data_91R
# 
_chem_comp.id                                    91R 
_chem_comp.name                                  "[[(2~{R},3~{S},5~{R})-5-[4-[(4~{S})-4,5-bis(oxidanyl)pent-1-ynyl]-2-nitro-pyrrol-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H21 N2 O16 P3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-04-22 
_chem_comp.pdbx_modified_date                    2017-06-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        566.242 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     91R 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5NKL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
91R N   N1  N 1  1 N N N 18.210 -20.653 -5.358  -5.349 -3.069 1.986  N   91R 1  
91R C   C1  C 0  1 Y N N 18.806 -19.498 -5.935  -4.948 -1.783 1.373  C   91R 2  
91R O   O1  O 0  1 N N N 17.869 -21.560 -6.113  -4.655 -4.058 1.835  O   91R 3  
91R C1  C2  C 0  1 Y N N 19.176 -18.351 -5.289  -5.622 -0.622 1.471  C1  91R 4  
91R C10 C3  C 0  1 N N N 17.339 -20.054 -8.911  -3.279 -3.390 -0.965 C10 91R 5  
91R C11 C4  C 0  1 N N S 17.565 -19.252 -10.186 -1.966 -3.643 -1.740 C11 91R 6  
91R C12 C5  C 0  1 N N R 18.894 -19.820 -10.665 -0.881 -2.968 -0.871 C12 91R 7  
91R C13 C6  C 0  1 N N N 19.664 -18.950 -11.629 0.179  -2.313 -1.758 C13 91R 8  
91R C2  C7  C 0  1 Y N N 19.709 -17.459 -6.263  -4.892 0.353  0.740  C2  91R 9  
91R C3  C8  C 0  1 N N N 20.227 -16.143 -6.074  -5.243 1.731  0.574  C3  91R 10 
91R C4  C9  C 0  1 N N N 20.645 -15.021 -6.006  -5.530 2.861  0.438  C4  91R 11 
91R C5  C10 C 0  1 N N N 21.020 -13.608 -6.090  -5.891 4.278  0.268  C5  91R 12 
91R C6  C11 C 0  1 N N S 22.526 -13.366 -6.010  -4.833 4.974  -0.592 C6  91R 13 
91R C7  C12 C 0  1 N N N 22.869 -11.998 -6.557  -5.270 6.413  -0.873 C7  91R 14 
91R C8  C13 C 0  1 Y N N 19.641 -18.083 -7.433  -3.796 -0.272 0.226  C8  91R 15 
91R C9  C14 C 0  1 N N R 18.751 -20.263 -8.375  -2.832 -2.592 0.280  C9  91R 16 
91R N1  N2  N 0  1 Y N N 19.084 -19.334 -7.276  -3.830 -1.574 0.619  N1  91R 17 
91R O1  O2  O -1 1 N N N 18.085 -20.703 -4.131  -6.371 -3.136 2.647  O1  91R 18 
91R O10 O3  O 0  1 N N N 15.795 -16.890 -11.523 3.859  2.103  -0.118 O10 91R 19 
91R O11 O4  O 0  1 N N N 16.600 -14.834 -12.651 5.450  0.396  1.095  O11 91R 20 
91R O12 O5  O 0  1 N N N 15.940 -13.448 -14.668 6.937  2.412  1.406  O12 91R 21 
91R O13 O6  O 0  1 N N N 17.686 -12.592 -13.084 7.042  0.615  3.175  O13 91R 22 
91R O14 O7  O 0  1 N N N 18.247 -14.463 -14.507 8.055  0.238  0.778  O14 91R 23 
91R O15 O8  O 0  1 N N N 19.649 -20.019 -9.454  -1.589 -1.966 -0.109 O15 91R 24 
91R O2  O9  O 0  1 N N N 22.933 -13.457 -4.636  -3.585 4.982  0.104  O2  91R 25 
91R O3  O10 O 0  1 N N N 24.271 -11.765 -6.562  -4.342 7.026  -1.770 O3  91R 26 
91R O4  O11 O 0  1 N N N 16.550 -19.493 -11.169 -1.717 -5.045 -1.857 O4  91R 27 
91R O5  O12 O 0  1 N N N 20.053 -17.762 -10.915 1.231  -1.796 -0.941 O5  91R 28 
91R O6  O13 O 0  1 N N N 20.107 -16.229 -12.911 2.073  0.092  -2.388 O6  91R 29 
91R O7  O14 O 0  1 N N N 20.422 -15.301 -10.584 3.380  -2.067 -2.431 O7  91R 30 
91R O8  O15 O 0  1 N N N 18.154 -16.168 -11.245 3.425  -0.481 -0.335 O8  91R 31 
91R O9  O16 O 0  1 N N N 17.354 -17.162 -13.433 5.425  0.612  -1.420 O9  91R 32 
91R P   P1  P 0  1 N N N 19.720 -16.330 -11.464 2.518  -1.038 -1.542 P   91R 33 
91R P1  P2  P 0  1 N N N 16.958 -16.343 -12.285 4.559  0.656  -0.221 P1  91R 34 
91R P2  P3  P 0  1 N N N 17.085 -13.817 -13.781 6.872  0.948  1.609  P2  91R 35 
91R H4  H1  H 0  1 N N N 19.081 -18.157 -4.231  -6.546 -0.462 2.006  H4  91R 36 
91R H12 H2  H 0  1 N N N 16.725 -19.490 -8.194  -3.970 -2.801 -1.568 H12 91R 37 
91R H13 H3  H 0  1 N N N 16.854 -21.017 -9.131  -3.738 -4.333 -0.669 H13 91R 38 
91R H2  H4  H 0  1 N N N 17.665 -18.181 -9.955  -2.009 -3.180 -2.726 H2  91R 39 
91R H3  H5  H 0  1 N N N 18.705 -20.792 -11.144 -0.421 -3.698 -0.204 H3  91R 40 
91R H15 H6  H 0  1 N N N 19.028 -18.683 -12.486 0.585  -3.053 -2.448 H15 91R 41 
91R H16 H7  H 0  1 N N N 20.557 -19.483 -11.987 -0.274 -1.499 -2.325 H16 91R 42 
91R H5  H8  H 0  1 N N N 20.538 -13.071 -5.260  -6.862 4.350  -0.223 H5  91R 43 
91R H6  H9  H 0  1 N N N 20.655 -13.208 -7.047  -5.940 4.760  1.244  H6  91R 44 
91R H   H10 H 0  1 N N N 23.041 -14.132 -6.609  -4.721 4.438  -1.534 H   91R 45 
91R H8  H11 H 0  1 N N N 22.384 -11.233 -5.932  -6.263 6.410  -1.323 H8  91R 46 
91R H9  H12 H 0  1 N N N 22.492 -11.923 -7.588  -5.297 6.973  0.062  H9  91R 47 
91R H11 H13 H 0  1 N N N 19.974 -17.669 -8.373  -3.030 0.188  -0.381 H11 91R 48 
91R H1  H14 H 0  1 N N N 18.849 -21.301 -8.023  -2.672 -3.263 1.124  H1  91R 49 
91R H24 H15 H 0  1 N N N 15.504 -17.699 -11.927 3.275  2.204  0.647  H24 91R 50 
91R H19 H16 H 0  1 N N N 17.212 -11.812 -13.349 7.879  0.919  3.553  H19 91R 51 
91R H20 H17 H 0  1 N N N 18.046 -14.527 -15.433 8.074  -0.725 0.865  H20 91R 52 
91R H7  H18 H 0  1 N N N 22.716 -14.317 -4.297  -3.611 5.444  0.953  H7  91R 53 
91R H10 H19 H 0  1 N N N 24.447 -10.899 -6.911  -4.557 7.942  -1.993 H10 91R 54 
91R H14 H20 H 0  1 N N N 15.723 -19.137 -10.865 -2.400 -5.527 -2.343 H14 91R 55 
91R H17 H21 H 0  1 N N N 20.995 -14.764 -11.119 3.704  -2.835 -1.941 H17 91R 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
91R O12 P2  DOUB N N 1  
91R O14 P2  SING N N 2  
91R P2  O13 SING N N 3  
91R P2  O11 SING N N 4  
91R O9  P1  DOUB N N 5  
91R O6  P   DOUB N N 6  
91R O11 P1  SING N N 7  
91R P1  O10 SING N N 8  
91R P1  O8  SING N N 9  
91R C13 O5  SING N N 10 
91R C13 C12 SING N N 11 
91R P   O8  SING N N 12 
91R P   O5  SING N N 13 
91R P   O7  SING N N 14 
91R O4  C11 SING N N 15 
91R C12 C11 SING N N 16 
91R C12 O15 SING N N 17 
91R C11 C10 SING N N 18 
91R O15 C9  SING N N 19 
91R C10 C9  SING N N 20 
91R C9  N1  SING N N 21 
91R C8  N1  SING Y N 22 
91R C8  C2  DOUB Y N 23 
91R N1  C   SING Y N 24 
91R O3  C7  SING N N 25 
91R C7  C6  SING N N 26 
91R C2  C3  SING N N 27 
91R C2  C1  SING Y N 28 
91R O   N   DOUB N N 29 
91R C5  C6  SING N N 30 
91R C5  C4  SING N N 31 
91R C3  C4  TRIP N N 32 
91R C6  O2  SING N N 33 
91R C   N   SING N N 34 
91R C   C1  DOUB Y N 35 
91R N   O1  SING N N 36 
91R C1  H4  SING N N 37 
91R C10 H12 SING N N 38 
91R C10 H13 SING N N 39 
91R C11 H2  SING N N 40 
91R C12 H3  SING N N 41 
91R C13 H15 SING N N 42 
91R C13 H16 SING N N 43 
91R C5  H5  SING N N 44 
91R C5  H6  SING N N 45 
91R C6  H   SING N N 46 
91R C7  H8  SING N N 47 
91R C7  H9  SING N N 48 
91R C8  H11 SING N N 49 
91R C9  H1  SING N N 50 
91R O10 H24 SING N N 51 
91R O13 H19 SING N N 52 
91R O14 H20 SING N N 53 
91R O2  H7  SING N N 54 
91R O3  H10 SING N N 55 
91R O4  H14 SING N N 56 
91R O7  H17 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
91R InChI            InChI                1.03  
"InChI=1S/C14H21N2O16P3/c17-7-10(18)3-1-2-9-4-13(16(20)21)15(6-9)14-5-11(19)12(30-14)8-29-34(25,26)32-35(27,28)31-33(22,23)24/h4,6,10-12,14,17-19H,3,5,7-8H2,(H,25,26)(H,27,28)(H2,22,23,24)/t10-,11-,12+,14+/m0/s1" 
91R InChIKey         InChI                1.03  JIVPAQSXWIKFCI-CIQGVGRVSA-N 
91R SMILES_CANONICAL CACTVS               3.385 "OC[C@@H](O)CC#Cc1cn([C@H]2C[C@H](O)[C@@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O2)c(c1)[N+]([O-])=O" 
91R SMILES           CACTVS               3.385 "OC[CH](O)CC#Cc1cn([CH]2C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O2)c(c1)[N+]([O-])=O" 
91R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1c(cn(c1[N+](=O)[O-])[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)C#CC[C@@H](CO)O" 
91R SMILES           "OpenEye OEToolkits" 2.0.6 "c1c(cn(c1[N+](=O)[O-])C2CC(C(O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)C#CCC(CO)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
91R "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[[(2~{R},3~{S},5~{R})-5-[4-[(4~{S})-4,5-bis(oxidanyl)pent-1-ynyl]-2-nitro-pyrrol-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
91R "Create component" 2017-04-22 EBI  
91R "Initial release"  2017-06-28 RCSB 
# 
