data_1VR
# 
_chem_comp.id                                    1VR 
_chem_comp.name                                  "(3R)-3-amino-4-methylpentanoic acid" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C6 H13 N O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         beta-3-homovaline 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-06-21 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        131.173 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     1VR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4KGS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
1VR O   O   O 0 1 N N N Y N Y 6.003 0.278  -18.599 1.964  -0.876 -0.767 O   1VR 1  
1VR C   C   C 0 1 N N N Y N Y 6.143 0.768  -19.706 1.916  0.112  -0.073 C   1VR 2  
1VR CA  CA  C 0 1 N N N Y N N 5.830 -0.072 -20.920 0.587  0.623  0.420  CA  1VR 3  
1VR CB  CB  C 0 1 N N R Y N N 4.422 -0.612 -20.702 -0.531 -0.283 -0.096 CB  1VR 4  
1VR N   N   N 0 1 N N N Y Y N 3.574 0.499  -21.088 -0.387 -1.622 0.491  N   1VR 5  
1VR CG  CG  C 0 1 N N N N N N 4.136 -1.868 -21.528 -1.888 0.304  0.300  CG  1VR 6  
1VR CD2 CD2 C 0 1 N N N N N N 2.931 -2.618 -20.972 -2.037 1.698  -0.312 CD2 1VR 7  
1VR CD1 CD1 C 0 1 N N N N N N 3.925 -1.514 -22.997 -3.007 -0.603 -0.217 CD1 1VR 8  
1VR OXT OXT O 0 1 N Y N Y N Y 6.566 2.020  -19.880 3.048  0.751  0.262  OXT 1VR 9  
1VR HA1 HA1 H 0 1 N N N Y N N 6.548 -0.900 -21.008 0.581  0.624  1.510  HA1 1VR 10 
1VR HA2 HA2 H 0 1 N N N Y N N 5.867 0.543  -21.831 0.430  1.638  0.055  HA2 1VR 11 
1VR HB  HB  H 0 1 N N N Y N N 4.284 -0.843 -19.635 -0.469 -0.355 -1.182 HB  1VR 12 
1VR H   H   H 0 1 N N N Y Y N 3.793 1.297  -20.526 -0.442 -1.583 1.498  H   1VR 13 
1VR H2  H1  H 0 1 N Y N Y Y N 3.729 0.718  -22.051 -1.076 -2.257 0.117  H1  1VR 14 
1VR HG  HG  H 0 1 N N N N N N 5.013 -2.529 -21.458 -1.950 0.375  1.386  HG  1VR 15 
1VR H3  H3  H 0 1 N N N N N N 3.106 -2.862 -19.914 -3.004 2.117  -0.030 H3  1VR 16 
1VR H4  H4  H 0 1 N N N N N N 2.034 -1.987 -21.059 -1.240 2.344  0.056  H4  1VR 17 
1VR H5  H5  H 0 1 N N N N N N 2.782 -3.547 -21.542 -1.975 1.627  -1.398 H5  1VR 18 
1VR H6  H6  H 0 1 N N N N N N 4.806 -0.975 -23.375 -2.944 -0.674 -1.303 H6  1VR 19 
1VR H7  H7  H 0 1 N N N N N N 3.782 -2.436 -23.579 -2.900 -1.596 0.219  H7  1VR 20 
1VR H8  H8  H 0 1 N N N N N N 3.034 -0.876 -23.096 -3.973 -0.184 0.065  H8  1VR 21 
1VR HXT HXT H 0 1 N Y N Y N Y 6.724 2.422  -19.034 3.876  0.384  -0.075 HXT 1VR 22 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
1VR CD1 CG  SING N N 1  
1VR CG  CD2 SING N N 2  
1VR CG  CB  SING N N 3  
1VR N   CB  SING N N 4  
1VR CA  CB  SING N N 5  
1VR CA  C   SING N N 6  
1VR C   O   DOUB N N 7  
1VR C   OXT SING N N 8  
1VR CA  HA1 SING N N 9  
1VR CA  HA2 SING N N 10 
1VR CB  HB  SING N N 11 
1VR N   H   SING N N 12 
1VR N   H2  SING N N 13 
1VR CG  HG  SING N N 14 
1VR CD2 H3  SING N N 15 
1VR CD2 H4  SING N N 16 
1VR CD2 H5  SING N N 17 
1VR CD1 H6  SING N N 18 
1VR CD1 H7  SING N N 19 
1VR CD1 H8  SING N N 20 
1VR OXT HXT SING N N 21 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
1VR SMILES           ACDLabs              12.01 "O=C(O)CC(N)C(C)C"                                                         
1VR InChI            InChI                1.03  "InChI=1S/C6H13NO2/c1-4(2)5(7)3-6(8)9/h4-5H,3,7H2,1-2H3,(H,8,9)/t5-/m1/s1" 
1VR InChIKey         InChI                1.03  GLUJNGJDHCTUJY-RXMQYKEDSA-N                                                
1VR SMILES_CANONICAL CACTVS               3.370 "CC(C)[C@H](N)CC(O)=O"                                                     
1VR SMILES           CACTVS               3.370 "CC(C)[CH](N)CC(O)=O"                                                      
1VR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)[C@@H](CC(=O)O)N"                                                    
1VR SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C)C(CC(=O)O)N"                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
1VR "SYSTEMATIC NAME" ACDLabs              12.01 "(3R)-3-amino-4-methylpentanoic acid"   
1VR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(3R)-3-azanyl-4-methyl-pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
1VR "Create component" 2013-06-21 RCSB 
1VR "Initial release"  2013-09-04 RCSB 
1VR "Modify synonyms"  2021-03-01 PDBE 
1VR "Modify backbone"  2023-11-03 PDBE 
1VR "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      1VR 
_pdbx_chem_comp_synonyms.name         beta-3-homovaline 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            1VR 
_pdbx_chem_comp_pcm.modified_residue_id                VAL 
_pdbx_chem_comp_pcm.type                               "Beta-amino acid" 
_pdbx_chem_comp_pcm.category                           "Named protein modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
