data_BLR
# 
_chem_comp.id                                    BLR 
_chem_comp.name                                  "3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C33 H36 N4 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Bilirubin IX alpha" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-01-26 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        584.662 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     BLR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4I3B 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
BLR CHA CHA C 0 1 N N N N N N -8.135 2.080  58.577 -0.126 0.351  1.624  CHA BLR 1  
BLR NA  NA  N 0 1 Y N N N N N -7.497 0.727  56.538 1.996  0.700  0.257  NA  BLR 2  
BLR C1A C1A C 0 1 Y N N N N N -7.792 1.926  57.106 0.707  1.008  0.554  C1A BLR 3  
BLR C2A C2A C 0 1 Y N N N N N -7.604 2.929  56.169 0.292  2.004  -0.268 C2A BLR 4  
BLR C3A C3A C 0 1 Y N N N N N -7.165 2.301  55.003 1.352  2.336  -1.113 C3A BLR 5  
BLR C4A C4A C 0 1 Y N N N N N -7.113 0.936  55.256 2.418  1.515  -0.770 C4A BLR 6  
BLR CMA CMA C 0 1 N N N N N N -6.831 2.965  53.701 1.345  3.392  -2.188 CMA BLR 7  
BLR CAA CAA C 0 1 N N N N N N -7.847 4.391  56.379 -1.074 2.640  -0.269 CAA BLR 8  
BLR CBA CBA C 0 1 N N N N N N -6.603 5.160  56.586 -1.082 3.835  0.686  CBA BLR 9  
BLR CGA CGA C 0 1 N N N N N N -6.829 6.619  56.760 -2.448 4.471  0.685  CGA BLR 10 
BLR O1A O1A O 0 1 N N N N N N -7.928 7.065  57.200 -2.690 5.544  1.454  O1A BLR 11 
BLR O2A O2A O 0 1 N N N N N N -5.866 7.390  56.403 -3.326 4.015  -0.009 O2A BLR 12 
BLR CHB CHB C 0 1 N N N N N N -6.713 -0.077 54.265 3.693  1.510  -1.370 CHB BLR 13 
BLR NB  NB  N 0 1 N N N N N N -7.574 -2.116 55.329 4.749  0.450  0.590  NB  BLR 14 
BLR C1B C1B C 0 1 N N N N N N -6.924 -1.432 54.278 4.760  0.919  -0.719 C1B BLR 15 
BLR C2B C2B C 0 1 N N N N N N -6.525 -2.376 53.313 6.029  0.693  -1.273 C2B BLR 16 
BLR C3B C3B C 0 1 N N N N N N -6.884 -3.563 53.644 6.806  0.082  -0.299 C3B BLR 17 
BLR C4B C4B C 0 1 N N N N N N -7.585 -3.597 54.993 5.961  -0.057 0.888  C4B BLR 18 
BLR CMB CMB C 0 1 N N N N N N -5.787 -1.983 52.048 6.466  1.046  -2.671 CMB BLR 19 
BLR OB  OB  O 0 1 N N N N N N -8.062 -4.443 55.666 6.292  -0.550 1.953  OB  BLR 20 
BLR CAB CAB C 0 1 N N N N N N -6.672 -4.821 52.886 8.211  -0.341 -0.433 CAB BLR 21 
BLR CBB CBB C 0 1 N N N N N N -7.074 -6.057 53.311 8.832  -0.918 0.590  CBB BLR 22 
BLR NC  NC  N 0 1 N N N N N N -8.011 6.648  61.225 -4.975 -0.188 0.583  NC  BLR 23 
BLR C1C C1C C 0 1 N N N N N N -8.643 7.958  61.723 -6.192 0.380  0.539  C1C BLR 24 
BLR C2C C2C C 0 1 N N N N N N -7.433 8.819  61.845 -7.035 -0.355 -0.301 C2C BLR 25 
BLR C3C C3C C 0 1 N N N N N N -6.360 8.197  61.495 -6.312 -1.429 -0.804 C3C BLR 26 
BLR C4C C4C C 0 1 N N N N N N -6.598 6.894  61.096 -4.967 -1.315 -0.231 C4C BLR 27 
BLR CMC CMC C 0 1 N N N N N N -7.580 10.237 62.283 -8.476 -0.037 -0.607 CMC BLR 28 
BLR OC  OC  O 0 1 N N N N N N -9.804 8.138  61.963 -6.515 1.389  1.145  OC  BLR 29 
BLR CAC CAC C 0 1 N N N N N N -4.999 8.761  61.447 -6.796 -2.468 -1.730 CAC BLR 30 
BLR CBC CBC C 0 1 N N N N N N -4.530 9.637  62.369 -7.927 -3.116 -1.468 CBC BLR 31 
BLR CHD CHD C 0 1 N N N N N N -5.718 5.958  60.661 -3.905 -2.164 -0.451 CHD BLR 32 
BLR ND  ND  N 0 1 Y N N N N N -7.223 4.111  59.725 -2.231 -0.645 0.589  ND  BLR 33 
BLR C1D C1D C 0 1 Y N N N N N -6.039 4.648  60.073 -2.637 -1.864 0.091  C1D BLR 34 
BLR C2D C2D C 0 1 Y N N N N N -5.003 3.650  59.736 -1.572 -2.741 0.222  C2D BLR 35 
BLR C3D C3D C 0 1 Y N N N N N -5.622 2.548  59.205 -0.522 -2.027 0.805  C3D BLR 36 
BLR C4D C4D C 0 1 Y N N N N N -7.071 2.809  59.148 -0.946 -0.756 1.013  C4D BLR 37 
BLR CMD CMD C 0 1 N N N N N N -3.550 3.875  59.994 -1.550 -4.191 -0.188 CMD BLR 38 
BLR CAD CAD C 0 1 N N N N N N -4.919 1.315  58.705 0.843  -2.572 1.138  CAD BLR 39 
BLR CBD CBD C 0 1 N N N N N N -4.990 0.208  59.738 1.776  -2.378 -0.059 CBD BLR 40 
BLR CGD CGD C 0 1 N N N N N N -6.278 -0.526 59.644 3.141  -2.923 0.275  CGD BLR 41 
BLR O1D O1D O 0 1 N N N N N N -7.022 -0.570 60.640 4.128  -2.861 -0.632 O1D BLR 42 
BLR O2D O2D O 0 1 N N N N N N -6.611 -1.134 58.600 3.346  -3.416 1.359  O2D BLR 43 
BLR H1  H1  H 0 1 N N N N N N -9.081 2.629  58.694 0.528  -0.062 2.392  H1  BLR 44 
BLR H2  H2  H 0 1 N N N N N N -8.222 1.093  59.055 -0.791 1.090  2.072  H2  BLR 45 
BLR H3  H3  H 0 1 N N N N N N -7.554 -0.162 56.992 2.531  0.021  0.698  H3  BLR 46 
BLR H4  H4  H 0 1 N N N N N N -7.735 3.025  53.077 1.026  2.949  -3.131 H4  BLR 47 
BLR H5  H5  H 0 1 N N N N N N -6.451 3.979  53.894 0.655  4.189  -1.909 H5  BLR 48 
BLR H6  H6  H 0 1 N N N N N N -6.062 2.378  53.177 2.348  3.803  -2.300 H6  BLR 49 
BLR H7  H7  H 0 1 N N N N N N -8.363 4.791  55.494 -1.317 2.979  -1.277 H7  BLR 50 
BLR H8  H8  H 0 1 N N N N N N -8.488 4.516  57.264 -1.816 1.910  0.056  H8  BLR 51 
BLR H9  H9  H 0 1 N N N N N N -6.102 4.776  57.487 -0.840 3.496  1.693  H9  BLR 52 
BLR H10 H10 H 0 1 N N N N N N -5.952 5.010  55.712 -0.341 4.565  0.360  H10 BLR 53 
BLR H11 H11 H 0 1 N N N N N N -7.902 8.015  57.213 -3.581 5.917  1.420  H11 BLR 54 
BLR H12 H12 H 0 1 N N N N N N -6.178 0.301  53.406 3.837  1.969  -2.337 H12 BLR 55 
BLR H13 H13 H 0 1 N N N N N N -7.960 -1.698 56.151 3.991  0.487  1.194  H13 BLR 56 
BLR H14 H14 H 0 1 N N N N N N -5.618 -0.896 52.044 7.504  0.746  -2.814 H14 BLR 57 
BLR H15 H15 H 0 1 N N N N N N -4.819 -2.504 52.011 5.835  0.525  -3.392 H15 BLR 58 
BLR H16 H16 H 0 1 N N N N N N -6.388 -2.264 51.171 6.375  2.122  -2.820 H16 BLR 59 
BLR H17 H17 H 0 1 N N N N N N -6.166 -4.756 51.934 8.737  -0.182 -1.363 H17 BLR 60 
BLR H18 H18 H 0 1 N N N N N N -6.882 -6.927 52.700 8.306  -1.077 1.520  H18 BLR 61 
BLR H19 H19 H 0 1 N N N N N N -7.583 -6.163 54.257 9.862  -1.228 0.492  H19 BLR 62 
BLR H20 H20 H 0 1 N N N N N N -8.488 5.791  61.029 -4.220 0.139  1.098  H20 BLR 63 
BLR H21 H21 H 0 1 N N N N N N -8.636 10.444 62.509 -8.771 0.864  -0.069 H21 BLR 64 
BLR H22 H22 H 0 1 N N N N N N -6.972 10.407 63.184 -8.593 0.124  -1.678 H22 BLR 65 
BLR H23 H23 H 0 1 N N N N N N -7.239 10.906 61.479 -9.106 -0.869 -0.293 H23 BLR 66 
BLR H24 H24 H 0 1 N N N N N N -4.346 8.463  60.640 -6.233 -2.702 -2.621 H24 BLR 67 
BLR H25 H25 H 0 1 N N N N N N -3.524 10.020 62.287 -8.251 -3.918 -2.115 H25 BLR 68 
BLR H26 H26 H 0 1 N N N N N N -5.163 9.952  63.186 -8.520 -2.842 -0.608 H26 BLR 69 
BLR H27 H27 H 0 1 N N N N N N -4.670 6.200  60.756 -4.043 -3.061 -1.037 H27 BLR 70 
BLR H28 H28 H 0 1 N N N N N N -8.104 4.567  59.854 -2.772 0.160  0.626  H28 BLR 71 
BLR H29 H29 H 0 1 N N N N N N -3.088 4.342  59.112 -1.209 -4.271 -1.220 H29 BLR 72 
BLR H30 H30 H 0 1 N N N N N N -3.430 4.537  60.864 -0.872 -4.742 0.463  H30 BLR 73 
BLR H31 H31 H 0 1 N N N N N N -3.060 2.911  60.197 -2.554 -4.607 -0.104 H31 BLR 74 
BLR H32 H32 H 0 1 N N N N N N -5.401 0.975  57.776 1.245  -2.042 2.002  H32 BLR 75 
BLR H33 H33 H 0 1 N N N N N N -3.865 1.556  58.504 0.763  -3.635 1.369  H33 BLR 76 
BLR H34 H34 H 0 1 N N N N N N -4.162 -0.496 59.569 1.374  -2.908 -0.922 H34 BLR 77 
BLR H35 H35 H 0 1 N N N N N N -4.899 0.647  60.742 1.855  -1.316 -0.289 H35 BLR 78 
BLR H36 H36 H 0 1 N N N N N N -7.787 -1.098 60.442 4.986  -3.224 -0.372 H36 BLR 79 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
BLR CMB C2B SING N N 1  
BLR CAB CBB DOUB N N 2  
BLR CAB C3B SING N N 3  
BLR C2B C3B DOUB N N 4  
BLR C2B C1B SING N N 5  
BLR C3B C4B SING N N 6  
BLR CMA C3A SING N N 7  
BLR CHB C1B DOUB N Z 8  
BLR CHB C4A SING N N 9  
BLR C1B NB  SING N N 10 
BLR C4B NB  SING N N 11 
BLR C4B OB  DOUB N N 12 
BLR C3A C4A DOUB Y N 13 
BLR C3A C2A SING Y N 14 
BLR C4A NA  SING Y N 15 
BLR C2A CAA SING N N 16 
BLR C2A C1A DOUB Y N 17 
BLR CAA CBA SING N N 18 
BLR O2A CGA DOUB N N 19 
BLR NA  C1A SING Y N 20 
BLR CBA CGA SING N N 21 
BLR CGA O1A SING N N 22 
BLR C1A CHA SING N N 23 
BLR CHA C4D SING N N 24 
BLR O2D CGD DOUB N N 25 
BLR CAD C3D SING N N 26 
BLR CAD CBD SING N N 27 
BLR C4D C3D DOUB Y N 28 
BLR C4D ND  SING Y N 29 
BLR C3D C2D SING Y N 30 
BLR CGD CBD SING N N 31 
BLR CGD O1D SING N N 32 
BLR ND  C1D SING Y N 33 
BLR C2D CMD SING N N 34 
BLR C2D C1D DOUB Y N 35 
BLR C1D CHD SING N N 36 
BLR CHD C4C DOUB N Z 37 
BLR C4C NC  SING N N 38 
BLR C4C C3C SING N N 39 
BLR NC  C1C SING N N 40 
BLR CAC C3C SING N N 41 
BLR CAC CBC DOUB N N 42 
BLR C3C C2C DOUB N N 43 
BLR C1C C2C SING N N 44 
BLR C1C OC  DOUB N N 45 
BLR C2C CMC SING N N 46 
BLR CHA H1  SING N N 47 
BLR CHA H2  SING N N 48 
BLR NA  H3  SING N N 49 
BLR CMA H4  SING N N 50 
BLR CMA H5  SING N N 51 
BLR CMA H6  SING N N 52 
BLR CAA H7  SING N N 53 
BLR CAA H8  SING N N 54 
BLR CBA H9  SING N N 55 
BLR CBA H10 SING N N 56 
BLR O1A H11 SING N N 57 
BLR CHB H12 SING N N 58 
BLR NB  H13 SING N N 59 
BLR CMB H14 SING N N 60 
BLR CMB H15 SING N N 61 
BLR CMB H16 SING N N 62 
BLR CAB H17 SING N N 63 
BLR CBB H18 SING N N 64 
BLR CBB H19 SING N N 65 
BLR NC  H20 SING N N 66 
BLR CMC H21 SING N N 67 
BLR CMC H22 SING N N 68 
BLR CMC H23 SING N N 69 
BLR CAC H24 SING N N 70 
BLR CBC H25 SING N N 71 
BLR CBC H26 SING N N 72 
BLR CHD H27 SING N N 73 
BLR ND  H28 SING N N 74 
BLR CMD H29 SING N N 75 
BLR CMD H30 SING N N 76 
BLR CMD H31 SING N N 77 
BLR CAD H32 SING N N 78 
BLR CAD H33 SING N N 79 
BLR CBD H34 SING N N 80 
BLR CBD H35 SING N N 81 
BLR O1D H36 SING N N 82 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
BLR InChI            InChI                1.03  "InChI=1S/C33H36N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h7-8,13-14,34-35H,1-2,9-12,15H2,3-6H3,(H,36,43)(H,37,42)(H,38,39)(H,40,41)/b26-13-,27-14-" 
BLR InChIKey         InChI                1.03  BPYKTIZUTYGOLE-IFADSCNNSA-N                                                                                                                                                                                                                          
BLR SMILES_CANONICAL CACTVS               3.385 "CC1=C(C=C)C(/NC1=O)=C/c2[nH]c(Cc3[nH]c(\C=C4/NC(=O)C(=C4C)C=C)c(C)c3CCC(O)=O)c(CCC(O)=O)c2C"                                                                                                                                                        
BLR SMILES           CACTVS               3.385 "CC1=C(C=C)C(NC1=O)=Cc2[nH]c(Cc3[nH]c(C=C4NC(=O)C(=C4C)C=C)c(C)c3CCC(O)=O)c(CCC(O)=O)c2C"                                                                                                                                                            
BLR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1c(c([nH]c1/C=C\2/C(=C(C(=O)N2)C=C)C)Cc3c(c(c([nH]3)/C=C\4/C(=C(C(=O)N4)C)C=C)C)CCC(=O)O)CCC(=O)O"                                                                                                                                                
BLR SMILES           "OpenEye OEToolkits" 1.7.6 "Cc1c(c([nH]c1C=C2C(=C(C(=O)N2)C=C)C)Cc3c(c(c([nH]3)C=C4C(=C(C(=O)N4)C)C=C)C)CCC(=O)O)CCC(=O)O"                                                                                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           BLR 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   1.7.6 
_pdbx_chem_comp_identifier.identifier        "3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
BLR "Create component" 2015-01-26 PDBJ 
BLR "Initial release"  2015-02-04 RCSB 
BLR "Modify synonyms"  2021-03-01 PDBE 
BLR "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      BLR 
_pdbx_chem_comp_synonyms.name         "Bilirubin IX alpha" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            BLR 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               CBC 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
