data_5AR
#

_chem_comp.id                                   5AR
_chem_comp.name                                 "(2S)-2-amino-4-[5-(4-aminobutyl)-1,3,4-oxadiazol-2-yl]butanoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H18 N4 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-08-31
_chem_comp.pdbx_modified_date                   2020-06-27
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       242.275
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5AR
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5DGJ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5AR  O01  O1   O  0  1  N  N  N  17.537  -56.316  136.406   5.461  -1.178   1.145  O01  5AR   1  
5AR  C02  C1   C  0  1  N  N  N  17.639  -57.420  136.849   5.126  -0.241   0.461  C02  5AR   2  
5AR  N18  N3   N  0  1  N  N  N  14.284  -54.088  132.920  -7.578  -1.042   0.240  N18  5AR   3  
5AR  C27  C17  C  0  1  N  N  S  16.662  -57.990  137.861   4.054  -0.415  -0.585  C27  5AR   4  
5AR  C28  C18  C  0  1  N  N  N  15.593  -58.790  137.121   2.723   0.111  -0.045  C28  5AR   5  
5AR  C29  C19  C  0  1  N  N  N  14.856  -59.728  138.107   1.665   0.049  -1.147  C29  5AR   6  
5AR  N35  N4   N  0  1  N  N  N  16.031  -56.917  138.585   3.920  -1.841  -0.914  N35  5AR   7  
5AR  H22  H22  H  0  1  N  N  N  14.317  -55.086  132.872  -8.290  -1.281  -0.433  H22  5AR   8  
5AR  H23  H23  H  0  1  N  N  N  13.775  -52.082  132.671  -5.972  -1.563  -1.010  H23  5AR   9  
5AR  H24  H24  H  0  1  N  N  N  12.604  -53.025  133.578  -6.467   0.145  -1.091  H24  5AR  10  
5AR  H29  H29  H  0  1  N  N  N  17.200  -58.656  138.552   4.328   0.140  -1.482  H29  5AR  11  
5AR  H30  H30  H  0  1  N  N  N  14.869  -58.097  136.667   2.406  -0.502   0.799  H30  5AR  12  
5AR  H31  H31  H  0  1  N  N  N  16.069  -59.392  136.333   2.847   1.143   0.283  H31  5AR  13  
5AR  H32  H32  H  0  1  N  N  N  15.157  -60.772  138.278   1.982   0.662  -1.991  H32  5AR  14  
5AR  H33  H33  H  0  1  N  N  N  14.300  -59.359  138.981   1.541  -0.984  -1.474  H33  5AR  15  
5AR  H35  H35  H  0  1  N  N  N  15.388  -57.296  139.251   3.667  -2.378  -0.099  H35  5AR  16  
5AR  N1   N5   N  0  1  Y  N  N       ?        ?        ?  -0.057   1.803  -0.648  N1   5AR  17  
5AR  N2   N6   N  0  1  Y  N  N       ?        ?        ?  -1.221   1.881  -0.105  N2   5AR  18  
5AR  C4   C24  C  0  1  Y  N  N       ?        ?        ?  -1.592   0.698   0.293  C4   5AR  19  
5AR  O1   O7   O  0  1  Y  N  N       ?        ?        ?  -0.606  -0.160  -0.020  O1   5AR  20  
5AR  C5   C25  C  0  1  Y  N  N       ?        ?        ?   0.354   0.567  -0.615  C5   5AR  21  
5AR  C1   C26  C  0  1  N  N  N       ?        ?        ?  -2.890   0.354   0.978  C1   5AR  22  
5AR  C2   C27  C  0  1  N  N  N       ?        ?        ?  -3.943  -0.002  -0.073  C2   5AR  23  
5AR  C3   C28  C  0  1  N  N  N       ?        ?        ?  -5.260  -0.351   0.623  C3   5AR  24  
5AR  C6   C29  C  0  1  N  N  N       ?        ?        ?  -6.313  -0.707  -0.428  C6   5AR  25  
5AR  H34  H34  H  0  1  N  N  N       ?        ?        ?  -2.736  -0.498   1.641  H34  5AR  26  
5AR  H45  H45  H  0  1  N  N  N       ?        ?        ?  -3.231   1.210   1.560  H45  5AR  27  
5AR  H46  H46  H  0  1  N  N  N       ?        ?        ?  -4.097   0.850  -0.736  H46  5AR  28  
5AR  H47  H47  H  0  1  N  N  N       ?        ?        ?  -3.601  -0.858  -0.655  H47  5AR  29  
5AR  H48  H48  H  0  1  N  N  N       ?        ?        ?  -5.106  -1.203   1.286  H48  5AR  30  
5AR  H49  H49  H  0  1  N  N  N       ?        ?        ?  -5.602   0.505   1.205  H49  5AR  31  
5AR  H2   H2   H  0  1  N  Y  N  15.129  -53.746  133.330  -7.883  -0.288   0.837  H2   5AR  32  
5AR  OXT  OXT  O  0  1  N  Y  N  18.733  -58.304  136.440   5.703   0.958   0.636  OXT  5AR  33  
5AR  HXT  HXT  H  0  1  N  Y  N  19.286  -57.855  135.811   6.382   1.023   1.321  HXT  5AR  34  
5AR  H1   H1   H  0  1  N  Y  N  16.728  -56.382  139.062   3.253  -1.978  -1.659  H1   5AR  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5AR  C6   N18  SING  N  N   1  
5AR  O01  C02  DOUB  N  N   2  
5AR  C02  C27  SING  N  N   3  
5AR  C28  C27  SING  N  N   4  
5AR  C28  C29  SING  N  N   5  
5AR  C27  N35  SING  N  N   6  
5AR  N18  H22  SING  N  N   7  
5AR  C6   H23  SING  N  N   8  
5AR  C6   H24  SING  N  N   9  
5AR  C27  H29  SING  N  N  10  
5AR  C28  H30  SING  N  N  11  
5AR  C28  H31  SING  N  N  12  
5AR  C29  H32  SING  N  N  13  
5AR  C29  H33  SING  N  N  14  
5AR  N35  H35  SING  N  N  15  
5AR  C29  C5   SING  N  N  16  
5AR  C5   N1   DOUB  Y  N  17  
5AR  N1   N2   SING  Y  N  18  
5AR  N2   C4   DOUB  Y  N  19  
5AR  C4   O1   SING  Y  N  20  
5AR  O1   C5   SING  Y  N  21  
5AR  C4   C1   SING  N  N  22  
5AR  C1   C2   SING  N  N  23  
5AR  C2   C3   SING  N  N  24  
5AR  C3   C6   SING  N  N  25  
5AR  C1   H34  SING  N  N  26  
5AR  C1   H45  SING  N  N  27  
5AR  C2   H46  SING  N  N  28  
5AR  C2   H47  SING  N  N  29  
5AR  C3   H48  SING  N  N  30  
5AR  C3   H49  SING  N  N  31  
5AR  N18  H2   SING  N  N  32  
5AR  C02  OXT  SING  N  N  33  
5AR  OXT  HXT  SING  N  N  34  
5AR  N35  H1   SING  N  N  35  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5AR  SMILES            ACDLabs               12.01  "O=C(C(N)CCc1nnc(o1)CCCCN)O"  
5AR  InChI             InChI                 1.03   "InChI=1S/C10H18N4O3/c11-6-2-1-3-8-13-14-9(17-8)5-4-7(12)10(15)16/h7H,1-6,11-12H2,(H,15,16)/t7-/m0/s1"  
5AR  InChIKey          InChI                 1.03   AXSUQOHGXNNCKE-ZETCQYMHSA-N  
5AR  SMILES_CANONICAL  CACTVS                3.385  "NCCCCc1oc(CC[C@H](N)C(O)=O)nn1"  
5AR  SMILES            CACTVS                3.385  "NCCCCc1oc(CC[CH](N)C(O)=O)nn1"  
5AR  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "C(CCN)Cc1nnc(o1)CC[C@@H](C(=O)O)N"  
5AR  SMILES            "OpenEye OEToolkits"  1.9.2  "C(CCN)Cc1nnc(o1)CCC(C(=O)O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5AR  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2S)-2-amino-4-[5-(4-aminobutyl)-1,3,4-oxadiazol-2-yl]butanoic acid"  
5AR  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.9.2  "(2S)-2-azanyl-4-[5-(4-azanylbutyl)-1,3,4-oxadiazol-2-yl]butanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5AR  "Create component"    2015-08-31  RCSB  
5AR  "Initial release"     2016-02-10  RCSB  
5AR  "Other modification"  2020-06-27  RCSB  
##
