data_C5R
#

_chem_comp.id                                   C5R
_chem_comp.name                                 "(2S)-2-[[(1R,4aS,10aR)-1,4a-dimethyl-7-propan-2-yl-2,3,4,9,10,10a-hexahydrophenanthren-1-yl]carbonylamino]-3-(1H-indol-3-yl)propanoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H38 N2 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        N-Dehydroabietoyl-L-Tryptophan
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-04-10
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       486.645
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    C5R
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6JS8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
C5R  N1   N1   N  0  1  N  N  N   1.310  -7.515  28.838   2.349   1.100  -0.460  N1   C5R   1  
C5R  C6   C1   C  0  1  Y  N  N   2.274  -4.036  25.316  -3.595  -0.484  -0.380  C6   C5R   2  
C5R  C7   C2   C  0  1  Y  N  N   2.417  -2.648  25.068  -4.746  -0.502  -1.149  C7   C5R   3  
C5R  C8   C3   C  0  1  Y  N  N   1.534  -1.938  24.263  -5.977  -0.259  -0.571  C8   C5R   4  
C5R  C9   C4   C  0  1  Y  N  N   0.481  -2.599  23.662  -6.055   0.001   0.785  C9   C5R   5  
C5R  C10  C5   C  0  1  N  N  N  -0.472  -1.855  22.774  -7.393   0.270   1.425  C10  C5R   6  
C5R  C11  C6   C  0  1  N  N  N   0.300  -1.042  21.724  -8.031   1.500   0.776  C11  C5R   7  
C5R  C12  C7   C  0  1  N  N  N  -1.429  -0.990  23.619  -8.306  -0.942   1.228  C12  C5R   8  
C5R  C13  C8   C  0  1  Y  N  N   0.348  -3.975  23.865  -4.909   0.014   1.549  C13  C5R   9  
C5R  N2   N2   N  0  1  Y  N  N   1.233  -6.574  33.186   5.441  -1.130   2.343  N2   C5R  10  
C5R  O3   O1   O  0  1  N  N  N  -2.104  -8.216  29.357   3.605   4.504   0.182  O3   C5R  11  
C5R  C22  C9   C  0  1  N  N  N  -1.045  -7.596  29.155   2.950   3.447  -0.323  C22  C5R  12  
C5R  O2   O2   O  0  1  N  N  N  -0.973  -6.365  28.882   2.181   3.595  -1.243  O2   C5R  13  
C5R  C21  C10  C  0  1  N  N  S   0.228  -8.391  29.230   3.173   2.075   0.258  C21  C5R  14  
C5R  C23  C11  C  0  1  N  N  N   0.380  -9.073  30.588   4.649   1.696   0.119  C23  C5R  15  
C5R  C24  C12  C  0  1  Y  N  N   0.448  -8.090  31.744   4.897   0.379   0.809  C24  C5R  16  
C5R  C27  C13  C  0  1  Y  N  N   1.560  -7.358  32.115   5.338   0.206   2.065  C27  C5R  17  
C5R  C26  C14  C  0  1  Y  N  N  -0.075  -6.766  33.512   5.059  -1.868   1.245  C26  C5R  18  
C5R  C31  C15  C  0  1  Y  N  N  -0.941  -6.248  34.491   4.978  -3.233   0.989  C31  C5R  19  
C5R  C30  C16  C  0  1  Y  N  N  -2.282  -6.658  34.569   4.546  -3.674  -0.242  C30  C5R  20  
C5R  C29  C17  C  0  1  Y  N  N  -2.762  -7.600  33.659   4.190  -2.769  -1.233  C29  C5R  21  
C5R  C28  C18  C  0  1  Y  N  N  -1.880  -8.106  32.688   4.261  -1.424  -1.003  C28  C5R  22  
C5R  C25  C19  C  0  1  Y  N  N  -0.557  -7.700  32.618   4.696  -0.955   0.238  C25  C5R  23  
C5R  C1   C20  C  0  1  N  N  N   2.474  -7.919  28.311   1.065   0.908  -0.101  C1   C5R  24  
C5R  O1   O3   O  0  1  N  N  N   2.770  -9.103  28.192   0.591   1.542   0.818  O1   C5R  25  
C5R  C2   C21  C  0  1  N  N  R   3.410  -6.852  27.778   0.206  -0.108  -0.849  C2   C5R  26  
C5R  C3   C22  C  0  1  N  N  N   4.661  -7.568  27.280   0.908  -1.461  -0.738  C3   C5R  27  
C5R  C19  C23  C  0  1  N  N  N   3.771  -5.890  28.916   0.167   0.347  -2.309  C19  C5R  28  
C5R  C18  C24  C  0  1  N  N  N   4.479  -4.632  28.430  -0.900  -0.388  -3.111  C18  C5R  29  
C5R  C17  C25  C  0  1  N  N  N   3.661  -3.888  27.382  -2.273  -0.178  -2.471  C17  C5R  30  
C5R  C5   C26  C  0  1  N  N  S   3.276  -4.775  26.188  -2.267  -0.753  -1.057  C5   C5R  31  
C5R  C20  C27  C  0  1  N  N  N   4.500  -4.970  25.280  -2.120  -2.272  -1.142  C20  C5R  32  
C5R  C4   C28  C  0  1  N  N  R   2.618  -6.070  26.722  -1.171  -0.112  -0.226  C4   C5R  33  
C5R  C16  C29  C  0  1  N  N  N   2.064  -6.944  25.593  -1.199  -0.697   1.184  C16  C5R  34  
C5R  C15  C30  C  0  1  N  N  N   0.954  -6.184  24.878  -2.468  -0.200   1.880  C15  C5R  35  
C5R  C14  C31  C  0  1  Y  N  N   1.227  -4.701  24.684  -3.666  -0.231   0.972  C14  C5R  36  
C5R  H1   H1   H  0  1  N  N  N   1.180  -6.532  28.970   2.727   0.595  -1.198  H1   C5R  37  
C5R  H2   H2   H  0  1  N  N  N   3.244  -2.122  25.522  -4.693  -0.707  -2.208  H2   C5R  38  
C5R  H3   H3   H  0  1  N  N  N   1.670  -0.878  24.109  -6.871  -0.273  -1.175  H3   C5R  39  
C5R  H4   H4   H  0  1  N  N  N  -1.083  -2.595  22.237  -7.255   0.452   2.491  H4   C5R  40  
C5R  H5   H5   H  0  1  N  N  N   0.963  -1.711  21.156  -8.168   1.318  -0.290  H5   C5R  41  
C5R  H6   H6   H  0  1  N  N  N  -0.412  -0.561  21.037  -8.998   1.694   1.239  H6   C5R  42  
C5R  H7   H7   H  0  1  N  N  N   0.902  -0.271  22.227  -7.381   2.363   0.916  H7   C5R  43  
C5R  H8   H8   H  0  1  N  N  N  -1.951  -1.626  24.349  -7.851  -1.818   1.690  H8   C5R  44  
C5R  H9   H9   H  0  1  N  N  N  -0.853  -0.218  24.150  -9.273  -0.748   1.691  H9   C5R  45  
C5R  H10  H10  H  0  1  N  N  N  -2.166  -0.508  22.960  -8.443  -1.124   0.162  H10  C5R  46  
C5R  H11  H11  H  0  1  N  N  N  -0.459  -4.498  23.375  -4.973   0.216   2.608  H11  C5R  47  
C5R  H12  H12  H  0  1  N  N  N   1.859  -5.954  33.658   5.742  -1.502   3.187  H12  C5R  48  
C5R  H13  H13  H  0  1  N  N  N  -2.840  -7.622  29.274   3.429   5.364  -0.224  H13  C5R  49  
C5R  H14  H14  H  0  1  N  N  N   0.154  -9.191  28.479   2.897   2.077   1.313  H14  C5R  50  
C5R  H15  H15  H  0  1  N  N  N  -0.482  -9.738  30.744   4.904   1.606  -0.937  H15  C5R  51  
C5R  H16  H16  H  0  1  N  N  N   1.305  -9.668  30.579   5.267   2.468   0.578  H16  C5R  52  
C5R  H17  H17  H  0  1  N  N  N   2.528  -7.399  31.637   5.576   1.003   2.754  H17  C5R  53  
C5R  H18  H18  H  0  1  N  N  N  -0.568  -5.521  35.197   5.254  -3.945   1.753  H18  C5R  54  
C5R  H19  H19  H  0  1  N  N  N  -2.935  -6.248  35.326   4.485  -4.734  -0.439  H19  C5R  55  
C5R  H20  H20  H  0  1  N  N  N  -3.788  -7.933  33.699   3.853  -3.131  -2.193  H20  C5R  56  
C5R  H21  H21  H  0  1  N  N  N  -2.244  -8.832  31.976   3.982  -0.726  -1.779  H21  C5R  57  
C5R  H22  H22  H  0  1  N  N  N   5.143  -8.091  28.119   0.900  -1.790   0.301  H22  C5R  58  
C5R  H23  H23  H  0  1  N  N  N   4.382  -8.297  26.505   0.385  -2.192  -1.355  H23  C5R  59  
C5R  H24  H24  H  0  1  N  N  N   5.360  -6.832  26.856   1.938  -1.365  -1.082  H24  C5R  60  
C5R  H25  H25  H  0  1  N  N  N   2.846  -5.594  29.432  -0.035   1.422  -2.342  H25  C5R  61  
C5R  H26  H26  H  0  1  N  N  N   4.433  -6.414  29.621   1.145   0.169  -2.764  H26  C5R  62  
C5R  H27  H27  H  0  1  N  N  N   5.446  -4.916  27.990  -0.923   0.024  -4.128  H27  C5R  63  
C5R  H28  H28  H  0  1  N  N  N   4.648  -3.965  29.288  -0.663  -1.445  -3.184  H28  C5R  64  
C5R  H29  H29  H  0  1  N  N  N   4.253  -3.038  27.012  -2.500   0.888  -2.430  H29  C5R  65  
C5R  H30  H30  H  0  1  N  N  N   2.740  -3.515  27.854  -3.031  -0.686  -3.070  H30  C5R  66  
C5R  H31  H31  H  0  1  N  N  N   5.287  -5.503  25.834  -2.992  -2.694  -1.642  H31  C5R  67  
C5R  H32  H32  H  0  1  N  N  N   4.211  -5.558  24.396  -1.222  -2.519  -1.708  H32  C5R  68  
C5R  H33  H33  H  0  1  N  N  N   4.879  -3.988  24.959  -2.041  -2.686  -0.137  H33  C5R  69  
C5R  H34  H34  H  0  1  N  N  N   1.724  -5.718  27.258  -1.462   0.963  -0.110  H34  C5R  70  
C5R  H35  H35  H  0  1  N  N  N   1.661  -7.877  26.013  -1.186  -1.781   1.176  H35  C5R  71  
C5R  H36  H36  H  0  1  N  N  N   2.868  -7.180  24.880  -0.334  -0.345   1.755  H36  C5R  72  
C5R  H37  H37  H  0  1  N  N  N   0.031  -6.289  25.468  -2.663  -0.831   2.749  H37  C5R  73  
C5R  H38  H38  H  0  1  N  N  N   0.810  -6.639  23.887  -2.305   0.824   2.221  H38  C5R  74  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
C5R  C11  C10  SING  N  N   1  
C5R  C10  C12  SING  N  N   2  
C5R  C10  C9   SING  N  N   3  
C5R  C9   C13  DOUB  Y  N   4  
C5R  C9   C8   SING  Y  N   5  
C5R  C13  C14  SING  Y  N   6  
C5R  C8   C7   DOUB  Y  N   7  
C5R  C14  C15  SING  N  N   8  
C5R  C14  C6   DOUB  Y  N   9  
C5R  C15  C16  SING  N  N  10  
C5R  C7   C6   SING  Y  N  11  
C5R  C20  C5   SING  N  N  12  
C5R  C6   C5   SING  N  N  13  
C5R  C16  C4   SING  N  N  14  
C5R  C5   C4   SING  N  N  15  
C5R  C5   C17  SING  N  N  16  
C5R  C4   C2   SING  N  N  17  
C5R  C3   C2   SING  N  N  18  
C5R  C17  C18  SING  N  N  19  
C5R  C2   C1   SING  N  N  20  
C5R  C2   C19  SING  N  N  21  
C5R  O1   C1   DOUB  N  N  22  
C5R  C1   N1   SING  N  N  23  
C5R  C18  C19  SING  N  N  24  
C5R  N1   C21  SING  N  N  25  
C5R  O2   C22  DOUB  N  N  26  
C5R  C22  C21  SING  N  N  27  
C5R  C22  O3   SING  N  N  28  
C5R  C21  C23  SING  N  N  29  
C5R  C23  C24  SING  N  N  30  
C5R  C24  C27  DOUB  Y  N  31  
C5R  C24  C25  SING  Y  N  32  
C5R  C27  N2   SING  Y  N  33  
C5R  C25  C28  SING  Y  N  34  
C5R  C25  C26  DOUB  Y  N  35  
C5R  C28  C29  DOUB  Y  N  36  
C5R  N2   C26  SING  Y  N  37  
C5R  C26  C31  SING  Y  N  38  
C5R  C29  C30  SING  Y  N  39  
C5R  C31  C30  DOUB  Y  N  40  
C5R  N1   H1   SING  N  N  41  
C5R  C7   H2   SING  N  N  42  
C5R  C8   H3   SING  N  N  43  
C5R  C10  H4   SING  N  N  44  
C5R  C11  H5   SING  N  N  45  
C5R  C11  H6   SING  N  N  46  
C5R  C11  H7   SING  N  N  47  
C5R  C12  H8   SING  N  N  48  
C5R  C12  H9   SING  N  N  49  
C5R  C12  H10  SING  N  N  50  
C5R  C13  H11  SING  N  N  51  
C5R  N2   H12  SING  N  N  52  
C5R  O3   H13  SING  N  N  53  
C5R  C21  H14  SING  N  N  54  
C5R  C23  H15  SING  N  N  55  
C5R  C23  H16  SING  N  N  56  
C5R  C27  H17  SING  N  N  57  
C5R  C31  H18  SING  N  N  58  
C5R  C30  H19  SING  N  N  59  
C5R  C29  H20  SING  N  N  60  
C5R  C28  H21  SING  N  N  61  
C5R  C3   H22  SING  N  N  62  
C5R  C3   H23  SING  N  N  63  
C5R  C3   H24  SING  N  N  64  
C5R  C19  H25  SING  N  N  65  
C5R  C19  H26  SING  N  N  66  
C5R  C18  H27  SING  N  N  67  
C5R  C18  H28  SING  N  N  68  
C5R  C17  H29  SING  N  N  69  
C5R  C17  H30  SING  N  N  70  
C5R  C20  H31  SING  N  N  71  
C5R  C20  H32  SING  N  N  72  
C5R  C20  H33  SING  N  N  73  
C5R  C4   H34  SING  N  N  74  
C5R  C16  H35  SING  N  N  75  
C5R  C16  H36  SING  N  N  76  
C5R  C15  H37  SING  N  N  77  
C5R  C15  H38  SING  N  N  78  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
C5R  InChI             InChI                 1.03   "InChI=1S/C31H38N2O3/c1-19(2)20-10-12-24-21(16-20)11-13-27-30(24,3)14-7-15-31(27,4)29(36)33-26(28(34)35)17-22-18-32-25-9-6-5-8-23(22)25/h5-6,8-10,12,16,18-19,26-27,32H,7,11,13-15,17H2,1-4H3,(H,33,36)(H,34,35)/t26-,27+,30+,31+/m0/s1"  
C5R  InChIKey          InChI                 1.03   WYAQKAIGBDDJPR-QKOWHPQASA-N  
C5R  SMILES_CANONICAL  CACTVS                3.385  "CC(C)c1ccc2c(CC[C@H]3[C@@](C)(CCC[C@]23C)C(=O)N[C@@H](Cc4c[nH]c5ccccc45)C(O)=O)c1"  
C5R  SMILES            CACTVS                3.385  "CC(C)c1ccc2c(CC[CH]3[C](C)(CCC[C]23C)C(=O)N[CH](Cc4c[nH]c5ccccc45)C(O)=O)c1"  
C5R  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CC(C)c1ccc2c(c1)CC[C@@H]3[C@@]2(CCC[C@@]3(C)C(=O)N[C@@H](Cc4c[nH]c5c4cccc5)C(=O)O)C"  
C5R  SMILES            "OpenEye OEToolkits"  2.0.6  "CC(C)c1ccc2c(c1)CCC3C2(CCCC3(C)C(=O)NC(Cc4c[nH]c5c4cccc5)C(=O)O)C"  
#
_pdbx_chem_comp_identifier.comp_id          C5R
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "(2~{S})-2-[[(1~{R},4~{a}~{S},10~{a}~{R})-1,4~{a}-dimethyl-7-propan-2-yl-2,3,4,9,10,10~{a}-hexahydrophenanthren-1-yl]carbonylamino]-3-(1~{H}-indol-3-yl)propanoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
C5R  "Create component"  2019-04-10  PDBJ  
C5R  "Initial release"   2020-03-18  RCSB  
C5R  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     C5R
_pdbx_chem_comp_synonyms.name        N-Dehydroabietoyl-L-Tryptophan
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
