data_ADQ
#

_chem_comp.id                                   ADQ
_chem_comp.name                                 "ADENOSINE-5'-DIPHOSPHATE-GLUCOSE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H25 N5 O15 P2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "ADENOSINE-5'-MONOPHOSPHATE GLUCOPYRANOSYL-MONOPHOSPHATE ESTER"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2000-04-06
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       589.342
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ADQ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1EQ2
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ADQ  PB      PB      P  0  1  N  N  S  31.645  46.603  87.718  -0.941   0.240  -3.363  PB      ADQ   1  
ADQ  O1B     O1B     O  0  1  N  N  N  31.412  45.855  86.437  -2.379   0.329  -3.700  O1B     ADQ   2  
ADQ  O2B     O2B     O  0  1  N  N  N  33.005  47.520  87.719  -0.330   1.723  -3.223  O2B     ADQ   3  
ADQ  O3B     O3B     O  0  1  N  N  N  31.715  45.655  88.882  -0.165  -0.551  -4.530  O3B     ADQ   4  
ADQ  PA      PA      P  0  1  N  N  R  30.197  49.000  88.677  -1.560   0.296  -0.854  PA      ADQ   5  
ADQ  O1A     O1A     O  0  1  N  N  N  31.487  49.515  89.220  -2.989   0.384  -1.229  O1A     ADQ   6  
ADQ  O2A     O2A     O  0  1  N  N  N  29.235  48.772  89.775  -0.939   1.778  -0.756  O2A     ADQ   7  
ADQ  O3A     O3A     O  0  1  N  N  N  30.466  47.649  87.857  -0.763  -0.546  -1.970  O3A     ADQ   8  
ADQ  O5D     O5*     O  0  1  N  N  N  29.539  49.923  87.523  -1.424  -0.437   0.571  O5D     ADQ   9  
ADQ  C5D     C5*     C  0  1  N  N  N  29.943  51.286  87.281  -2.149   0.354   1.515  C5D     ADQ  10  
ADQ  C4D     C4*     C  0  1  N  N  R  30.152  51.408  85.774  -2.059  -0.291   2.899  C4D     ADQ  11  
ADQ  O4D     O4*     O  0  1  N  N  N  30.810  52.644  85.464  -0.684  -0.353   3.336  O4D     ADQ  12  
ADQ  C3D     C3*     C  0  1  N  N  S  31.027  50.310  85.219  -2.769   0.587   3.952  C3D     ADQ  13  
ADQ  O3D     O3*     O  0  1  N  N  N  30.425  49.698  84.083  -4.088   0.098   4.205  O3D     ADQ  14  
ADQ  C2D     C2*     C  0  1  N  N  R  32.366  50.944  84.841  -1.887   0.447   5.215  C2D     ADQ  15  
ADQ  O2D     O2*     O  0  1  N  N  N  32.685  50.738  83.454  -2.636  -0.129   6.287  O2D     ADQ  16  
ADQ  C1D     C1*     C  0  1  N  N  R  32.213  52.410  85.231  -0.748  -0.496   4.772  C1D     ADQ  17  
ADQ  N9      N9      N  0  1  Y  N  N  32.970  52.814  86.478   0.519  -0.087   5.382  N9      ADQ  18  
ADQ  C8      C8      C  0  1  Y  N  N  32.992  52.122  87.623   1.407   0.810   4.871  C8      ADQ  19  
ADQ  N7      N7      N  0  1  Y  N  N  33.891  52.671  88.457   2.425   0.935   5.673  N7      ADQ  20  
ADQ  C5      C5      C  0  1  Y  N  N  34.440  53.709  87.867   2.252   0.131   6.750  C5      ADQ  21  
ADQ  C6      C6      C  0  1  Y  N  N  35.398  54.667  88.215   3.003  -0.150   7.903  C6      ADQ  22  
ADQ  N6      N6      N  0  1  N  N  N  35.991  54.639  89.420   4.217   0.474   8.128  N6      ADQ  23  
ADQ  N1      N1      N  0  1  Y  N  N  35.732  55.641  87.325   2.517  -1.027   8.776  N1      ADQ  24  
ADQ  C2      C2      C  0  1  Y  N  N  35.159  55.710  86.113   1.360  -1.628   8.569  C2      ADQ  25  
ADQ  N3      N3      N  0  1  Y  N  N  34.239  54.806  85.769   0.626  -1.400   7.501  N3      ADQ  26  
ADQ  C4      C4      C  0  1  Y  N  N  33.851  53.806  86.589   1.029  -0.538   6.573  C4      ADQ  27  
ADQ  "C1'"   "C1'"   C  0  1  N  N  R  30.814  44.536  89.169  -0.359   0.192  -5.734  "C1'"   ADQ  28  
ADQ  "C2'"   "C2'"   C  0  1  N  N  R  30.276  44.550  90.634  -0.348  -0.762  -6.930  "C2'"   ADQ  29  
ADQ  "C3'"   "C3'"   C  0  1  N  N  S  31.431  44.330  91.681   0.989  -1.506  -6.964  "C3'"   ADQ  30  
ADQ  "C4'"   "C4'"   C  0  1  N  N  S  32.162  42.971  91.405   2.124  -0.475  -6.943  "C4'"   ADQ  31  
ADQ  "C5'"   "C5'"   C  0  1  N  N  R  32.566  42.878  89.893   1.927   0.457  -5.746  "C5'"   ADQ  32  
ADQ  "C6'"   "C6'"   C  0  1  N  N  N  33.142  41.499  89.453   3.074   1.469  -5.699  "C6'"   ADQ  33  
ADQ  "O2'"   "O2'"   O  0  1  N  N  N  29.596  45.824  90.911  -1.415  -1.703  -6.801  "O2'"   ADQ  34  
ADQ  "O3'"   "O3'"   O  0  1  N  N  N  30.885  44.427  93.030   1.076  -2.290  -8.156  "O3'"   ADQ  35  
ADQ  "O4'"   "O4'"   O  0  1  N  N  N  33.397  42.684  92.129   3.380  -1.146  -6.825  "O4'"   ADQ  36  
ADQ  "O5'"   "O5'"   O  0  1  N  N  N  31.501  43.273  88.943   0.687   1.151  -5.873  "O5'"   ADQ  37  
ADQ  "O6'"   "O6'"   O  0  1  N  N  N  32.165  40.710  88.694   2.896   2.338  -4.578  "O6'"   ADQ  38  
ADQ  HOB2    2HOB    H  0  0  N  N  N  33.152  47.993  88.529   0.605   1.620  -3.004  HOB2    ADQ  39  
ADQ  HOA2    2HOA    H  0  0  N  N  N  28.413  48.443  89.429  -0.010   1.676  -0.510  HOA2    ADQ  40  
ADQ  "H5'1"  1H5*    H  0  0  N  N  N  29.230  52.039  87.692  -3.193   0.417   1.210  "H5'1"  ADQ  41  
ADQ  "H5'2"  2H5*    H  0  0  N  N  N  30.831  51.597  87.878  -1.720   1.356   1.553  "H5'2"  ADQ  42  
ADQ  H4D     H4*     H  0  1  N  N  N  29.135  51.346  85.319  -2.497  -1.289   2.880  H4D     ADQ  43  
ADQ  H3D     H3*     H  0  1  N  N  N  31.169  49.508  85.981  -2.804   1.625   3.622  H3D     ADQ  44  
ADQ  "HO3'"  *HO3    H  0  0  N  N  N  30.975  49.007  83.733  -4.481   0.684   4.867  "HO3'"  ADQ  45  
ADQ  H2D     H2*     H  0  1  N  N  N  33.231  50.481  85.370  -1.485   1.416   5.510  H2D     ADQ  46  
ADQ  "HO2'"  *HO2    H  0  0  N  N  N  33.517  51.131  83.219  -3.366   0.476   6.476  "HO2'"  ADQ  47  
ADQ  H1D     H1*     H  0  1  N  N  N  32.638  53.017  84.398  -0.982  -1.526   5.041  H1D     ADQ  48  
ADQ  H8      H8      H  0  1  N  N  N  32.368  51.239  87.844   1.285   1.340   3.938  H8      ADQ  49  
ADQ  HN61    1HN6    H  0  0  N  N  N  36.689  55.337  89.673   4.724   0.274   8.930  HN61    ADQ  50  
ADQ  HN62    2HN6    H  0  0  N  N  N  36.402  53.715  89.550   4.562   1.110   7.482  HN62    ADQ  51  
ADQ  H2      H2      H  0  1  N  N  N  35.442  56.505  85.403   1.003  -2.334   9.304  H2      ADQ  52  
ADQ  "H1'"   "H1'"   H  0  1  N  N  N  29.944  44.647  88.480  -1.318   0.708  -5.691  "H1'"   ADQ  53  
ADQ  "H2'"   "H2'"   H  0  1  N  N  N  29.552  43.707  90.734  -0.472  -0.194  -7.852  "H2'"   ADQ  54  
ADQ  "H3'"   "H3'"   H  0  1  N  N  N  32.204  45.126  91.580   1.069  -2.156  -6.092  "H3'"   ADQ  55  
ADQ  "H4'"   "H4'"   H  0  1  N  N  N  31.398  42.238  91.755   2.106   0.104  -7.865  "H4'"   ADQ  56  
ADQ  "H5'"   "H5'"   H  0  1  N  N  N  33.385  43.632  89.838   1.922  -0.127  -4.827  "H5'"   ADQ  57  
ADQ  "H6'1"  "1H6'"  H  0  0  N  N  N  34.092  41.621  88.883   4.022   0.940  -5.602  "H6'1"  ADQ  58  
ADQ  "H6'2"  "2H6'"  H  0  0  N  N  N  33.532  40.926  90.326   3.078   2.057  -6.617  "H6'2"  ADQ  59  
ADQ  HO2A    "'HO2"  H  0  0  N  N  N  29.268  45.832  91.802  -2.237  -1.193  -6.783  HO2A    ADQ  60  
ADQ  HO3A    "'HO3"  H  0  0  N  N  N  31.581  44.294  93.661   0.346  -2.924  -8.127  HO3A    ADQ  61  
ADQ  "HO4'"  "'HO4"  H  0  0  N  N  N  33.840  41.860  91.961   3.463  -1.723  -7.597  "HO4'"  ADQ  62  
ADQ  "HO6'"  "'HO6"  H  0  0  N  N  N  32.516  39.869  88.425   3.638   2.958  -4.585  "HO6'"  ADQ  63  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ADQ  PB     O1B     DOUB  N  N   1  
ADQ  PB     O2B     SING  N  N   2  
ADQ  PB     O3B     SING  N  N   3  
ADQ  PB     O3A     SING  N  N   4  
ADQ  O2B    HOB2    SING  N  N   5  
ADQ  O3B    "C1'"   SING  N  N   6  
ADQ  PA     O1A     DOUB  N  N   7  
ADQ  PA     O2A     SING  N  N   8  
ADQ  PA     O3A     SING  N  N   9  
ADQ  PA     O5D     SING  N  N  10  
ADQ  O2A    HOA2    SING  N  N  11  
ADQ  O5D    C5D     SING  N  N  12  
ADQ  C5D    C4D     SING  N  N  13  
ADQ  C5D    "H5'1"  SING  N  N  14  
ADQ  C5D    "H5'2"  SING  N  N  15  
ADQ  C4D    O4D     SING  N  N  16  
ADQ  C4D    C3D     SING  N  N  17  
ADQ  C4D    H4D     SING  N  N  18  
ADQ  O4D    C1D     SING  N  N  19  
ADQ  C3D    O3D     SING  N  N  20  
ADQ  C3D    C2D     SING  N  N  21  
ADQ  C3D    H3D     SING  N  N  22  
ADQ  O3D    "HO3'"  SING  N  N  23  
ADQ  C2D    O2D     SING  N  N  24  
ADQ  C2D    C1D     SING  N  N  25  
ADQ  C2D    H2D     SING  N  N  26  
ADQ  O2D    "HO2'"  SING  N  N  27  
ADQ  C1D    N9      SING  N  N  28  
ADQ  C1D    H1D     SING  N  N  29  
ADQ  N9     C8      SING  Y  N  30  
ADQ  N9     C4      SING  Y  N  31  
ADQ  C8     N7      DOUB  Y  N  32  
ADQ  C8     H8      SING  N  N  33  
ADQ  N7     C5      SING  Y  N  34  
ADQ  C5     C6      SING  Y  N  35  
ADQ  C5     C4      DOUB  Y  N  36  
ADQ  C6     N6      SING  N  N  37  
ADQ  C6     N1      DOUB  Y  N  38  
ADQ  N6     HN61    SING  N  N  39  
ADQ  N6     HN62    SING  N  N  40  
ADQ  N1     C2      SING  Y  N  41  
ADQ  C2     N3      DOUB  Y  N  42  
ADQ  C2     H2      SING  N  N  43  
ADQ  N3     C4      SING  Y  N  44  
ADQ  "C1'"  "C2'"   SING  N  N  45  
ADQ  "C1'"  "O5'"   SING  N  N  46  
ADQ  "C1'"  "H1'"   SING  N  N  47  
ADQ  "C2'"  "C3'"   SING  N  N  48  
ADQ  "C2'"  "O2'"   SING  N  N  49  
ADQ  "C2'"  "H2'"   SING  N  N  50  
ADQ  "C3'"  "C4'"   SING  N  N  51  
ADQ  "C3'"  "O3'"   SING  N  N  52  
ADQ  "C3'"  "H3'"   SING  N  N  53  
ADQ  "C4'"  "C5'"   SING  N  N  54  
ADQ  "C4'"  "O4'"   SING  N  N  55  
ADQ  "C4'"  "H4'"   SING  N  N  56  
ADQ  "C5'"  "C6'"   SING  N  N  57  
ADQ  "C5'"  "O5'"   SING  N  N  58  
ADQ  "C5'"  "H5'"   SING  N  N  59  
ADQ  "C6'"  "O6'"   SING  N  N  60  
ADQ  "C6'"  "H6'1"  SING  N  N  61  
ADQ  "C6'"  "H6'2"  SING  N  N  62  
ADQ  "O2'"  HO2A    SING  N  N  63  
ADQ  "O3'"  HO3A    SING  N  N  64  
ADQ  "O4'"  "HO4'"  SING  N  N  65  
ADQ  "O6'"  "HO6'"  SING  N  N  66  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ADQ  SMILES            ACDLabs               10.04  "O=P(OC1OC(C(O)C(O)C1O)CO)(O)OP(=O)(O)OCC4OC(n2c3ncnc(N)c3nc2)C(O)C4O"  
ADQ  SMILES_CANONICAL  CACTVS                3.341  "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@](O)(=O)O[C@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4O)[C@@H](O)[C@H]3O"  
ADQ  SMILES            CACTVS                3.341  "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[CH]4O[CH](CO)[CH](O)[CH](O)[CH]4O)[CH](O)[CH]3O"  
ADQ  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@@](=O)(O)O[C@@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O)O)N"  
ADQ  SMILES            "OpenEye OEToolkits"  1.5.0  "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OC4C(C(C(C(O4)CO)O)O)O)O)O)N"  
ADQ  InChI             InChI                 1.03   "InChI=1S/C16H25N5O15P2/c17-13-7-14(19-3-18-13)21(4-20-7)15-11(26)9(24)6(33-15)2-32-37(28,29)36-38(30,31)35-16-12(27)10(25)8(23)5(1-22)34-16/h3-6,8-12,15-16,22-27H,1-2H2,(H,28,29)(H,30,31)(H2,17,18,19)/t5-,6-,8-,9-,10+,11-,12-,15-,16-/m1/s1"  
ADQ  InChIKey          InChI                 1.03   WFPZSXYXPSUOPY-ROYWQJLOSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ADQ  "SYSTEMATIC NAME"  ACDLabs               10.04  "[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl dihydrogen diphosphate (non-preferred name)"  
ADQ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] [(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] hydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ADQ  "Create component"   2000-04-06  RCSB  
ADQ  "Modify descriptor"  2011-06-04  RCSB  
ADQ  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     ADQ
_pdbx_chem_comp_synonyms.name        "ADENOSINE-5'-MONOPHOSPHATE GLUCOPYRANOSYL-MONOPHOSPHATE ESTER"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
