data_PVQ
#

_chem_comp.id                                   PVQ
_chem_comp.name                                 "(S)-1-[2'-Amino-2'-carboxyethyl]-5,7-dihydropyrrolo[3,4-d]pyrimidin-2,4(1H,3H)-dione"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C9 H12 N4 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(2~{S})-2-azanyl-3-[2,4-bis(oxidanylidene)-6,7-dihydro-5~{H}-pyrrolo[3,4-d]pyrimidin-1-yl]propanoic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-04-28
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       240.216
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    PVQ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6YK3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PVQ  C1   C1   C  0  1  N  N  N  -22.158  -14.611  20.423  -2.720   0.902   0.119  C1   PVQ   1  
PVQ  C2   C2   C  0  1  N  N  N  -23.049  -15.128  22.629  -0.534   1.562  -0.375  C2   PVQ   2  
PVQ  C3   C3   C  0  1  N  N  N  -19.880  -13.034  22.874  -0.881  -2.241  -0.365  C3   PVQ   3  
PVQ  C4   C4   C  0  1  N  N  N  -21.050  -13.859  22.420  -1.040  -0.739  -0.300  C4   PVQ   4  
PVQ  C5   C5   C  0  1  N  N  N  -21.084  -13.937  21.096  -2.324  -0.451   0.003  C5   PVQ   5  
PVQ  C6   C6   C  0  1  N  N  N  -19.961  -13.222  20.444  -3.091  -1.743   0.157  C6   PVQ   6  
PVQ  C7   C7   C  0  1  N  N  N  -22.006  -14.381  24.679   1.248  -0.030  -0.819  C7   PVQ   7  
PVQ  C8   C8   C  0  1  N  N  S  -23.129  -13.457  25.197   2.060  -0.164   0.470  C8   PVQ   8  
PVQ  C9   C9   C  0  1  N  N  N  -23.401  -13.688  26.677   3.515  -0.360   0.130  C9   PVQ   9  
PVQ  N1   N1   N  0  1  N  N  N  -23.109  -15.156  21.259  -1.808   1.876  -0.074  N1   PVQ  10  
PVQ  N2   N2   N  0  1  N  N  N  -22.010  -14.425  23.238  -0.146   0.279  -0.489  N2   PVQ  11  
PVQ  N3   N3   N  0  1  N  N  N  -19.228  -12.652  21.596  -2.064  -2.796   0.333  N3   PVQ  12  
PVQ  N4   N4   N  0  1  N  N  N  -22.822  -12.025  24.968   1.906   1.055   1.275  N4   PVQ  13  
PVQ  O1   O1   O  0  1  N  N  N  -22.292  -14.731  19.199  -3.874   1.184   0.387  O1   PVQ  14  
PVQ  O2   O2   O  0  1  N  N  N  -23.894  -15.687  23.305   0.277   2.451  -0.547  O2   PVQ  15  
PVQ  O3   O3   O  0  1  N  N  N  -23.716  -14.850  27.011   4.280   0.573   0.187  O3   PVQ  16  
PVQ  O4   O4   O  0  1  N  N  N  -23.311  -12.709  27.459   3.961  -1.572  -0.237  O4   PVQ  17  
PVQ  H1   H1   H  0  1  N  N  N  -19.199  -13.625  23.504  -0.866  -2.574  -1.403  H1   PVQ  18  
PVQ  H2   H2   H  0  1  N  N  N  -19.326  -13.916  19.874  -3.737  -1.696   1.033  H2   PVQ  19  
PVQ  H3   H3   H  0  1  N  N  N  -22.163  -15.396  25.072   1.664   0.772  -1.429  H3   PVQ  20  
PVQ  H4   H4   H  0  1  N  N  N  -21.035  -13.999  25.026   1.290  -0.967  -1.374  H4   PVQ  21  
PVQ  H5   H5   H  0  1  N  N  N  -24.046  -13.707  24.643   1.701  -1.022   1.039  H5   PVQ  22  
PVQ  H6   H6   H  0  1  N  N  N  -23.898  -15.603  20.837  -2.071   2.807   0.004  H6   PVQ  23  
PVQ  H7   H7   H  0  1  N  N  N  -18.289  -12.996  21.591  -1.867  -2.949   1.311  H7   PVQ  24  
PVQ  H8   H8   H  0  1  N  N  N  -23.572  -11.463  25.317   2.232   1.866   0.770  H8   PVQ  25  
PVQ  H9   H9   H  0  1  N  N  N  -21.976  -11.785  25.445   0.948   1.175   1.571  H9   PVQ  26  
PVQ  H11  H11  H  0  1  N  N  N  -23.519  -12.989  28.343   4.902  -1.649  -0.445  H11  PVQ  27  
PVQ  H12  H12  H  0  1  N  N  N  -20.214  -12.145  23.429   0.034  -2.546   0.141  H12  PVQ  28  
PVQ  H13  H13  H  0  1  N  N  N  -20.329  -12.429  19.776  -3.682  -1.940  -0.738  H13  PVQ  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PVQ  O1  C1   DOUB  N  N   1  
PVQ  C1  C5   SING  N  N   2  
PVQ  C1  N1   SING  N  N   3  
PVQ  C6  C5   SING  N  N   4  
PVQ  C6  N3   SING  N  N   5  
PVQ  C5  C4   DOUB  N  N   6  
PVQ  N1  C2   SING  N  N   7  
PVQ  N3  C3   SING  N  N   8  
PVQ  C4  C3   SING  N  N   9  
PVQ  C4  N2   SING  N  N  10  
PVQ  C2  N2   SING  N  N  11  
PVQ  C2  O2   DOUB  N  N  12  
PVQ  N2  C7   SING  N  N  13  
PVQ  C7  C8   SING  N  N  14  
PVQ  N4  C8   SING  N  N  15  
PVQ  C8  C9   SING  N  N  16  
PVQ  C9  O3   DOUB  N  N  17  
PVQ  C9  O4   SING  N  N  18  
PVQ  C3  H1   SING  N  N  19  
PVQ  C6  H2   SING  N  N  20  
PVQ  C7  H3   SING  N  N  21  
PVQ  C7  H4   SING  N  N  22  
PVQ  C8  H5   SING  N  N  23  
PVQ  N1  H6   SING  N  N  24  
PVQ  N3  H7   SING  N  N  25  
PVQ  N4  H8   SING  N  N  26  
PVQ  N4  H9   SING  N  N  27  
PVQ  O4  H11  SING  N  N  28  
PVQ  C3  H12  SING  N  N  29  
PVQ  C6  H13  SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PVQ  InChI             InChI                 1.03   "InChI=1S/C9H12N4O4/c10-5(8(15)16)3-13-6-2-11-1-4(6)7(14)12-9(13)17/h5,11H,1-3,10H2,(H,15,16)(H,12,14,17)/t5-/m0/s1"  
PVQ  InChIKey          InChI                 1.03   PGFCMMRTCMWFGC-YFKPBYRVSA-N  
PVQ  SMILES_CANONICAL  CACTVS                3.385  "N[C@@H](CN1C(=O)NC(=O)C2=C1CNC2)C(O)=O"  
PVQ  SMILES            CACTVS                3.385  "N[CH](CN1C(=O)NC(=O)C2=C1CNC2)C(O)=O"  
PVQ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C1C2=C(CN1)N(C(=O)NC2=O)C[C@@H](C(=O)O)N"  
PVQ  SMILES            "OpenEye OEToolkits"  2.0.7  "C1C2=C(CN1)N(C(=O)NC2=O)CC(C(=O)O)N"  
#
_pdbx_chem_comp_identifier.comp_id          PVQ
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(2~{S})-2-azanyl-3-[2,4-bis(oxidanylidene)-6,7-dihydro-5~{H}-pyrrolo[3,4-d]pyrimidin-1-yl]propanoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PVQ  "Create component"  2020-04-28  PDBE  
PVQ  "Initial release"   2020-06-03  RCSB  
PVQ  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     PVQ
_pdbx_chem_comp_synonyms.name        "(2~{S})-2-azanyl-3-[2,4-bis(oxidanylidene)-6,7-dihydro-5~{H}-pyrrolo[3,4-d]pyrimidin-1-yl]propanoic acid"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
