.632  36.834 -0.034 0.656  2.108  H112 GER 39 
GER H121 H121 H 0 0 N N N N N N 62.656 5.377  38.544 -2.439 1.174  1.240  H121 GER 40 
GER H141 H141 H 0 0 N N N N N N 62.880 6.606  35.164 -1.380 -2.583 1.522  H141 GER 41 
GER H142 H142 H 0 0 N N N N N N 63.778 5.169  34.568 -2.359 -2.820 0.055  H142 GER 42 
GER H143 H143 H 0 0 N N N N N N 61.981 5.180  34.544 -0.860 -1.863 -0.020 H143 GER 43 
GER H151 H151 H 0 0 N N N N N N 63.330 3.330  37.809 -4.306 -1.887 1.442  H151 GER 44 
GER H152 H152 H 0 0 N N N N N N 62.067 3.007  36.403 -4.358 -0.120 1.656  H152 GER 45 
GER H161 H161 H 0 0 N N N N N N 63.623 2.332  34.989 -4.316 0.179  -0.805 H161 GER 46 
GER H162 H162 H 0 0 N N N N N N 64.982 3.080  35.928 -4.264 -1.587 -1.020 H162 GER 47 
GER H171 H171 H 0 0 N N N N N N 64.535 1.210  37.749 -6.603 -1.735 0.068  H171 GER 48 
GER H191 H191 H 0 0 N N N N N N 62.662 0.240  34.447 -5.879 1.487  -2.027 H191 GER 49 
GER H192 H192 H 0 0 N N N N N N 64.188 1.134  34.132 -6.844 2.335  -0.795 H192 GER 50 
GER H193 H193 H 0 0 N N N N N N 64.147 -0.655 33.977 -5.267 1.632  -0.362 H193 GER 51 
GER H201 H201 H 0 0 N N N N N N 64.476 -2.078 36.164 -8.645 -0.894 -0.348 H201 GER 52 
GER H202 H202 H 0 0 N N N N N N 65.360 -1.105 37.388 -8.762 0.833  0.065  H202 GER 53 
GER H203 H203 H 0 0 N N N N N N 63.591 -1.367 37.556 -8.703 0.327  -1.641 H203 GER 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
GER C1  C2   SING N N 1  
GER C1  H11  SING N N 2  
GER C1  H12  SING N N 3  
GER C1  H13  SING N N 4  
GER C2  C3   DOUB N E 5  
GER C2  H21  SING N N 6  
GER C3  C4   SING N N 7  
GER C3  C5   SING N N 8  
GER C4  H41  SING N N 9  
GER C4  H42  SING N N 10 
GER C4  H43  SING N N 11 
GER C5  C6   SING N N 12 
GER C5  H51  SING N N 13 
GER C5  H52  SING N N 14 
GER C6  C7   SING N N 15 
GER C6  H61  SING N N 16 
GER C6  H62  SING N N 17 
GER C7  C8   DOUB N E 18 
GER C7  H71  SING N N 19 
GER C8  C9   SING N N 20 
GER C8  C10  SING N N 21 
GER C9  H91  SING N N 22 
GER C9  H92  SING N N 23 
GER C9  H93  SING N N 24 
GER C10 C11  SING N N 25 
GER C10 H101 SING N N 26 
GER C10 H102 SING N N 27 
GER C11 C12  SING N N 28 
GER C11 H111 SING N N 29 
GER C11 H112 SING N N 30 
GER C12 C13  DOUB N E 31 
GER C12 H121 SING N N 32 
GER C13 C14  SING N N 33 
GER C13 C15  SING N N 34 
GER C14 H141 SING N N 35 
GER C14 H142 SING N N 36 
GER C14 H143 SING N N 37 
GER C15 C16  SING N N 38 
GER C15 H151 SING N N 39 
GER C15 H152 SING N N 40 
GER C16 C17  SING N N 41 
GER C16 H161 SING N N 42 
GER C16 H162 SING N N 43 
GER C17 C18  DOUB N N 44 
GER C17 H171 SING N N 45 
GER C18 C19  SING N N 46 
GER C18 C20  SING N N 47 
GER C19 H191 SING N N 48 
GER C19 H192 SING N N 49 
GER C19 H193 SING N N 50 
GER C20 H201 SING N N 51 
GER C20 H202 SING N N 52 
GER C20 H203 SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
GER SMILES           ACDLabs              10.04 "C(=C/CCC(=C/C)/C)(\CC/C=C(/CC/C=C(\C)C)C)C"                                                                                  
GER SMILES_CANONICAL CACTVS               3.341 "C\C=C(/C)CC\C=C(/C)CC\C=C(/C)CCC=C(C)C"                                                                                      
GER SMILES           CACTVS               3.341 "CC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C"                                                                                            
GER SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C\C=C(/C)\CC\C=C(/C)\CC\C=C(/C)\CCC=C(C)C"                                                                                   
GER SMILES           "OpenEye OEToolkits" 1.5.0 "CC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C"                                                                                            
GER InChI            InChI                1.03  "InChI=1S/C20H34/c1-7-18(4)12-9-14-20(6)16-10-15-19(5)13-8-11-17(2)3/h7,11,14-15H,8-10,12-13,16H2,1-6H3/b18-7+,19-15+,20-14+" 
GER InChIKey         InChI                1.03  HSOYJGBJQAKCNA-CAIKYXSQSA-N                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
GER "SYSTEMATIC NAME" ACDLabs              10.04 "(6E,10E,14E)-2,6,10,14-tetramethylhexadeca-2,6,10,14-tetraene" 
GER "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(6E,10E,14E)-2,6,10,14-tetramethylhexadeca-2,6,10,14-tetraene" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
GER "Create component"  2000-01-19 RCSB 
GER "Modify descriptor" 2011-06-04 RCSB 
GER "Modify PCM"        2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 GER CYS Geranylgeranylation Lipid/lipid-like "Amino-acid side chain" "Any position" C1 SG PTM-0278 ? 
2 GER CMT Geranylgeranylation Lipid/lipid-like "Amino-acid side chain" "Any position" C1 SG ?        ? 
# 
