data_IVQ
# 
_chem_comp.id                                    IVQ 
_chem_comp.name                                  "8-(5~{H}-[1,3]dioxolo[4,5-f]benzimidazol-6-ylmethyl)-7-(phenylmethyl)-3-propyl-purine-2,6-dione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H22 N6 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-14 
_chem_comp.pdbx_modified_date                    2022-09-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        458.469 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IVQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ZII 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IVQ C4  C1  C 0 1 Y N N -19.712 10.133 -17.807 1.985  -1.363 -0.057 C4  IVQ 1  
IVQ C5  C2  C 0 1 Y N N -20.363 9.081  -17.282 2.172  -0.288 0.804  C5  IVQ 2  
IVQ C6  C3  C 0 1 N N N -21.675 8.904  -17.508 3.068  -0.421 1.887  C6  IVQ 3  
IVQ C8  C4  C 0 1 Y N N -18.304 8.990  -16.698 0.727  0.253  -0.755 C8  IVQ 4  
IVQ N1  N1  N 0 1 N N N -22.357 9.828  -18.285 3.722  -1.588 2.060  N1  IVQ 5  
IVQ N3  N2  N 0 1 N N N -20.341 11.043 -18.566 2.683  -2.536 0.179  N3  IVQ 6  
IVQ CAG C5  C 0 1 Y N N -19.988 4.719  -16.190 3.480  3.099  0.695  CAG IVQ 7  
IVQ CAE C6  C 0 1 Y N N -20.047 3.621  -17.046 4.362  3.968  0.080  CAE IVQ 8  
IVQ CAD C7  C 0 1 Y N N -19.803 3.789  -18.409 3.938  4.753  -0.975 CAD IVQ 9  
IVQ CAF C8  C 0 1 Y N N -19.502 5.047  -18.924 2.631  4.668  -1.418 CAF IVQ 10 
IVQ CAH C9  C 0 1 Y N N -19.442 6.136  -18.062 1.748  3.798  -0.804 CAH IVQ 11 
IVQ CAV C10 C 0 1 Y N N -19.686 5.980  -16.693 2.175  3.010  0.249  CAV IVQ 12 
IVQ CAO C11 C 0 1 N N N -19.634 7.077  -15.816 1.213  2.063  0.918  CAO IVQ 13 
IVQ N7  N3  N 0 1 Y N N -19.461 8.357  -16.588 1.360  0.726  0.337  N7  IVQ 14 
IVQ O6  O1  O 0 1 N N N -22.316 7.955  -17.040 3.248  0.507  2.654  O6  IVQ 15 
IVQ C2  C12 C 0 1 N N N -21.658 10.912 -18.814 3.533  -2.620 1.220  C2  IVQ 16 
IVQ O2  O2  O 0 1 N N N -22.239 11.740 -19.509 4.136  -3.658 1.411  O2  IVQ 17 
IVQ CAL C13 C 0 1 N N N -19.590 12.198 -19.119 2.500  -3.687 -0.710 CAL IVQ 18 
IVQ CAK C14 C 0 1 N N N -19.285 13.252 -18.039 3.514  -3.614 -1.854 CAK IVQ 19 
IVQ CAA C15 C 0 1 N N N -20.579 13.905 -17.544 3.323  -4.815 -2.781 CAA IVQ 20 
IVQ N9  N4  N 0 1 Y N N -18.430 10.080 -17.434 1.101  -0.980 -0.982 N9  IVQ 21 
IVQ CAN C16 C 0 1 N N N -17.012 8.506  -16.047 -0.261 1.027  -1.589 CAN IVQ 22 
IVQ CAW C17 C 0 1 Y N N -15.962 8.240  -17.110 -1.661 0.714  -1.128 CAW IVQ 23 
IVQ NAP N5  N 0 1 Y N N -14.666 8.198  -16.835 -2.575 1.640  -0.726 NAP IVQ 24 
IVQ CBC C18 C 0 1 Y N N -14.040 7.946  -17.975 -3.727 0.957  -0.384 CBC IVQ 25 
IVQ CAI C19 C 0 1 Y N N -12.737 7.818  -18.242 -4.974 1.347  0.086  CAI IVQ 26 
IVQ CAX C20 C 0 1 Y N N -12.335 7.569  -19.486 -5.944 0.395  0.339  CAX IVQ 27 
IVQ OAT O3  O 0 1 N N N -11.074 7.400  -19.966 -7.225 0.516  0.798  OAT IVQ 28 
IVQ CAM C21 C 0 1 N N N -11.260 7.556  -21.393 -7.597 -0.800 1.250  CAM IVQ 29 
IVQ OAU O4  O 0 1 N N N -12.633 7.171  -21.644 -6.788 -1.681 0.449  OAU IVQ 30 
IVQ CAY C22 C 0 1 Y N N -13.242 7.437  -20.456 -5.674 -0.960 0.124  CAY IVQ 31 
IVQ CAJ C23 C 0 1 Y N N -14.547 7.558  -20.178 -4.439 -1.358 -0.343 CAJ IVQ 32 
IVQ CBD C24 C 0 1 Y N N -14.958 7.815  -18.940 -3.451 -0.402 -0.602 CBD IVQ 33 
IVQ NAS N6  N 0 1 Y N N -16.179 7.996  -18.406 -2.175 -0.479 -1.061 NAS IVQ 34 
IVQ H1  H1  H 0 1 N N N -23.335 9.719  -18.463 4.339  -1.684 2.803  H1  IVQ 35 
IVQ H2  H2  H 0 1 N N N -20.177 4.591  -15.134 3.812  2.487  1.520  H2  IVQ 36 
IVQ H3  H3  H 0 1 N N N -20.281 2.642  -16.655 5.384  4.035  0.426  H3  IVQ 37 
IVQ H4  H4  H 0 1 N N N -19.848 2.936  -19.070 4.627  5.432  -1.455 H4  IVQ 38 
IVQ H5  H5  H 0 1 N N N -19.317 5.175  -19.980 2.299  5.281  -2.242 H5  IVQ 39 
IVQ H6  H6  H 0 1 N N N -19.204 7.114  -18.454 0.727  3.733  -1.149 H6  IVQ 40 
IVQ H7  H7  H 0 1 N N N -20.570 7.125  -15.239 1.428  2.020  1.986  H7  IVQ 41 
IVQ H8  H8  H 0 1 N N N -18.785 6.951  -15.128 0.192  2.414  0.767  H8  IVQ 42 
IVQ H9  H9  H 0 1 N N N -18.641 11.836 -19.541 2.652  -4.608 -0.147 H9  IVQ 43 
IVQ H10 H10 H 0 1 N N N -20.190 12.666 -19.913 1.490  -3.673 -1.119 H10 IVQ 44 
IVQ H11 H11 H 0 1 N N N -18.778 12.766 -17.192 3.362  -2.693 -2.416 H11 IVQ 45 
IVQ H12 H12 H 0 1 N N N -18.629 14.026 -18.464 4.524  -3.628 -1.445 H12 IVQ 46 
IVQ H13 H13 H 0 1 N N N -20.341 14.654 -16.774 2.313  -4.802 -3.190 H13 IVQ 47 
IVQ H14 H14 H 0 1 N N N -21.088 14.395 -18.387 4.045  -4.764 -3.596 H14 IVQ 48 
IVQ H15 H15 H 0 1 N N N -21.237 13.135 -17.115 3.475  -5.737 -2.219 H15 IVQ 49 
IVQ H16 H16 H 0 1 N N N -17.210 7.578  -15.491 -0.072 2.095  -1.478 H16 IVQ 50 
IVQ H17 H17 H 0 1 N N N -16.642 9.277  -15.355 -0.152 0.745  -2.636 H17 IVQ 51 
IVQ H18 H18 H 0 1 N N N -14.242 8.331  -15.939 -2.442 2.600  -0.687 H18 IVQ 52 
IVQ H19 H19 H 0 1 N N N -12.011 7.917  -17.449 -5.186 2.392  0.254  H19 IVQ 53 
IVQ H20 H20 H 0 1 N N N -10.569 6.902  -21.945 -7.362 -0.921 2.308  H20 IVQ 54 
IVQ H21 H21 H 0 1 N N N -11.092 8.601  -21.691 -8.657 -0.980 1.071  H21 IVQ 55 
IVQ H22 H22 H 0 1 N N N -15.274 7.445  -20.969 -4.235 -2.405 -0.508 H22 IVQ 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IVQ OAU CAM SING N N 1  
IVQ OAU CAY SING N N 2  
IVQ CAM OAT SING N N 3  
IVQ CAY CAJ DOUB Y N 4  
IVQ CAY CAX SING Y N 5  
IVQ CAJ CBD SING Y N 6  
IVQ OAT CAX SING N N 7  
IVQ O2  C2  DOUB N N 8  
IVQ CAX CAI DOUB Y N 9  
IVQ CAL N3  SING N N 10 
IVQ CAL CAK SING N N 11 
IVQ CBD NAS SING Y N 12 
IVQ CBD CBC DOUB Y N 13 
IVQ CAF CAD DOUB Y N 14 
IVQ CAF CAH SING Y N 15 
IVQ C2  N3  SING N N 16 
IVQ C2  N1  SING N N 17 
IVQ N3  C4  SING N N 18 
IVQ CAD CAE SING Y N 19 
IVQ NAS CAW DOUB Y N 20 
IVQ N1  C6  SING N N 21 
IVQ CAI CBC SING Y N 22 
IVQ CAH CAV DOUB Y N 23 
IVQ CAK CAA SING N N 24 
IVQ CBC NAP SING Y N 25 
IVQ C4  N9  SING Y N 26 
IVQ C4  C5  DOUB Y N 27 
IVQ C6  C5  SING N N 28 
IVQ C6  O6  DOUB N N 29 
IVQ N9  C8  DOUB Y N 30 
IVQ C5  N7  SING Y N 31 
IVQ CAW NAP SING Y N 32 
IVQ CAW CAN SING N N 33 
IVQ CAE CAG DOUB Y N 34 
IVQ C8  N7  SING Y N 35 
IVQ C8  CAN SING N N 36 
IVQ CAV CAG SING Y N 37 
IVQ CAV CAO SING N N 38 
IVQ N7  CAO SING N N 39 
IVQ N1  H1  SING N N 40 
IVQ CAG H2  SING N N 41 
IVQ CAE H3  SING N N 42 
IVQ CAD H4  SING N N 43 
IVQ CAF H5  SING N N 44 
IVQ CAH H6  SING N N 45 
IVQ CAO H7  SING N N 46 
IVQ CAO H8  SING N N 47 
IVQ CAL H9  SING N N 48 
IVQ CAL H10 SING N N 49 
IVQ CAK H11 SING N N 50 
IVQ CAK H12 SING N N 51 
IVQ CAA H13 SING N N 52 
IVQ CAA H14 SING N N 53 
IVQ CAA H15 SING N N 54 
IVQ CAN H16 SING N N 55 
IVQ CAN H17 SING N N 56 
IVQ NAP H18 SING N N 57 
IVQ CAI H19 SING N N 58 
IVQ CAM H20 SING N N 59 
IVQ CAM H21 SING N N 60 
IVQ CAJ H22 SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IVQ InChI            InChI                1.06  "InChI=1S/C24H22N6O4/c1-2-8-29-22-21(23(31)28-24(29)32)30(12-14-6-4-3-5-7-14)20(27-22)11-19-25-15-9-17-18(34-13-33-17)10-16(15)26-19/h3-7,9-10H,2,8,11-13H2,1H3,(H,25,26)(H,28,31,32)" 
IVQ InChIKey         InChI                1.06  DXPLGNDECHMRIY-UHFFFAOYSA-N                                                                                                                                                            
IVQ SMILES_CANONICAL CACTVS               3.385 "CCCN1C(=O)NC(=O)c2n(Cc3ccccc3)c(Cc4[nH]c5cc6OCOc6cc5n4)nc12"                                                                                                                          
IVQ SMILES           CACTVS               3.385 "CCCN1C(=O)NC(=O)c2n(Cc3ccccc3)c(Cc4[nH]c5cc6OCOc6cc5n4)nc12"                                                                                                                          
IVQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCN1c2c(n(c(n2)Cc3[nH]c4cc5c(cc4n3)OCO5)Cc6ccccc6)C(=O)NC1=O"                                                                                                                        
IVQ SMILES           "OpenEye OEToolkits" 2.0.7 "CCCN1c2c(n(c(n2)Cc3[nH]c4cc5c(cc4n3)OCO5)Cc6ccccc6)C(=O)NC1=O"                                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           IVQ 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "8-(5~{H}-[1,3]dioxolo[4,5-f]benzimidazol-6-ylmethyl)-7-(phenylmethyl)-3-propyl-purine-2,6-dione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IVQ "Create component"  2022-04-14 PDBE 
IVQ "Modify descriptor" 2022-08-22 RCSB 
IVQ "Initial release"   2022-09-07 RCSB 
# 
