data_CER
# 
_chem_comp.id                                    CER 
_chem_comp.name                                  "(2S, 3R)-3-HYDROXY-4-OXO-7,10-TRANS,TRANS-DODECADIENAMIDE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H19 N O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         CERULENIN 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        225.284 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     CER 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1B3N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
CER C1   C1   C 0 1 N N N N N N 16.270 27.008 14.939 1.545  -0.081 -4.147 C1   CER 1  
CER N1   N1   N 0 1 N N N N N N 15.405 28.001 15.549 2.744  0.425  -4.496 N1   CER 2  
CER O1   O1   O 0 1 N N N N N N 16.728 30.271 11.664 -1.932 1.118  -1.563 O1   CER 3  
CER C2   C2   C 0 1 N N N N N N 16.925 27.331 13.561 0.850  0.415  -2.905 C2   CER 4  
CER O2   O2   O 0 1 N N N N N N 16.493 25.921 15.481 1.026  -0.936 -4.832 O2   CER 5  
CER C3   C3   C 0 1 N N S N N N 15.986 28.354 12.880 -0.482 -0.317 -2.739 C3   CER 6  
CER O3   O3   O 0 1 N N N N N N 14.813 27.662 12.446 -1.307 -0.068 -3.879 O3   CER 7  
CER C4   C4   C 0 1 N N N N N N 16.661 29.036 11.703 -1.177 0.178  -1.497 C4   CER 8  
CER C5   C5   C 0 1 N N N N N N 17.226 28.267 10.507 -0.928 -0.497 -0.174 C5   CER 9  
CER C6   C6   C 0 1 N N N N N N 17.265 29.232 9.297  -1.750 0.195  0.914  C6   CER 10 
CER C7   C7   C 0 1 N N N N N N 18.711 29.652 9.103  -1.502 -0.481 2.238  C7   CER 11 
CER C8   C8   C 0 1 N N N N N N 19.383 29.404 7.982  -1.002 0.201  3.238  C8   CER 12 
CER C9   C9   C 0 1 N N N N N N 20.833 29.912 7.969  -0.754 -0.475 4.562  C9   CER 13 
CER C10  C10  C 0 1 N N N N N N 20.766 31.443 7.867  0.710  -0.386 4.905  C10  CER 14 
CER C11  C11  C 0 1 N N N N N N 21.590 32.160 8.641  1.091  0.220  6.001  C11  CER 15 
CER C12  C12  C 0 1 N N N N N N 21.550 33.685 8.529  2.556  0.309  6.344  C12  CER 16 
CER HN11 1HN1 H 0 0 N N N N N N 15.220 28.898 15.101 3.191  0.106  -5.295 HN11 CER 17 
CER HN12 2HN1 H 0 0 N N N N N N 14.976 27.789 16.450 3.160  1.109  -3.948 HN12 CER 18 
CER H21  1H2  H 0 1 N N N N N N 17.981 27.677 13.639 0.668  1.486  -2.994 H21  CER 19 
CER H22  2H2  H 0 1 N N N N N N 17.126 26.427 12.939 1.480  0.225  -2.036 H22  CER 20 
CER H31  1H3  H 0 1 N N N N N N 15.721 29.152 13.611 -0.299 -1.388 -2.650 H31  CER 21 
CER HO3  HO3  H 0 1 N N N N N N 14.236 28.290 12.027 -1.444 0.887  -3.921 HO3  CER 22 
CER H51  1H5  H 0 1 N N N N N N 18.216 27.802 10.721 0.130  -0.433 0.073  H51  CER 23 
CER H52  2H5  H 0 1 N N N N N N 16.664 27.327 10.292 -1.223 -1.545 -0.240 H52  CER 24 
CER H61  1H6  H 0 1 N N N N N N 16.809 28.796 8.376  -2.809 0.131  0.666  H61  CER 25 
CER H62  2H6  H 0 1 N N N N N N 16.570 30.097 9.406  -1.455 1.242  0.980  H62  CER 26 
CER H71  1H7  H 0 1 N N N N N N 19.329 30.185 9.843  -1.736 -1.528 2.361  H71  CER 27 
CER H81  1H8  H 0 1 N N N N N N 18.829 28.866 7.193  -0.768 1.248  3.115  H81  CER 28 
CER H91  1H9  H 0 1 N N N N N N 21.431 29.555 8.839  -1.049 -1.522 4.496  H91  CER 29 
CER H92  2H9  H 0 1 N N N N N N 21.455 29.445 7.170  -1.339 0.018  5.338  H92  CER 30 
CER H101 1H10 H 0 0 N N N N N N 20.107 32.045 7.219  1.446  -0.824 4.246  H101 CER 31 
CER H111 1H11 H 0 0 N N N N N N 22.234 31.557 9.302  0.355  0.657  6.660  H111 CER 32 
CER H121 1H12 H 0 0 N N N N N N 22.236 34.282 9.173  2.677  0.845  7.285  H121 CER 33 
CER H122 2H12 H 0 0 N N N N N N 21.708 33.974 7.464  2.967  -0.695 6.443  H122 CER 34 
CER H123 3H12 H 0 0 N N N N N N 20.503 34.033 8.692  3.083  0.840  5.552  H123 CER 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CER C1  N1   SING N N 1  
CER C1  C2   SING N N 2  
CER C1  O2   DOUB N N 3  
CER N1  HN11 SING N N 4  
CER N1  HN12 SING N N 5  
CER O1  C4   DOUB N N 6  
CER C2  C3   SING N N 7  
CER C2  H21  SING N N 8  
CER C2  H22  SING N N 9  
CER C3  O3   SING N N 10 
CER C3  C4   SING N N 11 
CER C3  H31  SING N N 12 
CER O3  HO3  SING N N 13 
CER C4  C5   SING N N 14 
CER C5  C6   SING N N 15 
CER C5  H51  SING N N 16 
CER C5  H52  SING N N 17 
CER C6  C7   SING N N 18 
CER C6  H61  SING N N 19 
CER C6  H62  SING N N 20 
CER C7  C8   DOUB N E 21 
CER C7  H71  SING N N 22 
CER C8  C9   SING N N 23 
CER C8  H81  SING N N 24 
CER C9  C10  SING N N 25 
CER C9  H91  SING N N 26 
CER C9  H92  SING N N 27 
CER C10 C11  DOUB N E 28 
CER C10 H101 SING N N 29 
CER C11 C12  SING N N 30 
CER C11 H111 SING N N 31 
CER C12 H121 SING N N 32 
CER C12 H122 SING N N 33 
CER C12 H123 SING N N 34 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
CER SMILES           ACDLabs              10.04 "O=C(N)CC(O)C(=O)CC/C=C/C/C=C/C"                                                                                          
CER SMILES_CANONICAL CACTVS               3.341 "C/C=C/C/C=C/CCC(=O)[C@@H](O)CC(N)=O"                                                                                     
CER SMILES           CACTVS               3.341 "CC=CCC=CCCC(=O)[CH](O)CC(N)=O"                                                                                           
CER SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C\C=C\C\C=C\CCC(=O)[C@H](CC(=O)N)O"                                                                                      
CER SMILES           "OpenEye OEToolkits" 1.5.0 "CC=CCC=CCCC(=O)C(CC(=O)N)O"                                                                                              
CER InChI            InChI                1.03  "InChI=1S/C12H19NO3/c1-2-3-4-5-6-7-8-10(14)11(15)9-12(13)16/h2-3,5-6,11,15H,4,7-9H2,1H3,(H2,13,16)/b3-2+,6-5+/t11-/m0/s1" 
CER InChIKey         InChI                1.03  QEPYZBPOTYDXNA-FECJWDPASA-N                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
CER "SYSTEMATIC NAME" ACDLabs              10.04 "(3S,7E,10E)-3-hydroxy-4-oxododeca-7,10-dienamide"  
CER "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(3S,7E,10E)-3-hydroxy-4-oxo-dodeca-7,10-dienamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
CER "Create component"  1999-07-08 RCSB 
CER "Modify descriptor" 2011-06-04 RCSB 
CER "Modify synonyms"   2020-06-05 PDBE 
CER "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      CER 
_pdbx_chem_comp_synonyms.name         CERULENIN 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            CER 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C2 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
